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The map label for this gene is atpC

Identifier: 109947170

GI number: 109947170

Start: 515519

End: 515890

Strand: Direct

Name: atpC

Synonym: Hac_0583

Alternate gene names: 109947170

Gene position: 515519-515890 (Clockwise)

Preceding gene: 109947169

Following gene: 109947171

Centisome position: 33.18

GC content: 44.35

Gene sequence:

>372_bases
ATGGCTTTATTGAAAATTAGTGTGGTCGTTCCTGAGGGGGAAGTTTATACAGGAGAGGTTAGAAGCGTTGTGTTGCCAGG
AGTTGAAGGGGAATTTGGGGTTCTTTATGGGCATAGCAACATGATCACTTTGCTCCAAGCGGGAGTGATTGAGATTGAAA
CCGAGAGTCAAAAAGAACACATTGCGATTAGTTGGGGCTATGCAGAAGTCACTGGTGAGCATGTGGATATTTTGGCCGAT
GGAGCGGTCTTTATCAAAAAAGAATCAGATGACAGAGATGATGCTATTTCTAGGGCTAAAAGGCTTTTAGAGGACGCAAG
CTCTGATAGGTTAGCGGTTTCTAGCGTGCTGGCTAAGATTGAGTCTCTTTAG

Upstream 100 bases:

>100_bases
TAAATACGATCATATCCCTGAAAACGCATTCTACATGGTGGGTAGCATTCAAGAGGTTTTAGAAAAAGCTAAAAGCATGA
AAAATTCCTAAGGGTTTGTC

Downstream 100 bases:

>100_bases
GGGGAAACCATGTTATATGCAATCGTTGATTTTTTTCATAAGAGCGGTTTTGTTACGGCGTTGGTTTTGATTTGGGTTTC
ATTCTACTTGGTGGTGACTC

Product: F0F1 ATP synthase subunit epsilon

Products: ADP; phosphate; H+

Alternate protein names: ATP synthase F1 sector epsilon subunit; F-ATPase epsilon subunit

Number of amino acids: Translated: 123; Mature: 122

Protein sequence:

>123_residues
MALLKISVVVPEGEVYTGEVRSVVLPGVEGEFGVLYGHSNMITLLQAGVIEIETESQKEHIAISWGYAEVTGEHVDILAD
GAVFIKKESDDRDDAISRAKRLLEDASSDRLAVSSVLAKIESL

Sequences:

>Translated_123_residues
MALLKISVVVPEGEVYTGEVRSVVLPGVEGEFGVLYGHSNMITLLQAGVIEIETESQKEHIAISWGYAEVTGEHVDILAD
GAVFIKKESDDRDDAISRAKRLLEDASSDRLAVSSVLAKIESL
>Mature_122_residues
ALLKISVVVPEGEVYTGEVRSVVLPGVEGEFGVLYGHSNMITLLQAGVIEIETESQKEHIAISWGYAEVTGEHVDILADG
AVFIKKESDDRDDAISRAKRLLEDASSDRLAVSSVLAKIESL

Specific function: Produces ATP from ADP in the presence of a proton gradient across the membrane

COG id: COG0355

COG function: function code C; F0F1-type ATP synthase, epsilon subunit (mitochondrial delta subunit)

Gene ontology:

Cell location: Cell inner membrane; Peripheral membrane protein

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ATPase epsilon chain family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): ATPE_HELAH (Q17Y77)

Other databases:

- EMBL:   AM260522
- RefSeq:   YP_664398.1
- ProteinModelPortal:   Q17Y77
- SMR:   Q17Y77
- STRING:   Q17Y77
- GeneID:   4177104
- GenomeReviews:   AM260522_GR
- KEGG:   hac:Hac_0583
- NMPDR:   fig|382638.8.peg.566
- eggNOG:   COG0355
- HOGENOM:   HBG663981
- OMA:   KKESDDR
- ProtClustDB:   PRK00571
- BioCyc:   HACI382638:HAC_0583-MONOMER
- HAMAP:   MF_00530
- InterPro:   IPR001469
- InterPro:   IPR020546
- Gene3D:   G3DSA:2.60.15.10
- PANTHER:   PTHR13822
- ProDom:   PD000944
- TIGRFAMs:   TIGR01216

Pfam domain/function: PF02823 ATP-synt_DE_N; SSF51344 ATPsynt_DE

EC number: 3.6.3.14

Molecular weight: Translated: 13283; Mature: 13152

Theoretical pI: Translated: 4.29; Mature: 4.29

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
0.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MALLKISVVVPEGEVYTGEVRSVVLPGVEGEFGVLYGHSNMITLLQAGVIEIETESQKEH
CCEEEEEEEECCCCEEECCEEEEEECCCCCCEEEEEECCCEEEEEECCEEEEEECCCCCE
IAISWGYAEVTGEHVDILADGAVFIKKESDDRDDAISRAKRLLEDASSDRLAVSSVLAKI
EEEEECEEEECCCEEEEEECCEEEEEECCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHH
ESL
HCC
>Mature Secondary Structure 
ALLKISVVVPEGEVYTGEVRSVVLPGVEGEFGVLYGHSNMITLLQAGVIEIETESQKEH
CEEEEEEEECCCCEEECCEEEEEECCCCCCEEEEEECCCEEEEEECCEEEEEECCCCCE
IAISWGYAEVTGEHVDILADGAVFIKKESDDRDDAISRAKRLLEDASSDRLAVSSVLAKI
EEEEECEEEECCCEEEEEECCEEEEEECCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHH
ESL
HCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: Borate; diphosphate; HCO3- [C]

Metal ions: Co2+; Fe2+; Mn2+; Zn2+ [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; H2O; H+

Specific reaction: ATP + H2O + H+(in) = ADP + phosphate + H+(out)

General reaction: Phosphorous acid anhydride hydrolysis [C]

Inhibitor: Ca2+; CN-; Efrapeptin; Ethidiumbromide; Guanidines analogs; Oligomycin; Quercetin; Trialkyl tin derivatives; Venturicidin [C]

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA