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The map label for this gene is noeA [H]

Identifier: 110632518

GI number: 110632518

Start: 189965

End: 191434

Strand: Direct

Name: noeA [H]

Synonym: Meso_0156

Alternate gene names: 110632518

Gene position: 189965-191434 (Clockwise)

Preceding gene: 110632517

Following gene: 110632525

Centisome position: 4.31

GC content: 60.48

Gene sequence:

>1470_bases
GTGAACGAACCGCGTCCGCTGCAAAAGGGGGCGACGGTCGCCATTGAAAGCCTGTCAGGAGTAGACACAACCCCGCAGGC
CATCGAGCGTGAGCCCGGCTCTTACCGCGATCGGAACGGAGCCGTCTTCTACGGGGACGGCCGGGTATTCCGGTATTTGA
GCGCGCAAGCGTTGGCCAACTGGCGCCTGCTTGAAGTGGCGCCGTTTTTTCAAGTGTTTAAGCGTGAGGGCCATGTAGTC
GATACCTGGACTGTCGATCCTGGTGCGGAAGGATTGGAACTCGGGCGCTGGGCGGGCGTGGTGGAGCATGCCCGCATGCC
CTTCATATCCTACCCCTATGAATGGTCTTTCGGCATGCTGAAGGATGCCGCGCTTCTGCATTTGGAACTGATGCGGGGCG
CCCTTTCCGCCGACATGATCCTCAAGGATTCTTCTGCCTATAACATCCAGTGGAACGGGGTTCGGCCGGTTTTCATCGAT
ATTCCTTCTTTCGAGCCGCTGAACAAAGGCGAACCGTGGGTAGGCTACCGTCAGTTTTGCGAGCTTTTTCTCTATCCCTT
GATGCTGCAGGCCTATAAGGGCGTGGATTTCCGTCCCTGGCTGCGGGGCCGTGTGGACGGCATTCCGGCGGAGGAGATGC
GGGCACTGATGTCTTCGCGCGACCTTCTCAGGCCCGGCGTGCTCCTGCATGTGGCCGCGCAAGCGGCCCTTCAGAAGCGG
TATTCCGGTGGCGGGCAGAATATGCGCGGCGCTCTTGCCGATGCAGGCTTCGGCAAAGCGTTGATTGAGCGCAATGTCGA
GAAGCTGTCCAGGCTCGTTGGCCGGCTGGAGCCCGCCAATACGAAGACGACCTGGGCGGACTACGACCGCACGCACTCCT
ATGATGACGCGGAGCTGAATAAGAAGATCGATTTCGTGCGCCGGTCGGCGGCAACCCGGCATTGGCGACTCGCATGGGAC
CTGGGCTGCAACACCGGCACGTTCTCGCGCATCGCTGCTGAGCACTCCGACTATGTCGTGGCCATGGACGGCGACTGGAT
GGCCATCGAGCACCTCTACCGGCGCGAGAAGGGCGCGGATCGGGCGAAGAATATCCTGCCCCTTGTGGTCAACCTTGCCG
ATGCTTCACCAAGCCAGGGCTGGCGCTGCGCAGAGAGAAAGGCCATCACCGAACGCGGCCGGCCGGAACTCACTCTCTGC
CTCGCCCTCGTCCATCACATCGTCATCTCAGCCAATATTCCGCTCGCGGATTTCATCAGCTGGCTGGCGGGGCTGGGAAC
ATCGCTGGTGATCGAATTTGTGGGCCGGGACGACGAGATGGTGAAGACGCTGCTCGCCAATAAGGACGATCAGTACGACG
ATTACCATCCTGATGTCTTCCGCGCGCTTCTGTCGGCTCACTTCGACATCCAAGCGGAGGAACCGCTCAAGGGAGGTAAG
CGGCACATCTATTTCGCGACCGCGAAATAG

Upstream 100 bases:

>100_bases
AGCTTTATTGGCATAAGTTTCTGGCGGCGATTGGCATCAGACGCGAGGCACAACCGGTCGAAGTCAAGGAAGATCCCTCC
AAAAACGTGCAGGCTGATAG

Downstream 100 bases:

>100_bases
CGCTTCCTAGGGGAGTGTGCCTCAAAACACCGCCGCGCCCTGATCTGCCGGTGAAACGATCTGACGGAAGCTTGCGAAGA
GCTCGCGCCCCATGCCGTAA

Product: NoeA host specific nodulation protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 489; Mature: 489

Protein sequence:

>489_residues
MNEPRPLQKGATVAIESLSGVDTTPQAIEREPGSYRDRNGAVFYGDGRVFRYLSAQALANWRLLEVAPFFQVFKREGHVV
DTWTVDPGAEGLELGRWAGVVEHARMPFISYPYEWSFGMLKDAALLHLELMRGALSADMILKDSSAYNIQWNGVRPVFID
IPSFEPLNKGEPWVGYRQFCELFLYPLMLQAYKGVDFRPWLRGRVDGIPAEEMRALMSSRDLLRPGVLLHVAAQAALQKR
YSGGGQNMRGALADAGFGKALIERNVEKLSRLVGRLEPANTKTTWADYDRTHSYDDAELNKKIDFVRRSAATRHWRLAWD
LGCNTGTFSRIAAEHSDYVVAMDGDWMAIEHLYRREKGADRAKNILPLVVNLADASPSQGWRCAERKAITERGRPELTLC
LALVHHIVISANIPLADFISWLAGLGTSLVIEFVGRDDEMVKTLLANKDDQYDDYHPDVFRALLSAHFDIQAEEPLKGGK
RHIYFATAK

Sequences:

>Translated_489_residues
MNEPRPLQKGATVAIESLSGVDTTPQAIEREPGSYRDRNGAVFYGDGRVFRYLSAQALANWRLLEVAPFFQVFKREGHVV
DTWTVDPGAEGLELGRWAGVVEHARMPFISYPYEWSFGMLKDAALLHLELMRGALSADMILKDSSAYNIQWNGVRPVFID
IPSFEPLNKGEPWVGYRQFCELFLYPLMLQAYKGVDFRPWLRGRVDGIPAEEMRALMSSRDLLRPGVLLHVAAQAALQKR
YSGGGQNMRGALADAGFGKALIERNVEKLSRLVGRLEPANTKTTWADYDRTHSYDDAELNKKIDFVRRSAATRHWRLAWD
LGCNTGTFSRIAAEHSDYVVAMDGDWMAIEHLYRREKGADRAKNILPLVVNLADASPSQGWRCAERKAITERGRPELTLC
LALVHHIVISANIPLADFISWLAGLGTSLVIEFVGRDDEMVKTLLANKDDQYDDYHPDVFRALLSAHFDIQAEEPLKGGK
RHIYFATAK
>Mature_489_residues
MNEPRPLQKGATVAIESLSGVDTTPQAIEREPGSYRDRNGAVFYGDGRVFRYLSAQALANWRLLEVAPFFQVFKREGHVV
DTWTVDPGAEGLELGRWAGVVEHARMPFISYPYEWSFGMLKDAALLHLELMRGALSADMILKDSSAYNIQWNGVRPVFID
IPSFEPLNKGEPWVGYRQFCELFLYPLMLQAYKGVDFRPWLRGRVDGIPAEEMRALMSSRDLLRPGVLLHVAAQAALQKR
YSGGGQNMRGALADAGFGKALIERNVEKLSRLVGRLEPANTKTTWADYDRTHSYDDAELNKKIDFVRRSAATRHWRLAWD
LGCNTGTFSRIAAEHSDYVVAMDGDWMAIEHLYRREKGADRAKNILPLVVNLADASPSQGWRCAERKAITERGRPELTLC
LALVHHIVISANIPLADFISWLAGLGTSLVIEFVGRDDEMVKTLLANKDDQYDDYHPDVFRALLSAHFDIQAEEPLKGGK
RHIYFATAK

Specific function: Not known; does not seem to participate in nod factor synthesis but required for nodulation on some specific Medicago species such as M.littoralis [H]

COG id: COG2264

COG function: function code J; Ribosomal protein L11 methylase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002877 [H]

Pfam domain/function: PF01728 FtsJ [H]

EC number: NA

Molecular weight: Translated: 55097; Mature: 55097

Theoretical pI: Translated: 7.00; Mature: 7.00

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNEPRPLQKGATVAIESLSGVDTTPQAIEREPGSYRDRNGAVFYGDGRVFRYLSAQALAN
CCCCCCCCCCCEEEEECCCCCCCCHHHHHCCCCCCCCCCCEEEEECCCEEEHHHHHHHHC
WRLLEVAPFFQVFKREGHVVDTWTVDPGAEGLELGRWAGVVEHARMPFISYPYEWSFGML
CEEEHHHHHHHHHHCCCCEEEEEECCCCCCCHHHHHHHHHHHHHCCCEEECCCCCCCHHH
KDAALLHLELMRGALSADMILKDSSAYNIQWNGVRPVFIDIPSFEPLNKGEPWVGYRQFC
HHHHHHHHHHHHHHHHHCEEEECCCEEEEEECCCCEEEEECCCCCCCCCCCCCCCHHHHH
ELFLYPLMLQAYKGVDFRPWLRGRVDGIPAEEMRALMSSRDLLRPGVLLHVAAQAALQKR
HHHHHHHHHHHHCCCCCCCHHHCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH
YSGGGQNMRGALADAGFGKALIERNVEKLSRLVGRLEPANTKTTWADYDRTHSYDDAELN
HCCCCCCCCHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHH
KKIDFVRRSAATRHWRLAWDLGCNTGTFSRIAAEHSDYVVAMDGDWMAIEHLYRREKGAD
HHHHHHHHHHCCCEEEEEEECCCCCCCHHHHHHCCCCEEEEECCCHHHHHHHHHHHCCCH
RAKNILPLVVNLADASPSQGWRCAERKAITERGRPELTLCLALVHHIVISANIPLADFIS
HHHCCEEEEEEECCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCHHHHHH
WLAGLGTSLVIEFVGRDDEMVKTLLANKDDQYDDYHPDVFRALLSAHFDIQAEEPLKGGK
HHHCCCHHEEHHHHCCCHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCC
RHIYFATAK
EEEEEEECC
>Mature Secondary Structure
MNEPRPLQKGATVAIESLSGVDTTPQAIEREPGSYRDRNGAVFYGDGRVFRYLSAQALAN
CCCCCCCCCCCEEEEECCCCCCCCHHHHHCCCCCCCCCCCEEEEECCCEEEHHHHHHHHC
WRLLEVAPFFQVFKREGHVVDTWTVDPGAEGLELGRWAGVVEHARMPFISYPYEWSFGML
CEEEHHHHHHHHHHCCCCEEEEEECCCCCCCHHHHHHHHHHHHHCCCEEECCCCCCCHHH
KDAALLHLELMRGALSADMILKDSSAYNIQWNGVRPVFIDIPSFEPLNKGEPWVGYRQFC
HHHHHHHHHHHHHHHHHCEEEECCCEEEEEECCCCEEEEECCCCCCCCCCCCCCCHHHHH
ELFLYPLMLQAYKGVDFRPWLRGRVDGIPAEEMRALMSSRDLLRPGVLLHVAAQAALQKR
HHHHHHHHHHHHCCCCCCCHHHCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH
YSGGGQNMRGALADAGFGKALIERNVEKLSRLVGRLEPANTKTTWADYDRTHSYDDAELN
HCCCCCCCCHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHH
KKIDFVRRSAATRHWRLAWDLGCNTGTFSRIAAEHSDYVVAMDGDWMAIEHLYRREKGAD
HHHHHHHHHHCCCEEEEEEECCCCCCCHHHHHHCCCCEEEEECCCHHHHHHHHHHHCCCH
RAKNILPLVVNLADASPSQGWRCAERKAITERGRPELTLCLALVHHIVISANIPLADFIS
HHHCCEEEEEEECCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCHHHHHH
WLAGLGTSLVIEFVGRDDEMVKTLLANKDDQYDDYHPDVFRALLSAHFDIQAEEPLKGGK
HHHCCCHHEEHHHHCCCHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCC
RHIYFATAK
EEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8801423; 11481432 [H]