| Definition | Helicobacter acinonychis str. Sheeba chromosome, complete genome. |
|---|---|
| Accession | NC_008229 |
| Length | 1,553,927 |
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The map label for this gene is waaE
Identifier: 109947746
GI number: 109947746
Start: 1056884
End: 1058275
Strand: Reverse
Name: waaE
Synonym: Hac_1221
Alternate gene names: 109947746
Gene position: 1058275-1056884 (Counterclockwise)
Preceding gene: 109947747
Following gene: 109947745
Centisome position: 68.1
GC content: 39.73
Gene sequence:
>1392_bases ATGAGAAAAATCTTAGTCATAGGGGATTTGATCGCTGATTATTATTTATGGGGGAAGAGCGAACGCCTTTCGCCTGAAGC CCCTGTGCCTATTTTAGAAGTCAAAAAAGAGAGCAAGAGTTTAGGCGGAGCGGCTAATGTGGCCAATAACCTCATCTCTT TAGGGGCTCAAGTCTTTTTATGTGGGGTAGTGGGCGATGATCTAGAGGGCAAGCATTTCATTAACGCTTTAAAAATAAGA GAGGTTGACACTTCAGGCGTTTTAATAGATAAAACCCGTTGCACCACACTCAAAACGCGCATTATCGTGCAAAACCAGCA AATCGTGCGCGTGGATAAGGAAATCAAAGATCCCTTAAACGCCGATTTAAGAAAGAACCTTTTAGACTTTGTCGCAGAAA AAATCCAAGAAATGGATGGGATTATTCTTTCAGATTACAATAAGGGCGTTTTAGATTTTAAGATCACTCAAACTATCATC GCATTAGCCAACAAACACTACAAGCTCATTTTATGCGACCCTAAAGGGAAAGATTATAGCAAATATTCCCATGCGAGTTT GATCACGCCTAATCGTTTTGAATTGGAGCAAGCGCTTCATTTGAAATTAGACGGCGATGCCAATTTATTGAAAGCGCTTC AAATCTTACAAGAAACTTACCATATTGCCATGCCTTTAGTTACTTTGAGCGAGCAAGGCATCGCTTTTTTAGAAAAAAAC GAGCTAATCAATTGCCCCACCATCGCTAAAGAAGTTTATGATGTAACTGGGGCTGGCGATACAGTGATCGCATCTTTAAC GCTCTCTTTATTGGAATCAAAAAATCTTAAAGAAGCTTGTGAGTTTGCCAATGCAGCAGCAGCTGTGGTGGTGGGTAAAA TGGGGAGTGCGTTAGCGAGTTTGGAAGAAATCGCTTTGATTTTAAACCAAACGCACCCTAAAATCCTTTCTTTAGAAAAG CTTTTAAACATTTTAGAGTATAATAAGCAAAAAGTCGTTTTCACCAATGGTTGTTTTGATATTCTCCATAAAGGGCATGC GAGTTATTTGCAAAAGGCTAAAGCTTTAGGGGATATTCTCATTGTAGGGTTAAATAGCGATGCTTCCATTAAAAGGCTTA AGGGGGATAAACGCCCCATAGTGGGCGAAAAAGACAGAGCGTTTCTTTTAGCGAGTTTGTCTTGCGTGGATTATATCGTG GTGTTTGAAGAAGACACGCCCATAGGATTGATTCAAGCCCTAAAGCCTGATATTTTAGTTAAGGGGGCGGACTATCTTGA TAAAGAAGTCATAGGGAGCGAGTTTGCTAAAGAAACTTGTTTGATGGCATTTGAAGAAGGGTATTCTACAAGTGCTATTA TAGAAAAAATTAAAAGGGCATACAATGATTAA
Upstream 100 bases:
>100_bases CTACTATTTTGGATTTAGATTACACCCCCTTATACGATTTAGAAAGCGGTATTAAGGATTATTTACCCCATATCTATACA ATTTTTGAAGGAGGGAACGC
Downstream 100 bases:
>100_bases TGATTTGATTAAAAAAGAATTTTTAGCCCATAAGGAAGCGTTAGAAAAAAGTTTAGAAAGTTTGGAAGAATCTTTGATCC AAAGCGTCCAACTTTTGATA
Product: ADP-heptose synthase
Products: NA
Alternate protein names: D-beta-D-heptose 7-phosphate kinase; D-beta-D-heptose 7-phosphotransferase; D-beta-D-heptose 1-phosphate adenosyltransferase
Number of amino acids: Translated: 463; Mature: 463
Protein sequence:
>463_residues MRKILVIGDLIADYYLWGKSERLSPEAPVPILEVKKESKSLGGAANVANNLISLGAQVFLCGVVGDDLEGKHFINALKIR EVDTSGVLIDKTRCTTLKTRIIVQNQQIVRVDKEIKDPLNADLRKNLLDFVAEKIQEMDGIILSDYNKGVLDFKITQTII ALANKHYKLILCDPKGKDYSKYSHASLITPNRFELEQALHLKLDGDANLLKALQILQETYHIAMPLVTLSEQGIAFLEKN ELINCPTIAKEVYDVTGAGDTVIASLTLSLLESKNLKEACEFANAAAAVVVGKMGSALASLEEIALILNQTHPKILSLEK LLNILEYNKQKVVFTNGCFDILHKGHASYLQKAKALGDILIVGLNSDASIKRLKGDKRPIVGEKDRAFLLASLSCVDYIV VFEEDTPIGLIQALKPDILVKGADYLDKEVIGSEFAKETCLMAFEEGYSTSAIIEKIKRAYND
Sequences:
>Translated_463_residues MRKILVIGDLIADYYLWGKSERLSPEAPVPILEVKKESKSLGGAANVANNLISLGAQVFLCGVVGDDLEGKHFINALKIR EVDTSGVLIDKTRCTTLKTRIIVQNQQIVRVDKEIKDPLNADLRKNLLDFVAEKIQEMDGIILSDYNKGVLDFKITQTII ALANKHYKLILCDPKGKDYSKYSHASLITPNRFELEQALHLKLDGDANLLKALQILQETYHIAMPLVTLSEQGIAFLEKN ELINCPTIAKEVYDVTGAGDTVIASLTLSLLESKNLKEACEFANAAAAVVVGKMGSALASLEEIALILNQTHPKILSLEK LLNILEYNKQKVVFTNGCFDILHKGHASYLQKAKALGDILIVGLNSDASIKRLKGDKRPIVGEKDRAFLLASLSCVDYIV VFEEDTPIGLIQALKPDILVKGADYLDKEVIGSEFAKETCLMAFEEGYSTSAIIEKIKRAYND >Mature_463_residues MRKILVIGDLIADYYLWGKSERLSPEAPVPILEVKKESKSLGGAANVANNLISLGAQVFLCGVVGDDLEGKHFINALKIR EVDTSGVLIDKTRCTTLKTRIIVQNQQIVRVDKEIKDPLNADLRKNLLDFVAEKIQEMDGIILSDYNKGVLDFKITQTII ALANKHYKLILCDPKGKDYSKYSHASLITPNRFELEQALHLKLDGDANLLKALQILQETYHIAMPLVTLSEQGIAFLEKN ELINCPTIAKEVYDVTGAGDTVIASLTLSLLESKNLKEACEFANAAAAVVVGKMGSALASLEEIALILNQTHPKILSLEK LLNILEYNKQKVVFTNGCFDILHKGHASYLQKAKALGDILIVGLNSDASIKRLKGDKRPIVGEKDRAFLLASLSCVDYIV VFEEDTPIGLIQALKPDILVKGADYLDKEVIGSEFAKETCLMAFEEGYSTSAIIEKIKRAYND
Specific function: Catalyzes the ADP transfer to D-glycero-D-manno-heptose 1-phosphate, yielding ADP-D,D-heptose
COG id: COG2870
COG function: function code M; ADP-heptose synthase, bifunctional sugar kinase/adenylyltransferase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: In the C-terminal section; belongs to the cytidylyltransferase family
Homologues:
Organism=Escherichia coli, GI1789432, Length=471, Percent_Identity=42.0382165605096, Blast_Score=321, Evalue=7e-89,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): HLDE_HELAH (Q17WK1)
Other databases:
- EMBL: AM260522 - RefSeq: YP_664974.1 - ProteinModelPortal: Q17WK1 - SMR: Q17WK1 - STRING: Q17WK1 - GeneID: 4176636 - GenomeReviews: AM260522_GR - KEGG: hac:Hac_1221 - NMPDR: fig|382638.8.peg.1186 - eggNOG: COG2870 - HOGENOM: HBG545535 - OMA: LTPNRKE - PhylomeDB: Q17WK1 - ProtClustDB: CLSK496243 - BioCyc: HACI382638:HAC_1221-MONOMER - HAMAP: MF_01603 - InterPro: IPR023030 - InterPro: IPR011611 - InterPro: IPR002173 - InterPro: IPR004821 - InterPro: IPR004820 - InterPro: IPR011913 - InterPro: IPR011914 - InterPro: IPR014729 - Gene3D: G3DSA:3.40.50.620 - TIGRFAMs: TIGR00125 - TIGRFAMs: TIGR02198 - TIGRFAMs: TIGR02199
Pfam domain/function: PF01467 CTP_transf_2; PF00294 PfkB
EC number: 2.7.-.-
Molecular weight: Translated: 51013; Mature: 51013
Theoretical pI: Translated: 6.14; Mature: 6.14
Prosite motif: PS00583 PFKB_KINASES_1; PS00584 PFKB_KINASES_2
Important sites: ACT_SITE 260-260
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRKILVIGDLIADYYLWGKSERLSPEAPVPILEVKKESKSLGGAANVANNLISLGAQVFL CCEEEEEHHHHHHHHHCCCCCCCCCCCCCCHHHHCHHHHHCCCHHHHHHHHHHHCHHEEE CGVVGDDLEGKHFINALKIREVDTSGVLIDKTRCTTLKTRIIVQNQQIVRVDKEIKDPLN EEECCCCCCCHHHHHHEEEEEECCCCEEEECCCCCEEEEEEEECCCHHEECCHHHCCCCC ADLRKNLLDFVAEKIQEMDGIILSDYNKGVLDFKITQTIIALANKHYKLILCDPKGKDYS HHHHHHHHHHHHHHHHHHCCEEEECCCCCEEEEHHHHHHHHHHCCCEEEEEECCCCCCCC KYSHASLITPNRFELEQALHLKLDGDANLLKALQILQETYHIAMPLVTLSEQGIAFLEKN CCCCCCCCCCCHHHHCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHEEECCCCCEEEECC ELINCPTIAKEVYDVTGAGDTVIASLTLSLLESKNLKEACEFANAAAAVVVGKMGSALAS CCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH LEEIALILNQTHPKILSLEKLLNILEYNKQKVVFTNGCFDILHKGHASYLQKAKALGDIL HHHHHHHHCCCCCHHHHHHHHHHHHHCCCCEEEEECCHHHHHHCCHHHHHHHHHHCCCEE IVGLNSDASIKRLKGDKRPIVGEKDRAFLLASLSCVDYIVVFEEDTPIGLIQALKPDILV EEEECCCCHHHHHCCCCCCCCCCCCCCCEEEECCCEEEEEEEECCCCHHHHHHCCCCEEE KGADYLDKEVIGSEFAKETCLMAFEEGYSTSAIIEKIKRAYND ECCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCC >Mature Secondary Structure MRKILVIGDLIADYYLWGKSERLSPEAPVPILEVKKESKSLGGAANVANNLISLGAQVFL CCEEEEEHHHHHHHHHCCCCCCCCCCCCCCHHHHCHHHHHCCCHHHHHHHHHHHCHHEEE CGVVGDDLEGKHFINALKIREVDTSGVLIDKTRCTTLKTRIIVQNQQIVRVDKEIKDPLN EEECCCCCCCHHHHHHEEEEEECCCCEEEECCCCCEEEEEEEECCCHHEECCHHHCCCCC ADLRKNLLDFVAEKIQEMDGIILSDYNKGVLDFKITQTIIALANKHYKLILCDPKGKDYS HHHHHHHHHHHHHHHHHHCCEEEECCCCCEEEEHHHHHHHHHHCCCEEEEEECCCCCCCC KYSHASLITPNRFELEQALHLKLDGDANLLKALQILQETYHIAMPLVTLSEQGIAFLEKN CCCCCCCCCCCHHHHCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHEEECCCCCEEEECC ELINCPTIAKEVYDVTGAGDTVIASLTLSLLESKNLKEACEFANAAAAVVVGKMGSALAS CCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH LEEIALILNQTHPKILSLEKLLNILEYNKQKVVFTNGCFDILHKGHASYLQKAKALGDIL HHHHHHHHCCCCCHHHHHHHHHHHHHCCCCEEEEECCHHHHHHCCHHHHHHHHHHCCCEE IVGLNSDASIKRLKGDKRPIVGEKDRAFLLASLSCVDYIVVFEEDTPIGLIQALKPDILV EEEECCCCHHHHHCCCCCCCCCCCCCCCEEEECCCEEEEEEEECCCCHHHHHHCCCCEEE KGADYLDKEVIGSEFAKETCLMAFEEGYSTSAIIEKIKRAYND ECCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA