Click here to switch to the map view.

The map label for this gene is exbB [C]

Identifier: 109947171

GI number: 109947171

Start: 515900

End: 516490

Strand: Direct

Name: exbB [C]

Synonym: Hac_0584

Alternate gene names: 109947171

Gene position: 515900-516490 (Clockwise)

Preceding gene: 109947170

Following gene: 109947172

Centisome position: 33.2

GC content: 40.44

Gene sequence:

>591_bases
ATGTTATATGCAATCGTTGATTTTTTTCATAAGAGCGGTTTTGTTACGGCGTTGGTTTTGATTTGGGTTTCATTCTACTT
GGTGGTGACTCTATGGATCTTTTTGTATAAAAGTATTGTGTTGAAAATTGAACTCAAGCGCGAGATGCAATCTTTGTCCA
ACATTCTTAATGGGGTGCAAGACGCTCCAGAGCATTCCATGTTTAACAAGAGGAAAAACCATGGGCCTCAAAGGCATTCC
AAAGAATTGTTGCAAGCTTGGAAACATCAGATTCTTAAGCAAAGCACGACCGGTTTAGTGGTGTTGAGCATCATCTCTTC
TACGGCTCCTTTTATCGGTTTGTTTGGCACGGTGGTTGAGATTTTAGAAGCGTTTAATAGTTTGGGCGTGTTAGGTCAGG
CGTCTTTTGGGGTGATCGCACCTATTATTTCTAAAGCTCTTGTCGCCACTGCTGGGGGGATTTTAGCGGCCATTCCGGCT
TATTCTTTTTACTTGATTTTAAAGCGCAAGATCTATGACCTATCAGTTTATGTGCAAATGCAAGTGGATATTTTATCGTC
TAGAGAAGAGGATTCTTTAAGAAGATTTTGA

Upstream 100 bases:

>100_bases
TGCTATTTCTAGGGCTAAAAGGCTTTTAGAGGACGCAAGCTCTGATAGGTTAGCGGTTTCTAGCGTGCTGGCTAAGATTG
AGTCTCTTTAGGGGGAAACC

Downstream 100 bases:

>100_bases
CAAGTGTCTTAAATAGGGAGAGGTTTTTATGAATTACGATAATTATTGGGATGAGGACAAGCCAGAACTCAATATCACGC
CTTTAGTGGATGTGATGCTT

Product: biopolymer transport protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 196; Mature: 196

Protein sequence:

>196_residues
MLYAIVDFFHKSGFVTALVLIWVSFYLVVTLWIFLYKSIVLKIELKREMQSLSNILNGVQDAPEHSMFNKRKNHGPQRHS
KELLQAWKHQILKQSTTGLVVLSIISSTAPFIGLFGTVVEILEAFNSLGVLGQASFGVIAPIISKALVATAGGILAAIPA
YSFYLILKRKIYDLSVYVQMQVDILSSREEDSLRRF

Sequences:

>Translated_196_residues
MLYAIVDFFHKSGFVTALVLIWVSFYLVVTLWIFLYKSIVLKIELKREMQSLSNILNGVQDAPEHSMFNKRKNHGPQRHS
KELLQAWKHQILKQSTTGLVVLSIISSTAPFIGLFGTVVEILEAFNSLGVLGQASFGVIAPIISKALVATAGGILAAIPA
YSFYLILKRKIYDLSVYVQMQVDILSSREEDSLRRF
>Mature_196_residues
MLYAIVDFFHKSGFVTALVLIWVSFYLVVTLWIFLYKSIVLKIELKREMQSLSNILNGVQDAPEHSMFNKRKNHGPQRHS
KELLQAWKHQILKQSTTGLVVLSIISSTAPFIGLFGTVVEILEAFNSLGVLGQASFGVIAPIISKALVATAGGILAAIPA
YSFYLILKRKIYDLSVYVQMQVDILSSREEDSLRRF

Specific function: Involved In The Tonb-Dependent Energy-Dependent Transport Of Various Receptor-Bound Substrates. Protects Exbd From Proteolytic Degradation And Functionally Stabilizes Tonb. [C]

COG id: COG0811

COG function: function code U; Biopolymer transport proteins

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the exbB/tolQ family [H]

Homologues:

Organism=Escherichia coli, GI1789381, Length=212, Percent_Identity=30.188679245283, Blast_Score=72, Evalue=3e-14,
Organism=Escherichia coli, GI1786958, Length=199, Percent_Identity=27.1356783919598, Blast_Score=69, Evalue=2e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017269
- InterPro:   IPR002898 [H]

Pfam domain/function: PF01618 MotA_ExbB [H]

EC number: NA

Molecular weight: Translated: 22006; Mature: 22006

Theoretical pI: Translated: 10.04; Mature: 10.04

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLYAIVDFFHKSGFVTALVLIWVSFYLVVTLWIFLYKSIVLKIELKREMQSLSNILNGVQ
CHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DAPEHSMFNKRKNHGPQRHSKELLQAWKHQILKQSTTGLVVLSIISSTAPFIGLFGTVVE
CCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCHHHHHHHHHHH
ILEAFNSLGVLGQASFGVIAPIISKALVATAGGILAAIPAYSFYLILKRKIYDLSVYVQM
HHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEE
QVDILSSREEDSLRRF
HHHHHCCCCHHHHCCC
>Mature Secondary Structure
MLYAIVDFFHKSGFVTALVLIWVSFYLVVTLWIFLYKSIVLKIELKREMQSLSNILNGVQ
CHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DAPEHSMFNKRKNHGPQRHSKELLQAWKHQILKQSTTGLVVLSIISSTAPFIGLFGTVVE
CCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCHHHHHHHHHHH
ILEAFNSLGVLGQASFGVIAPIISKALVATAGGILAAIPAYSFYLILKRKIYDLSVYVQM
HHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEE
QVDILSSREEDSLRRF
HHHHHCCCCHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9923682 [H]