| Definition | Helicobacter acinonychis str. Sheeba chromosome, complete genome. |
|---|---|
| Accession | NC_008229 |
| Length | 1,553,927 |
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The map label for this gene is 109947188
Identifier: 109947188
GI number: 109947188
Start: 533854
End: 534861
Strand: Direct
Name: 109947188
Synonym: Hac_0606
Alternate gene names: NA
Gene position: 533854-534861 (Clockwise)
Preceding gene: 109947187
Following gene: 109947189
Centisome position: 34.36
GC content: 34.13
Gene sequence:
>1008_bases ATGCGATTAGGGGTGAATGAAGCGGTAGAGTTGAGTTTGGGCGAATTGCAAAACACGCCCTCAATCAGCTATTTTAATTC TATTGTTTTGTCTTTAAACAAGGTGCAAAAAGGCTCTTTATTTGCCGCTAAAGATCATGCATTCATTCCTAAAGCTTTAG AATTAGGGGCTTATGGGATTTTATACACAGGAGAGTATCCTTTAAGCGATAGAGATGTGGCATGGATCAAGCTTAAAGAC ATAGAGCATTCTTTGAATCATTTGTTTAAATTTTGTTTGTTGAATGAGCGTGTGGTTGGAGTGTTATTAAGTCCTATAGA ATTAGAGATCGCTTCTAAAATTATAGTGAGCGAATTTGTGTGGTGTTTGAAAGAGAGTCTTGAAGATTTATTCATTTTAG AGGGGTGTAAAATAGCGTTTTTTGATAGATTGGAGTGGCTTCATTTGTTTTATAAGCAAGAGCGTTTAGAAGAAGACTTA AAAGAAAGCGATTTGATTGTTCTTAACCAATCCTTTTTTTGCAGCGCTTTAGTTTATGAAAAACAAGAGCATGAATTAAA GATGCCATGCATCTTTTTAGAGCCTTTAAAAAGGGTGATCCGATTGTGCGAGAAATTAAAAATTGAATTTGACTTGAATC TTTTAGGTAAAAAAGAATATTTTTTAGATCATTGCAAACCCTTTTTTGTGAATAAAAATTTAGAAATAGCTCCTTATGGG ACAACAGCAAGGGTGATTGTCGCTGAGAGTTCAAAAGAATTGTTTGAAATGCTGCTTCAAAAAGCCCTTGAGACTTTATC GTGGGGGAAAATTGTCGTGTTTTATCGTAAAAATAGCGTGGTTTTTTTTGAAAAAGCCAACTCTTATTTTTACACCACTC AAAACAATTTAAAAGAGCAATTAAAAAATTTAGCGTTTAATTTCGCTTTTATTTATGGGATTAGCCCCAATCATTTAGAA TCCCTTTTAAACCCCCCTCTTTTTAAAAAAACCCCCACGCTATGGTAA
Upstream 100 bases:
>100_bases CGAAATGAGTGAGGGCATGATTTTAGCGGTGCGAGATAATGACAGTTTGGCCTTAATTAGCCCCACAAAAGAAAAAACCG CAGGAAGTCTCATTAGCTAA
Downstream 100 bases:
>100_bases GTCATGCTTATTTGTAACGATAACCTCAATCAAAAAACCCTTTTAGAAGAAATCATGGCGTTAAGGCCATGGCGTAAAGG TCCTTTTGAAATTTCTAAGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 335; Mature: 335
Protein sequence:
>335_residues MRLGVNEAVELSLGELQNTPSISYFNSIVLSLNKVQKGSLFAAKDHAFIPKALELGAYGILYTGEYPLSDRDVAWIKLKD IEHSLNHLFKFCLLNERVVGVLLSPIELEIASKIIVSEFVWCLKESLEDLFILEGCKIAFFDRLEWLHLFYKQERLEEDL KESDLIVLNQSFFCSALVYEKQEHELKMPCIFLEPLKRVIRLCEKLKIEFDLNLLGKKEYFLDHCKPFFVNKNLEIAPYG TTARVIVAESSKELFEMLLQKALETLSWGKIVVFYRKNSVVFFEKANSYFYTTQNNLKEQLKNLAFNFAFIYGISPNHLE SLLNPPLFKKTPTLW
Sequences:
>Translated_335_residues MRLGVNEAVELSLGELQNTPSISYFNSIVLSLNKVQKGSLFAAKDHAFIPKALELGAYGILYTGEYPLSDRDVAWIKLKD IEHSLNHLFKFCLLNERVVGVLLSPIELEIASKIIVSEFVWCLKESLEDLFILEGCKIAFFDRLEWLHLFYKQERLEEDL KESDLIVLNQSFFCSALVYEKQEHELKMPCIFLEPLKRVIRLCEKLKIEFDLNLLGKKEYFLDHCKPFFVNKNLEIAPYG TTARVIVAESSKELFEMLLQKALETLSWGKIVVFYRKNSVVFFEKANSYFYTTQNNLKEQLKNLAFNFAFIYGISPNHLE SLLNPPLFKKTPTLW >Mature_335_residues MRLGVNEAVELSLGELQNTPSISYFNSIVLSLNKVQKGSLFAAKDHAFIPKALELGAYGILYTGEYPLSDRDVAWIKLKD IEHSLNHLFKFCLLNERVVGVLLSPIELEIASKIIVSEFVWCLKESLEDLFILEGCKIAFFDRLEWLHLFYKQERLEEDL KESDLIVLNQSFFCSALVYEKQEHELKMPCIFLEPLKRVIRLCEKLKIEFDLNLLGKKEYFLDHCKPFFVNKNLEIAPYG TTARVIVAESSKELFEMLLQKALETLSWGKIVVFYRKNSVVFFEKANSYFYTTQNNLKEQLKNLAFNFAFIYGISPNHLE SLLNPPLFKKTPTLW
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 38905; Mature: 38905
Theoretical pI: Translated: 6.41; Mature: 6.41
Prosite motif: PS00284 SERPIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRLGVNEAVELSLGELQNTPSISYFNSIVLSLNKVQKGSLFAAKDHAFIPKALELGAYGI CCCCCCHHHHEEHHHCCCCCCHHHHHHHHHHHHHCCCCCEEEECCCCCCCHHHHCCCEEE LYTGEYPLSDRDVAWIKLKDIEHSLNHLFKFCLLNERVVGVLLSPIELEIASKIIVSEFV EEECCCCCCCCCEEEEEEHHHHHHHHHHHHHHHHCCHHHHHHCCCHHHHHHHHHHHHHHH WCLKESLEDLFILEGCKIAFFDRLEWLHLFYKQERLEEDLKESDLIVLNQSFFCSALVYE HHHHHHHHHEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHC KQEHELKMPCIFLEPLKRVIRLCEKLKIEFDLNLLGKKEYFLDHCKPFFVNKNLEIAPYG CCCCCCCCCEEHHHHHHHHHHHHHHCEEEEEEEECCCHHHHHHCCCEEEECCCEEEEECC TTARVIVAESSKELFEMLLQKALETLSWGKIVVFYRKNSVVFFEKANSYFYTTQNNLKEQ CEEEEEEECCHHHHHHHHHHHHHHHCCCCEEEEEEECCCEEEEEECCCEEEECHHHHHHH LKNLAFNFAFIYGISPNHLESLLNPPLFKKTPTLW HHHHHEEEEEEEECCHHHHHHHHCCCCCCCCCCCC >Mature Secondary Structure MRLGVNEAVELSLGELQNTPSISYFNSIVLSLNKVQKGSLFAAKDHAFIPKALELGAYGI CCCCCCHHHHEEHHHCCCCCCHHHHHHHHHHHHHCCCCCEEEECCCCCCCHHHHCCCEEE LYTGEYPLSDRDVAWIKLKDIEHSLNHLFKFCLLNERVVGVLLSPIELEIASKIIVSEFV EEECCCCCCCCCEEEEEEHHHHHHHHHHHHHHHHCCHHHHHHCCCHHHHHHHHHHHHHHH WCLKESLEDLFILEGCKIAFFDRLEWLHLFYKQERLEEDLKESDLIVLNQSFFCSALVYE HHHHHHHHHEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHC KQEHELKMPCIFLEPLKRVIRLCEKLKIEFDLNLLGKKEYFLDHCKPFFVNKNLEIAPYG CCCCCCCCCEEHHHHHHHHHHHHHHCEEEEEEEECCCHHHHHHCCCEEEECCCEEEEECC TTARVIVAESSKELFEMLLQKALETLSWGKIVVFYRKNSVVFFEKANSYFYTTQNNLKEQ CEEEEEEECCHHHHHHHHHHHHHHHCCCCEEEEEEECCCEEEEEECCCEEEECHHHHHHH LKNLAFNFAFIYGISPNHLESLLNPPLFKKTPTLW HHHHHEEEEEEEECCHHHHHHHHCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA