| Definition | Mesorhizobium sp. BNC1, complete genome. |
|---|---|
| Accession | NC_008254 |
| Length | 4,412,446 |
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The map label for this gene is punA [H]
Identifier: 110632512
GI number: 110632512
Start: 183560
End: 184399
Strand: Reverse
Name: punA [H]
Synonym: Meso_0150
Alternate gene names: 110632512
Gene position: 184399-183560 (Counterclockwise)
Preceding gene: 110632513
Following gene: 110632510
Centisome position: 4.18
GC content: 62.5
Gene sequence:
>840_bases ATGCCAGAAAGCTTGCTCGAACGGCTCAATCGCGCTGATGGCTCGATCGCCGCGCGGGCTGGCCCACCGGTCGAGGTCGG TATCATCCTGGGCTCCGGTCTTGGGGATCTGGCTCAATCCGTCGACGACGCGGAGGTGATCCCATATACCGAGATCGAAG CCTTTCCGGTTCCAACCGCCCCCGGGCATAAAGGACAGCTCGTCATTGGCACTCTCCACGGGAGGCGGGTGGCGGTGATG CAAGGCCGGCTTCACCTCTATGAAGGTCGCAGCCCGCAGGACATCGCGCTTGGTCCTTATCTCCTCAAGCGGCTTGGCAG CGCCAGCCTCATCGTCACAAATGCCGCCAGCGGCCTTCATCCGGCATACCGGCCAGGGGACGTGATGCTGATTGAGGATC ACCTCAATTTCACCGGCCTCAATCCGCTTGTCGGCTCCAACAGCCCCGAGATCGGCCTGCGCTTTCCCGATATGTCGCGG GCCTATGATCCCGCCCTCCTCGATCTTGCAGAGGAAGCTGCAGAGCGAGCGCTCCAGCCAGTCCACAAGGGAATCTATGG AGGCATTCTCGGCCCTTCCCTGGAGACGCTTGCCGAGCGTCGCTTTTTACGCGCTTCCGGATGTGACGCCGTGGGGATGT CGACTGTTACGGAGGTCATCGCGGCGGTGCATGGCGGATTGCGCGTCATCGGCATTTCCGCGATCACCAATACCGCCGCC ATCGGAGACCGGCGCACGGACACGATCGAGGAGGCGCTGACCAGCGCGGCCAACTGCGCAGAGAAGATCGACGCTATTCT GCGGCAGCTCCTTCCACTCCTGCCGCATCATACTCGCTGA
Upstream 100 bases:
>100_bases TGGGCGAAGAGCGGCTGCAAAGACTCCTGGGCGAGGCCGTGGAAGCGGCCCGGCAGCGTTCCATAGAGCTTGGAAAGTAA TCTCCCGGGGAGAAGAGCCA
Downstream 100 bases:
>100_bases GGCAGGAGCTTCCCGAATTACGGGTTGCGCAGCGCCAACCCGGCAGCGATCCAGCCCACGCCGGCAAAGATCAGATCGAC GCCCAGGAAGATACCCAGCA
Product: inosine guanosine and xanthosine phosphorylase family protein
Products: NA
Alternate protein names: Inosine phosphorylase; Purine nucleoside phosphorylase I; PNP I; PU-NPase I [H]
Number of amino acids: Translated: 279; Mature: 278
Protein sequence:
>279_residues MPESLLERLNRADGSIAARAGPPVEVGIILGSGLGDLAQSVDDAEVIPYTEIEAFPVPTAPGHKGQLVIGTLHGRRVAVM QGRLHLYEGRSPQDIALGPYLLKRLGSASLIVTNAASGLHPAYRPGDVMLIEDHLNFTGLNPLVGSNSPEIGLRFPDMSR AYDPALLDLAEEAAERALQPVHKGIYGGILGPSLETLAERRFLRASGCDAVGMSTVTEVIAAVHGGLRVIGISAITNTAA IGDRRTDTIEEALTSAANCAEKIDAILRQLLPLLPHHTR
Sequences:
>Translated_279_residues MPESLLERLNRADGSIAARAGPPVEVGIILGSGLGDLAQSVDDAEVIPYTEIEAFPVPTAPGHKGQLVIGTLHGRRVAVM QGRLHLYEGRSPQDIALGPYLLKRLGSASLIVTNAASGLHPAYRPGDVMLIEDHLNFTGLNPLVGSNSPEIGLRFPDMSR AYDPALLDLAEEAAERALQPVHKGIYGGILGPSLETLAERRFLRASGCDAVGMSTVTEVIAAVHGGLRVIGISAITNTAA IGDRRTDTIEEALTSAANCAEKIDAILRQLLPLLPHHTR >Mature_278_residues PESLLERLNRADGSIAARAGPPVEVGIILGSGLGDLAQSVDDAEVIPYTEIEAFPVPTAPGHKGQLVIGTLHGRRVAVMQ GRLHLYEGRSPQDIALGPYLLKRLGSASLIVTNAASGLHPAYRPGDVMLIEDHLNFTGLNPLVGSNSPEIGLRFPDMSRA YDPALLDLAEEAAERALQPVHKGIYGGILGPSLETLAERRFLRASGCDAVGMSTVTEVIAAVHGGLRVIGISAITNTAAI GDRRTDTIEEALTSAANCAEKIDAILRQLLPLLPHHTR
Specific function: Cleavage of guanosine or inosine to respective bases and sugar-1-phosphate molecules [H]
COG id: COG0005
COG function: function code F; Purine nucleoside phosphorylase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the PNP/MTAP phosphorylase family [H]
Homologues:
Organism=Homo sapiens, GI157168362, Length=261, Percent_Identity=44.0613026819923, Blast_Score=199, Evalue=2e-51, Organism=Homo sapiens, GI47132622, Length=264, Percent_Identity=25, Blast_Score=67, Evalue=2e-11, Organism=Escherichia coli, GI1788746, Length=249, Percent_Identity=38.9558232931727, Blast_Score=159, Evalue=2e-40, Organism=Caenorhabditis elegans, GI17541190, Length=236, Percent_Identity=40.2542372881356, Blast_Score=167, Evalue=7e-42, Organism=Saccharomyces cerevisiae, GI6323238, Length=224, Percent_Identity=43.3035714285714, Blast_Score=159, Evalue=3e-40, Organism=Drosophila melanogaster, GI45552887, Length=286, Percent_Identity=40.2097902097902, Blast_Score=192, Evalue=2e-49, Organism=Drosophila melanogaster, GI45552885, Length=286, Percent_Identity=39.8601398601399, Blast_Score=191, Evalue=6e-49, Organism=Drosophila melanogaster, GI24656093, Length=260, Percent_Identity=41.1538461538462, Blast_Score=189, Evalue=1e-48, Organism=Drosophila melanogaster, GI24656090, Length=260, Percent_Identity=41.1538461538462, Blast_Score=189, Evalue=2e-48, Organism=Drosophila melanogaster, GI24762376, Length=221, Percent_Identity=35.2941176470588, Blast_Score=122, Evalue=3e-28,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011268 - InterPro: IPR000845 - InterPro: IPR011270 - InterPro: IPR001369 - InterPro: IPR018099 [H]
Pfam domain/function: PF01048 PNP_UDP_1 [H]
EC number: =2.4.2.1 [H]
Molecular weight: Translated: 29498; Mature: 29367
Theoretical pI: Translated: 5.81; Mature: 5.81
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPESLLERLNRADGSIAARAGPPVEVGIILGSGLGDLAQSVDDAEVIPYTEIEAFPVPTA CCHHHHHHHHHCCCCEEECCCCCEEEEEEEECCHHHHHHCCCCCCCCCCCCCCEECCCCC PGHKGQLVIGTLHGRRVAVMQGRLHLYEGRSPQDIALGPYLLKRLGSASLIVTNAASGLH CCCCCCEEEEECCCCEEEEEECCEEEECCCCCCCCCHHHHHHHHCCCCEEEEECCCCCCC PAYRPGDVMLIEDHLNFTGLNPLVGSNSPEIGLRFPDMSRAYDPALLDLAEEAAERALQP CCCCCCCEEEEECCCCCCCCCCCCCCCCCCCEEECCCCCCCCCHHHHHHHHHHHHHHHHH VHKGIYGGILGPSLETLAERRFLRASGCDAVGMSTVTEVIAAVHGGLRVIGISAITNTAA HHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCEEEEEEHHHHHHHH IGDRRTDTIEEALTSAANCAEKIDAILRQLLPLLPHHTR CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure PESLLERLNRADGSIAARAGPPVEVGIILGSGLGDLAQSVDDAEVIPYTEIEAFPVPTA CHHHHHHHHHCCCCEEECCCCCEEEEEEEECCHHHHHHCCCCCCCCCCCCCCEECCCCC PGHKGQLVIGTLHGRRVAVMQGRLHLYEGRSPQDIALGPYLLKRLGSASLIVTNAASGLH CCCCCCEEEEECCCCEEEEEECCEEEECCCCCCCCCHHHHHHHHCCCCEEEEECCCCCCC PAYRPGDVMLIEDHLNFTGLNPLVGSNSPEIGLRFPDMSRAYDPALLDLAEEAAERALQP CCCCCCCEEEEECCCCCCCCCCCCCCCCCCCEEECCCCCCCCCHHHHHHHHHHHHHHHHH VHKGIYGGILGPSLETLAERRFLRASGCDAVGMSTVTEVIAAVHGGLRVIGISAITNTAA HHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCEEEEEEHHHHHHHH IGDRRTDTIEEALTSAANCAEKIDAILRQLLPLLPHHTR CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 10537218; 8969508; 9384377; 1629150 [H]