Definition | Mesorhizobium sp. BNC1, complete genome. |
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Accession | NC_008254 |
Length | 4,412,446 |
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The map label for this gene is ybhG [C]
Identifier: 110632491
GI number: 110632491
Start: 158169
End: 159203
Strand: Direct
Name: ybhG [C]
Synonym: Meso_0129
Alternate gene names: 110632491
Gene position: 158169-159203 (Clockwise)
Preceding gene: 110632490
Following gene: 110632492
Centisome position: 3.58
GC content: 66.38
Gene sequence:
>1035_bases ATGACGCGTAAGCTGCCTCGCATTATCGCCCTTCTGGTGATTGTCGCGGGCGGCGCCGCAGCGGCTTGGTGGTACGACCT GCCTGCCCGTTTCGGCTGGACACATGCGGAGGAACCCGGGCTCACCCTCTACGGCAACGTCGATATCCGTCAGGTGCAAC TCGGCTTCCGTGTTGGCGGCCGTGTCTCGGAAATGCTGGTAGACGAGGGCGACCGCGTTGAGACTGGGCAATTGTTGGCT CGTCTCGATGACCGGACCTATGCGGATGCCGTGCGCGCCGCCGAAGCGCAGGTTGCAAGCCAGCAGGCCAATCTCGCCAA GCTTGAGGCCGGCCCGCGGCAGGCAGAGATCGCGCAGGCGCGGGCGACGCTCGCCGAGCAGACCTACAATCTGACCAATG CCGAGCAGGCTCTGGAGCGGGCGCGCCAGCTCAGGCCCGGTGGCGCCATCTCGCAGGCGGCGCTCGACCAGGCTCAGTCG GCCCGGGACATGGCATCGGCACGCGTGGACGCCGCGCAGGAAGCACTCCGCCTTCTCGAAGAAGGCACGCGCAAGGAAGA TATCGCGGCGGCGAAGGCAAGCCTGCAGGCGGCTGAAGCCAATCTCGCCTCTGCCAAGACCTCGCTCGGTGATACCGAGC TTCGCGCGTCCGCCGCCGGCGTGATCCTGTCGCGGGTGCGCGAGCCCGGTGCAATCCTCTCGCCGGGAGATGCCGCCTAT GTCCTCTCGCTCGACCGCCCGGTCTGGGTCAGGACCTATGTCGAGGAGCCGGATCTCGGCCGCATTCATCCCGGCTTGGC CGTCGAGGTCGTCACCGATAGCGCGCCGGAAAGACCCTATCGCGGTCAGATCGGCTTTATCTCACCTGTGGCGGAGTTCA CGCCGAAATCGGTCGAGACGCCAGAGCTTCGGACCGATCTCGTCTACCGCCTGCGCGTAATCGTGGAGGAGCCCGATCTC GGTCTGCGTCAGGGCATGCCCGTGACCGTGCGCCTGCTTGAACACGCCGGCACCATGACCTCGGCAACCGATTGA
Upstream 100 bases:
>100_bases CTGGCCCAGCTTGGGTGGGCAGGATTCGGCGAGGTGGAAACCAGGCAAGTGCAGCGCCTGGCCGCCGATCTCGTGGCCTC ACTTAATAAGGAGTCGCGCC
Downstream 100 bases:
>100_bases GGATAAGCCCATGGGCGAGGAATTCGTCCGCCTTTCCGATGTTACCAAGCGGTTCGGGAGCGCACCCCCCGCTCTCGACG CGGTGTCCGGCTCGATCCGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 344; Mature: 343
Protein sequence:
>344_residues MTRKLPRIIALLVIVAGGAAAAWWYDLPARFGWTHAEEPGLTLYGNVDIRQVQLGFRVGGRVSEMLVDEGDRVETGQLLA RLDDRTYADAVRAAEAQVASQQANLAKLEAGPRQAEIAQARATLAEQTYNLTNAEQALERARQLRPGGAISQAALDQAQS ARDMASARVDAAQEALRLLEEGTRKEDIAAAKASLQAAEANLASAKTSLGDTELRASAAGVILSRVREPGAILSPGDAAY VLSLDRPVWVRTYVEEPDLGRIHPGLAVEVVTDSAPERPYRGQIGFISPVAEFTPKSVETPELRTDLVYRLRVIVEEPDL GLRQGMPVTVRLLEHAGTMTSATD
Sequences:
>Translated_344_residues MTRKLPRIIALLVIVAGGAAAAWWYDLPARFGWTHAEEPGLTLYGNVDIRQVQLGFRVGGRVSEMLVDEGDRVETGQLLA RLDDRTYADAVRAAEAQVASQQANLAKLEAGPRQAEIAQARATLAEQTYNLTNAEQALERARQLRPGGAISQAALDQAQS ARDMASARVDAAQEALRLLEEGTRKEDIAAAKASLQAAEANLASAKTSLGDTELRASAAGVILSRVREPGAILSPGDAAY VLSLDRPVWVRTYVEEPDLGRIHPGLAVEVVTDSAPERPYRGQIGFISPVAEFTPKSVETPELRTDLVYRLRVIVEEPDL GLRQGMPVTVRLLEHAGTMTSATD >Mature_343_residues TRKLPRIIALLVIVAGGAAAAWWYDLPARFGWTHAEEPGLTLYGNVDIRQVQLGFRVGGRVSEMLVDEGDRVETGQLLAR LDDRTYADAVRAAEAQVASQQANLAKLEAGPRQAEIAQARATLAEQTYNLTNAEQALERARQLRPGGAISQAALDQAQSA RDMASARVDAAQEALRLLEEGTRKEDIAAAKASLQAAEANLASAKTSLGDTELRASAAGVILSRVREPGAILSPGDAAYV LSLDRPVWVRTYVEEPDLGRIHPGLAVEVVTDSAPERPYRGQIGFISPVAEFTPKSVETPELRTDLVYRLRVIVEEPDLG LRQGMPVTVRLLEHAGTMTSATD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Periplasm (Potential) [H]
Metaboloic importance: Non Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0194 family [H]
Homologues:
Organism=Escherichia coli, GI1787013, Length=315, Percent_Identity=48.2539682539683, Blast_Score=265, Evalue=3e-72, Organism=Escherichia coli, GI1789900, Length=315, Percent_Identity=27.6190476190476, Blast_Score=97, Evalue=1e-21, Organism=Escherichia coli, GI87081796, Length=335, Percent_Identity=26.2686567164179, Blast_Score=63, Evalue=4e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006143 - InterPro: IPR022936 [H]
Pfam domain/function: PF00529 HlyD [H]
EC number: NA
Molecular weight: Translated: 37091; Mature: 36960
Theoretical pI: Translated: 4.86; Mature: 4.86
Prosite motif: PS00037 MYB_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTRKLPRIIALLVIVAGGAAAAWWYDLPARFGWTHAEEPGLTLYGNVDIRQVQLGFRVGG CCCHHHHHHHHHHHHCCCCHHHHHHHCHHHCCCCCCCCCCEEEEECCEEEEEEECHHCCC RVSEMLVDEGDRVETGQLLARLDDRTYADAVRAAEAQVASQQANLAKLEAGPRQAEIAQA HHHHHHHCCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHH RATLAEQTYNLTNAEQALERARQLRPGGAISQAALDQAQSARDMASARVDAAQEALRLLE HHHHHHHHCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH EGTRKEDIAAAKASLQAAEANLASAKTSLGDTELRASAAGVILSRVREPGAILSPGDAAY CCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCEECCCCCEE VLSLDRPVWVRTYVEEPDLGRIHPGLAVEVVTDSAPERPYRGQIGFISPVAEFTPKSVET EEEECCCEEEEEECCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCHHHCCCCCCCC PELRTDLVYRLRVIVEEPDLGLRQGMPVTVRLLEHAGTMTSATD CHHHHHHHHHHHHEEECCCCCHHCCCCHHHHHHHHCCCCCCCCC >Mature Secondary Structure TRKLPRIIALLVIVAGGAAAAWWYDLPARFGWTHAEEPGLTLYGNVDIRQVQLGFRVGG CCHHHHHHHHHHHHCCCCHHHHHHHCHHHCCCCCCCCCCEEEEECCEEEEEEECHHCCC RVSEMLVDEGDRVETGQLLARLDDRTYADAVRAAEAQVASQQANLAKLEAGPRQAEIAQA HHHHHHHCCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHH RATLAEQTYNLTNAEQALERARQLRPGGAISQAALDQAQSARDMASARVDAAQEALRLLE HHHHHHHHCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH EGTRKEDIAAAKASLQAAEANLASAKTSLGDTELRASAAGVILSRVREPGAILSPGDAAY CCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCEECCCCCEE VLSLDRPVWVRTYVEEPDLGRIHPGLAVEVVTDSAPERPYRGQIGFISPVAEFTPKSVET EEEECCCEEEEEECCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCHHHCCCCCCCC PELRTDLVYRLRVIVEEPDLGLRQGMPVTVRLLEHAGTMTSATD CHHHHHHHHHHHHEEECCCCCHHCCCCHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11481431 [H]