| Definition | Helicobacter acinonychis str. Sheeba chromosome, complete genome. |
|---|---|
| Accession | NC_008229 |
| Length | 1,553,927 |
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The map label for this gene is surE
Identifier: 109947620
GI number: 109947620
Start: 940123
End: 940926
Strand: Reverse
Name: surE
Synonym: Hac_1085
Alternate gene names: 109947620
Gene position: 940926-940123 (Counterclockwise)
Preceding gene: 109947621
Following gene: 109947619
Centisome position: 60.55
GC content: 38.68
Gene sequence:
>804_bases ATGAAAAAAATTTTACTCACTAACGATGATGGCTATCATGCAAAAGGCATTAAAGCTTTAGAACAAGCCCTAGAGAAGAT GGCAGAAATTTATGTGGTCGCCCCCAAGCATGAAAAAAGTGCATGTTCGCAATGCATCACTATCACCACGCCTTTAAGAG CCGAGAAAATTAAGGGCAAAGAAGGTAGGCATTATAGGATTGATGATGGCACGCCAAGCGATTGCGTGTATTTGGCTATC AATGAGCTGTTTAAACATGTCTCTTTTGATTTAGTGATTTCAGGGATCAATCTTGGATCTAACATGGGCGAAGACACGAT TTATTCTGGAACGGTAGCCGGAGCGATTGAAGGCACTATCCAAGGCGTGCCTTCCATTGCGATTTCTCAAATCCTTTCTA ACAAAAATAAAAACACTCCCTTAAGTTTTGATCTAGCTCAAAAGATTATCCAAGATCTAGTCCAAAACATTTTCACCAAA GGCTATCCTTTAAAAGGACGCAAACTCTTAAATGTGAATATCCCTAATTGCTCCTTACAAGAATATAAGGGTGAATGCAT CACCCCTAAAGGCTATAGAGTGTATAAAAAAGAAGTGCATAGGCGCACAGACCCTAAAAATGAAAGCTATTTTTGGCTAG GATTACACCCTTTAGAATGGCAAAAGCGTGAAAATGAAGAAAGATTCTCTGATTTTGACGCTGTTGTTTCAAATCATGTC TCTATCACGCCTTTAAATTTGGATTTAACGAGTTATAGTGATTTGAAAAGCTTGGAATCTTGGCATAGGGGAATGTTAAA GTGA
Upstream 100 bases:
>100_bases AAACAGAGATTTTAAACGATTTGAATGCATTAAAACCCACTCATATTTTGTTGAAAGAAAATTTGAACATATTGTTAAAC ACTCTATTTAAAGGCAAAAC
Downstream 100 bases:
>100_bases GTAAAAATTACCGCTTGACTTTTTTAGGGCTACTTGTTGGGGTTCTTTTTTTCTTTAGTGCGTGTGAGTACCGCTTGCAT ATGGGGTATTATTCAGAAGT
Product: stationary phase survival protein SurE
Products: NA
Alternate protein names: Nucleoside 5'-monophosphate phosphohydrolase
Number of amino acids: Translated: 267; Mature: 267
Protein sequence:
>267_residues MKKILLTNDDGYHAKGIKALEQALEKMAEIYVVAPKHEKSACSQCITITTPLRAEKIKGKEGRHYRIDDGTPSDCVYLAI NELFKHVSFDLVISGINLGSNMGEDTIYSGTVAGAIEGTIQGVPSIAISQILSNKNKNTPLSFDLAQKIIQDLVQNIFTK GYPLKGRKLLNVNIPNCSLQEYKGECITPKGYRVYKKEVHRRTDPKNESYFWLGLHPLEWQKRENEERFSDFDAVVSNHV SITPLNLDLTSYSDLKSLESWHRGMLK
Sequences:
>Translated_267_residues MKKILLTNDDGYHAKGIKALEQALEKMAEIYVVAPKHEKSACSQCITITTPLRAEKIKGKEGRHYRIDDGTPSDCVYLAI NELFKHVSFDLVISGINLGSNMGEDTIYSGTVAGAIEGTIQGVPSIAISQILSNKNKNTPLSFDLAQKIIQDLVQNIFTK GYPLKGRKLLNVNIPNCSLQEYKGECITPKGYRVYKKEVHRRTDPKNESYFWLGLHPLEWQKRENEERFSDFDAVVSNHV SITPLNLDLTSYSDLKSLESWHRGMLK >Mature_267_residues MKKILLTNDDGYHAKGIKALEQALEKMAEIYVVAPKHEKSACSQCITITTPLRAEKIKGKEGRHYRIDDGTPSDCVYLAI NELFKHVSFDLVISGINLGSNMGEDTIYSGTVAGAIEGTIQGVPSIAISQILSNKNKNTPLSFDLAQKIIQDLVQNIFTK GYPLKGRKLLNVNIPNCSLQEYKGECITPKGYRVYKKEVHRRTDPKNESYFWLGLHPLEWQKRENEERFSDFDAVVSNHV SITPLNLDLTSYSDLKSLESWHRGMLK
Specific function: Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates
COG id: COG0496
COG function: function code R; Predicted acid phosphatase
Gene ontology:
Cell location: Cytoplasm (Potential)
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the surE nucleotidase family
Homologues:
Organism=Escherichia coli, GI1789101, Length=259, Percent_Identity=36.2934362934363, Blast_Score=164, Evalue=8e-42,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): SURE_HELAH (Q17WX7)
Other databases:
- EMBL: AM260522 - RefSeq: YP_664848.1 - ProteinModelPortal: Q17WX7 - SMR: Q17WX7 - STRING: Q17WX7 - GeneID: 4177464 - GenomeReviews: AM260522_GR - KEGG: hac:Hac_1085 - NMPDR: fig|382638.8.peg.1054 - eggNOG: COG0496 - HOGENOM: HBG600532 - OMA: NGFYYVN - PhylomeDB: Q17WX7 - ProtClustDB: PRK00346 - BioCyc: HACI382638:HAC_1085-MONOMER - GO: GO:0005737 - HAMAP: MF_00060 - InterPro: IPR002828 - Gene3D: G3DSA:3.40.1210.10 - TIGRFAMs: TIGR00087
Pfam domain/function: PF01975 SurE; SSF64167 SurE-like_Pase/nucleotidase
EC number: =3.1.3.5
Molecular weight: Translated: 30102; Mature: 30102
Theoretical pI: Translated: 8.44; Mature: 8.44
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKILLTNDDGYHAKGIKALEQALEKMAEIYVVAPKHEKSACSQCITITTPLRAEKIKGK CCEEEEECCCCCCHHHHHHHHHHHHHHHHEEEECCCCCHHHHHCEEEEECCCHHHHCCCC EGRHYRIDDGTPSDCVYLAINELFKHVSFDLVISGINLGSNMGEDTIYSGTVAGAIEGTI CCCEEECCCCCCCCEEHHHHHHHHHHCCEEEEEEECCCCCCCCCCCEECCCCHHHHHHHH QGVPSIAISQILSNKNKNTPLSFDLAQKIIQDLVQNIFTKGYPLKGRKLLNVNIPNCSLQ CCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCHH EYKGECITPKGYRVYKKEVHRRTDPKNESYFWLGLHPLEWQKRENEERFSDFDAVVSNHV HHCCCEECCCCCHHHHHHHHHCCCCCCCCEEEEECCCCCHHHHCCHHHHHHHHHHHHCCE SITPLNLDLTSYSDLKSLESWHRGMLK EEEEEEEECCCCHHHHHHHHHHHCCCC >Mature Secondary Structure MKKILLTNDDGYHAKGIKALEQALEKMAEIYVVAPKHEKSACSQCITITTPLRAEKIKGK CCEEEEECCCCCCHHHHHHHHHHHHHHHHEEEECCCCCHHHHHCEEEEECCCHHHHCCCC EGRHYRIDDGTPSDCVYLAINELFKHVSFDLVISGINLGSNMGEDTIYSGTVAGAIEGTI CCCEEECCCCCCCCEEHHHHHHHHHHCCEEEEEEECCCCCCCCCCCEECCCCHHHHHHHH QGVPSIAISQILSNKNKNTPLSFDLAQKIIQDLVQNIFTKGYPLKGRKLLNVNIPNCSLQ CCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCHH EYKGECITPKGYRVYKKEVHRRTDPKNESYFWLGLHPLEWQKRENEERFSDFDAVVSNHV HHCCCEECCCCCHHHHHHHHHCCCCCCCCEEEEECCCCCHHHHCCHHHHHHHHHHHHCCE SITPLNLDLTSYSDLKSLESWHRGMLK EEEEEEEECCCCHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA