| Definition | Helicobacter acinonychis str. Sheeba chromosome, complete genome. |
|---|---|
| Accession | NC_008229 |
| Length | 1,553,927 |
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The map label for this gene is gmhB [H]
Identifier: 109947748
GI number: 109947748
Start: 1059273
End: 1059794
Strand: Reverse
Name: gmhB [H]
Synonym: Hac_1223
Alternate gene names: 109947748
Gene position: 1059794-1059273 (Counterclockwise)
Preceding gene: 109947749
Following gene: 109947747
Centisome position: 68.2
GC content: 32.76
Gene sequence:
>522_bases ATGACCACTAACAAAGCCCTTTTTTTAGACAGAGACGGCATTATTAACATTGATAAAGGCTATGTGAGCCAAAAAGAAGA TTTTGAATTCCAAAAAGGGATTTTTGAATTGTTAAGGCATGCGAAATCTTTAGGCTATAAACTGCTTTTAATCACCAATC AATCTGGGATCAACCGAGGTTATTACACCCTTAAAGACTTTGAAAACCTTACCGCATATCTCCAAGAAAGCTTGCTTGAA GAATTAGGTTTTAATTTAGATGGTATTTATTTTTGCAGACACGCTCCAGAAGAAAATTGCACTTGCAGAAAGCCAAAACC TTATTTGATTTTACAGGCCGCTAAAGAGCATCAAATTTGTTTGGAAAAATCTTTTATGATAGGCGATAAAGAAAGCGATA TGTTAGCCGGCTTGAACGCTAAAGTTAAAAATAATCTCTTATTGAGTGCAAATTTTTTAAAAACTTCTCATTCTTGGATA CAATGTAAAAATCTTAAAGAGATGATTAATTGGATTAAATAA
Upstream 100 bases:
>100_bases GGGATCATGCTCATTAACCACCAAACACCCCATGTGATGCATCATCAAAACGGTGCAATGCACCACCAAAACGACACCAC ACCACACCAAGAAAGCCACC
Downstream 100 bases:
>100_bases GGATAATAATGCGTTATATTGATGATGAATTAGAAAATCAAACTATTTTAATTACCGGTGGGGCTGGTTTTGTGGGCAGT AATCTGGCCTTTTATTTTCA
Product: histinol phosphatase
Products: NA
Alternate protein names: D-glycero-D-manno-heptose 1,7-bisphosphate phosphatase [H]
Number of amino acids: Translated: 173; Mature: 172
Protein sequence:
>173_residues MTTNKALFLDRDGIINIDKGYVSQKEDFEFQKGIFELLRHAKSLGYKLLLITNQSGINRGYYTLKDFENLTAYLQESLLE ELGFNLDGIYFCRHAPEENCTCRKPKPYLILQAAKEHQICLEKSFMIGDKESDMLAGLNAKVKNNLLLSANFLKTSHSWI QCKNLKEMINWIK
Sequences:
>Translated_173_residues MTTNKALFLDRDGIINIDKGYVSQKEDFEFQKGIFELLRHAKSLGYKLLLITNQSGINRGYYTLKDFENLTAYLQESLLE ELGFNLDGIYFCRHAPEENCTCRKPKPYLILQAAKEHQICLEKSFMIGDKESDMLAGLNAKVKNNLLLSANFLKTSHSWI QCKNLKEMINWIK >Mature_172_residues TTNKALFLDRDGIINIDKGYVSQKEDFEFQKGIFELLRHAKSLGYKLLLITNQSGINRGYYTLKDFENLTAYLQESLLEE LGFNLDGIYFCRHAPEENCTCRKPKPYLILQAAKEHQICLEKSFMIGDKESDMLAGLNAKVKNNLLLSANFLKTSHSWIQ CKNLKEMINWIK
Specific function: Converts the D-glycero-beta-D-manno-heptose 1,7- bisphosphate intermediate into D-glycero-beta-D-manno-heptose 1- phosphate by removing the phosphate group at the C-7 position [H]
COG id: COG0241
COG function: function code E; Histidinol phosphatase and related phosphatases
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the gmhB family [H]
Homologues:
Organism=Escherichia coli, GI1786399, Length=151, Percent_Identity=42.3841059602649, Blast_Score=133, Evalue=5e-33, Organism=Escherichia coli, GI87082027, Length=135, Percent_Identity=31.1111111111111, Blast_Score=75, Evalue=2e-15,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR023214 - InterPro: IPR006549 - InterPro: IPR004446 - InterPro: IPR006543 - InterPro: IPR013954 [H]
Pfam domain/function: PF08645 PNK3P [H]
EC number: 3.1.1.-
Molecular weight: Translated: 20005; Mature: 19874
Theoretical pI: Translated: 8.20; Mature: 8.20
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.9 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 5.2 %Cys+Met (Translated Protein) 2.9 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTNKALFLDRDGIINIDKGYVSQKEDFEFQKGIFELLRHAKSLGYKLLLITNQSGINRG CCCCCEEEEECCCEEECCCCCCCCCCCCHHHHHHHHHHHHHHHCCEEEEEEECCCCCCCC YYTLKDFENLTAYLQESLLEELGFNLDGIYFCRHAPEENCTCRKPKPYLILQAAKEHQIC CEEHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCEEEEEECCCHHHH LEKSFMIGDKESDMLAGLNAKVKNNLLLSANFLKTSHSWIQCKNLKEMINWIK HHHHEECCCCCCHHHHCCCCHHCCCEEEEEHHHHCCCCCEEHHHHHHHHHHCC >Mature Secondary Structure TTNKALFLDRDGIINIDKGYVSQKEDFEFQKGIFELLRHAKSLGYKLLLITNQSGINRG CCCCEEEEECCCEEECCCCCCCCCCCCHHHHHHHHHHHHHHHCCEEEEEEECCCCCCCC YYTLKDFENLTAYLQESLLEELGFNLDGIYFCRHAPEENCTCRKPKPYLILQAAKEHQIC CEEHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCEEEEEECCCHHHH LEKSFMIGDKESDMLAGLNAKVKNNLLLSANFLKTSHSWIQCKNLKEMINWIK HHHHEECCCCCCHHHHCCCCHHCCCEEEEEHHHHCCCCCEEHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9923682; 12101286 [H]