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The map label for this gene is queD [H]

Identifier: 109947612

GI number: 109947612

Start: 934315

End: 934917

Strand: Reverse

Name: queD [H]

Synonym: Hac_1077

Alternate gene names: 109947612

Gene position: 934917-934315 (Counterclockwise)

Preceding gene: 109947613

Following gene: 109947611

Centisome position: 60.16

GC content: 36.15

Gene sequence:

>603_bases
ATGATTATCAGGCGATTGTATAAATTTTGCGCTAGCCATGTGGTGCGTAATTGTTCCTCTTTAAAATGCGCTCAAAATAT
CCATGGGCATAATTATGAAGTGGAAGTCTTTATTGAAACTAACCGCTTAGATCATGCGAACATGGCACTAGATTTTGGAT
TGATGCAACAAGAAATGCAAACCTTTATAGACTCCTTTGATCATGCCCATCATTTTTGGGATAAAGAAAGTATTGAATTC
CAGCGTTTTATAGAAAATCATTGCGTGCGTTATGTGAAATGCTCGTTTAATTTGAGTGCAGAGAGTTACGCTCTTATGTT
TTTATACTACCTTTCACGCATTTTACAAAAAAGCGTTTTTTCTAATCATGAAGGGGAGTTAAAAGTCTCTAGCGTGCGCG
TGCATGAGACGAAAAACGGCTACGCTGAAAGCTTTTTAAAAGATTTAGAAAACCCCCACTTTAAAACTTTAGTGTATCAA
AATTGCGTCTCTTTTTCACAAGGCATTCAAAGCTTGTGGCAAGACAAGGACTTTTTTAATAAAATCATTAGCGATGAAGA
AAAATGCTTTTTTCACGCTAAACCCTTACACCAAATCCCTTAA

Upstream 100 bases:

>100_bases
GATTAGAAGCACGATCAAACGCATTGATTTCAACCGCCCTGAACGCTACTACTACAACTTAAGGTTACCTCTTTATCAGC
CATGTTATAAGCAATGAACA

Downstream 100 bases:

>100_bases
ATGAAACTCCCAGTCGTTGAGAGCTTTTTTTCCTTACAAGGTGAAGGCCAAAGGATAGGCAAGCCCAGTCTTTTTTTGCG
TTTGGGGGGGTGTAACCTTT

Product: hypothetical protein

Products: NA

Alternate protein names: CPH4 synthase; Queuosine biosynthesis protein queD [H]

Number of amino acids: Translated: 200; Mature: 200

Protein sequence:

>200_residues
MIIRRLYKFCASHVVRNCSSLKCAQNIHGHNYEVEVFIETNRLDHANMALDFGLMQQEMQTFIDSFDHAHHFWDKESIEF
QRFIENHCVRYVKCSFNLSAESYALMFLYYLSRILQKSVFSNHEGELKVSSVRVHETKNGYAESFLKDLENPHFKTLVYQ
NCVSFSQGIQSLWQDKDFFNKIISDEEKCFFHAKPLHQIP

Sequences:

>Translated_200_residues
MIIRRLYKFCASHVVRNCSSLKCAQNIHGHNYEVEVFIETNRLDHANMALDFGLMQQEMQTFIDSFDHAHHFWDKESIEF
QRFIENHCVRYVKCSFNLSAESYALMFLYYLSRILQKSVFSNHEGELKVSSVRVHETKNGYAESFLKDLENPHFKTLVYQ
NCVSFSQGIQSLWQDKDFFNKIISDEEKCFFHAKPLHQIP
>Mature_200_residues
MIIRRLYKFCASHVVRNCSSLKCAQNIHGHNYEVEVFIETNRLDHANMALDFGLMQQEMQTFIDSFDHAHHFWDKESIEF
QRFIENHCVRYVKCSFNLSAESYALMFLYYLSRILQKSVFSNHEGELKVSSVRVHETKNGYAESFLKDLENPHFKTLVYQ
NCVSFSQGIQSLWQDKDFFNKIISDEEKCFFHAKPLHQIP

Specific function: Catalyzes the conversion of 7,8-dihydroneopterin triphosphate (H2NTP) to 6-carboxy-5,6,7,8-tetrahydropterin (CPH4) and acetaldehyde [H]

COG id: COG0720

COG function: function code H; 6-pyruvoyl-tetrahydropterin synthase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the PTPS family. QueD subfamily [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007115 [H]

Pfam domain/function: PF01242 PTPS [H]

EC number: NA

Molecular weight: Translated: 23719; Mature: 23719

Theoretical pI: Translated: 6.98; Mature: 6.98

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.5 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
6.0 %Cys+Met (Translated Protein)
3.5 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
6.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIIRRLYKFCASHVVRNCSSLKCAQNIHGHNYEVEVFIETNRLDHANMALDFGLMQQEMQ
CHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCCHHHHHHHHHHHHHHH
TFIDSFDHAHHFWDKESIEFQRFIENHCVRYVKCSFNLSAESYALMFLYYLSRILQKSVF
HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHEECCCCHHHHHHHHHHHHHHHHHHHHH
SNHEGELKVSSVRVHETKNGYAESFLKDLENPHFKTLVYQNCVSFSQGIQSLWQDKDFFN
CCCCCCEEEEEEEEECCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHH
KIISDEEKCFFHAKPLHQIP
HHHCCCHHEEEECCCCCCCC
>Mature Secondary Structure
MIIRRLYKFCASHVVRNCSSLKCAQNIHGHNYEVEVFIETNRLDHANMALDFGLMQQEMQ
CHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCCHHHHHHHHHHHHHHH
TFIDSFDHAHHFWDKESIEFQRFIENHCVRYVKCSFNLSAESYALMFLYYLSRILQKSVF
HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHEECCCCHHHHHHHHHHHHHHHHHHHHH
SNHEGELKVSSVRVHETKNGYAESFLKDLENPHFKTLVYQNCVSFSQGIQSLWQDKDFFN
CCCCCCEEEEEEEEECCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHH
KIISDEEKCFFHAKPLHQIP
HHHCCCHHEEEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9923682 [H]