| Definition | Helicobacter acinonychis str. Sheeba chromosome, complete genome. |
|---|---|
| Accession | NC_008229 |
| Length | 1,553,927 |
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The map label for this gene is fragment 2
Identifier: 109947250
GI number: 109947250
Start: 591623
End: 591946
Strand: Direct
Name: fragment 2
Synonym: Hac_0675
Alternate gene names: NA
Gene position: 591623-591946 (Clockwise)
Preceding gene: 109947249
Following gene: 109947251
Centisome position: 38.07
GC content: 39.2
Gene sequence:
>324_bases ATGAATGGTGCTTTTGGAGTGAGTTTAGATGACTCTATAGCCACAACATTAATCACAGGATTGTTAGGCGTAACCGCTGT TGCACAAGTAGGGAGAACGCTCGTTAATGGTTTCCTTAAATTCATCCCTATTTTTGGGAGTGTTGCAGGGAGTGCAACCG CTGTCGCTACCACAGAAGGCATTGGGTTTGCGTATTTGAAAGTGCTAGAAAAATGCTTTAATGATGAGACGGTTGAAGTC AATTTGCCTGAAGTTAGCATGATAGCTTCTCTCTTTAAGGAGAATTATTTCAGTTTGGATATAATCAAAAAATTGAAACA ATAA
Upstream 100 bases:
>100_bases TTCATACTGCATCAGGTACTGCAGGAGCGGTTGGGCTTATCCCTATACCTTTTAGCGATGCACTTGCTATTGCGCCATTC AAGCAGGAATGATCTATAAA
Downstream 100 bases:
>100_bases GATTAGGGGTTATGAAAAACGCATGGCATTAGACAAAAGGATTTGGATGCATTTTGATCTTTTACCTTTTATGTTTATCA TCCCCTTGCTTGTGGTTTCT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 107; Mature: 107
Protein sequence:
>107_residues MNGAFGVSLDDSIATTLITGLLGVTAVAQVGRTLVNGFLKFIPIFGSVAGSATAVATTEGIGFAYLKVLEKCFNDETVEV NLPEVSMIASLFKENYFSLDIIKKLKQ
Sequences:
>Translated_107_residues MNGAFGVSLDDSIATTLITGLLGVTAVAQVGRTLVNGFLKFIPIFGSVAGSATAVATTEGIGFAYLKVLEKCFNDETVEV NLPEVSMIASLFKENYFSLDIIKKLKQ >Mature_107_residues MNGAFGVSLDDSIATTLITGLLGVTAVAQVGRTLVNGFLKFIPIFGSVAGSATAVATTEGIGFAYLKVLEKCFNDETVEV NLPEVSMIASLFKENYFSLDIIKKLKQ
Specific function: Unknown
COG id: COG3597
COG function: function code S; Uncharacterized protein/domain associated with GTPases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 11351; Mature: 11351
Theoretical pI: Translated: 4.65; Mature: 4.65
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNGAFGVSLDDSIATTLITGLLGVTAVAQVGRTLVNGFLKFIPIFGSVAGSATAVATTEG CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCC IGFAYLKVLEKCFNDETVEVNLPEVSMIASLFKENYFSLDIIKKLKQ CHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHCCCCHHHHHHHHCC >Mature Secondary Structure MNGAFGVSLDDSIATTLITGLLGVTAVAQVGRTLVNGFLKFIPIFGSVAGSATAVATTEG CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCC IGFAYLKVLEKCFNDETVEVNLPEVSMIASLFKENYFSLDIIKKLKQ CHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHCCCCHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA