Definition Helicobacter acinonychis str. Sheeba chromosome, complete genome.
Accession NC_008229
Length 1,553,927

Click here to switch to the map view.

The map label for this gene is fragment 2

Identifier: 109947250

GI number: 109947250

Start: 591623

End: 591946

Strand: Direct

Name: fragment 2

Synonym: Hac_0675

Alternate gene names: NA

Gene position: 591623-591946 (Clockwise)

Preceding gene: 109947249

Following gene: 109947251

Centisome position: 38.07

GC content: 39.2

Gene sequence:

>324_bases
ATGAATGGTGCTTTTGGAGTGAGTTTAGATGACTCTATAGCCACAACATTAATCACAGGATTGTTAGGCGTAACCGCTGT
TGCACAAGTAGGGAGAACGCTCGTTAATGGTTTCCTTAAATTCATCCCTATTTTTGGGAGTGTTGCAGGGAGTGCAACCG
CTGTCGCTACCACAGAAGGCATTGGGTTTGCGTATTTGAAAGTGCTAGAAAAATGCTTTAATGATGAGACGGTTGAAGTC
AATTTGCCTGAAGTTAGCATGATAGCTTCTCTCTTTAAGGAGAATTATTTCAGTTTGGATATAATCAAAAAATTGAAACA
ATAA

Upstream 100 bases:

>100_bases
TTCATACTGCATCAGGTACTGCAGGAGCGGTTGGGCTTATCCCTATACCTTTTAGCGATGCACTTGCTATTGCGCCATTC
AAGCAGGAATGATCTATAAA

Downstream 100 bases:

>100_bases
GATTAGGGGTTATGAAAAACGCATGGCATTAGACAAAAGGATTTGGATGCATTTTGATCTTTTACCTTTTATGTTTATCA
TCCCCTTGCTTGTGGTTTCT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 107; Mature: 107

Protein sequence:

>107_residues
MNGAFGVSLDDSIATTLITGLLGVTAVAQVGRTLVNGFLKFIPIFGSVAGSATAVATTEGIGFAYLKVLEKCFNDETVEV
NLPEVSMIASLFKENYFSLDIIKKLKQ

Sequences:

>Translated_107_residues
MNGAFGVSLDDSIATTLITGLLGVTAVAQVGRTLVNGFLKFIPIFGSVAGSATAVATTEGIGFAYLKVLEKCFNDETVEV
NLPEVSMIASLFKENYFSLDIIKKLKQ
>Mature_107_residues
MNGAFGVSLDDSIATTLITGLLGVTAVAQVGRTLVNGFLKFIPIFGSVAGSATAVATTEGIGFAYLKVLEKCFNDETVEV
NLPEVSMIASLFKENYFSLDIIKKLKQ

Specific function: Unknown

COG id: COG3597

COG function: function code S; Uncharacterized protein/domain associated with GTPases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 11351; Mature: 11351

Theoretical pI: Translated: 4.65; Mature: 4.65

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNGAFGVSLDDSIATTLITGLLGVTAVAQVGRTLVNGFLKFIPIFGSVAGSATAVATTEG
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCC
IGFAYLKVLEKCFNDETVEVNLPEVSMIASLFKENYFSLDIIKKLKQ
CHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHCCCCHHHHHHHHCC
>Mature Secondary Structure
MNGAFGVSLDDSIATTLITGLLGVTAVAQVGRTLVNGFLKFIPIFGSVAGSATAVATTEG
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCC
IGFAYLKVLEKCFNDETVEVNLPEVSMIASLFKENYFSLDIIKKLKQ
CHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHCCCCHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA