| Definition | Helicobacter acinonychis str. Sheeba chromosome, complete genome. |
|---|---|
| Accession | NC_008229 |
| Length | 1,553,927 |
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The map label for this gene is folE
Identifier: 109947622
GI number: 109947622
Start: 941850
End: 942392
Strand: Reverse
Name: folE
Synonym: Hac_1087
Alternate gene names: 109947622
Gene position: 942392-941850 (Counterclockwise)
Preceding gene: 109947623
Following gene: 109947621
Centisome position: 60.65
GC content: 35.54
Gene sequence:
>543_bases ATGGAAAATTTTTTCAACCAATTTTTTGAAAACATCGGCGAAGATAAGAATAGAGAAGGTTTGAAAAACACGCCTAAAAG AGTTCAAGAATTATGGAATTTCTTGTATAAAGGCTATAAAGAAGACCCTAAAGTGGCTTTAAAAAGTGCGTATTTTCAAG GCGTTTGCGATGAAATGATAGTGGCTCAACACATTGAATTTTACTCCACTTGCGAGCATCATTTACTCCCTTTTTTTGGG AATATTAGCTTAGGTTATATTCCTAAAGAAAAGATTATCGGCATTAGTGCGATCGCTAAACTCATTGAAATTTATAGCAA ACGCTTACAAATCCAAGAAAGATTGACCACTCAAATTGCAGAAACCTTTGATGAAATCATAGAGCCAAGGGGCGTGATAG TGATTTGTGAGGCCAAACATTTGTGCATGAGCATGCAAGGGGTGCAAAAGCAAAATGCGATCATTAAAACAAGTGCGTTA AAAGGCCTATTCAAAAAAGACCCTAAAACTAGAGCTGAATTTATGCAACTCTTAAAATCTTAG
Upstream 100 bases:
>100_bases TAGCACCCGATCAGCGGCTTATCTTTTTAACGCTGAAATGTTTAGCACCCACCCTAGCATTAAAAATCGTATCCAATCTT TATCAAGGCGCGCTCTTTAA
Downstream 100 bases:
>100_bases GCTATAATTCTATGCATGAATAACCCTAATTTATCCTTTTATTATAACGAGTGCGAGCGTTTTGAAAGCTTTTTAAAAAA CCATCGTCTACACCTTGAAA
Product: GTP cyclohydrolase I
Products: NA
Alternate protein names: GTP cyclohydrolase I; GTP-CH-I
Number of amino acids: Translated: 180; Mature: 180
Protein sequence:
>180_residues MENFFNQFFENIGEDKNREGLKNTPKRVQELWNFLYKGYKEDPKVALKSAYFQGVCDEMIVAQHIEFYSTCEHHLLPFFG NISLGYIPKEKIIGISAIAKLIEIYSKRLQIQERLTTQIAETFDEIIEPRGVIVICEAKHLCMSMQGVQKQNAIIKTSAL KGLFKKDPKTRAEFMQLLKS
Sequences:
>Translated_180_residues MENFFNQFFENIGEDKNREGLKNTPKRVQELWNFLYKGYKEDPKVALKSAYFQGVCDEMIVAQHIEFYSTCEHHLLPFFG NISLGYIPKEKIIGISAIAKLIEIYSKRLQIQERLTTQIAETFDEIIEPRGVIVICEAKHLCMSMQGVQKQNAIIKTSAL KGLFKKDPKTRAEFMQLLKS >Mature_180_residues MENFFNQFFENIGEDKNREGLKNTPKRVQELWNFLYKGYKEDPKVALKSAYFQGVCDEMIVAQHIEFYSTCEHHLLPFFG NISLGYIPKEKIIGISAIAKLIEIYSKRLQIQERLTTQIAETFDEIIEPRGVIVICEAKHLCMSMQGVQKQNAIIKTSAL KGLFKKDPKTRAEFMQLLKS
Specific function: Tetrahydrofolate biosynthesis; first step. [C]
COG id: COG0302
COG function: function code H; GTP cyclohydrolase I
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the GTP cyclohydrolase I family
Homologues:
Organism=Homo sapiens, GI66932968, Length=176, Percent_Identity=44.8863636363636, Blast_Score=181, Evalue=3e-46, Organism=Homo sapiens, GI4503949, Length=176, Percent_Identity=44.8863636363636, Blast_Score=181, Evalue=3e-46, Organism=Homo sapiens, GI66932970, Length=134, Percent_Identity=42.5373134328358, Blast_Score=130, Evalue=5e-31, Organism=Homo sapiens, GI66932972, Length=134, Percent_Identity=42.5373134328358, Blast_Score=130, Evalue=6e-31, Organism=Escherichia coli, GI1788476, Length=168, Percent_Identity=32.1428571428571, Blast_Score=103, Evalue=9e-24, Organism=Caenorhabditis elegans, GI17560486, Length=178, Percent_Identity=45.5056179775281, Blast_Score=184, Evalue=2e-47, Organism=Saccharomyces cerevisiae, GI6321706, Length=172, Percent_Identity=46.5116279069767, Blast_Score=167, Evalue=7e-43, Organism=Drosophila melanogaster, GI24656782, Length=180, Percent_Identity=44.4444444444444, Blast_Score=168, Evalue=2e-42, Organism=Drosophila melanogaster, GI24656796, Length=180, Percent_Identity=44.4444444444444, Blast_Score=168, Evalue=2e-42, Organism=Drosophila melanogaster, GI24656791, Length=180, Percent_Identity=44.4444444444444, Blast_Score=168, Evalue=2e-42,
Paralogues:
None
Copy number: 420 Molecules/Cell In: Growth-Phase, Minimal-Media (Based on E. coli). [C]
Swissprot (AC and ID): GCH1_HELAH (Q17WX5)
Other databases:
- EMBL: AM260522 - RefSeq: YP_664850.1 - ProteinModelPortal: Q17WX5 - SMR: Q17WX5 - STRING: Q17WX5 - GeneID: 4177511 - GenomeReviews: AM260522_GR - KEGG: hac:Hac_1087 - NMPDR: fig|382638.8.peg.1056 - eggNOG: COG0302 - HOGENOM: HBG370191 - OMA: IQERLTT - PhylomeDB: Q17WX5 - ProtClustDB: PRK09347 - BioCyc: HACI382638:HAC_1087-MONOMER - GO: GO:0005737 - HAMAP: MF_00223 - InterPro: IPR001474 - InterPro: IPR020602 - InterPro: IPR018234 - TIGRFAMs: TIGR00063
Pfam domain/function: PF01227 GTP_cyclohydroI
EC number: =3.5.4.16
Molecular weight: Translated: 20842; Mature: 20842
Theoretical pI: Translated: 8.60; Mature: 8.60
Prosite motif: PS00859 GTP_CYCLOHYDROL_1_1; PS00860 GTP_CYCLOHYDROL_1_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 5.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MENFFNQFFENIGEDKNREGLKNTPKRVQELWNFLYKGYKEDPKVALKSAYFQGVCDEMI CCHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHH VAQHIEFYSTCEHHLLPFFGNISLGYIPKEKIIGISAIAKLIEIYSKRLQIQERLTTQIA HHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ETFDEIIEPRGVIVICEAKHLCMSMQGVQKQNAIIKTSALKGLFKKDPKTRAEFMQLLKS HHHHHHHCCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHC >Mature Secondary Structure MENFFNQFFENIGEDKNREGLKNTPKRVQELWNFLYKGYKEDPKVALKSAYFQGVCDEMI CCHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHH VAQHIEFYSTCEHHLLPFFGNISLGYIPKEKIIGISAIAKLIEIYSKRLQIQERLTTQIA HHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ETFDEIIEPRGVIVICEAKHLCMSMQGVQKQNAIIKTSALKGLFKKDPKTRAEFMQLLKS HHHHHHHCCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA