Definition | Helicobacter acinonychis str. Sheeba chromosome, complete genome. |
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Accession | NC_008229 |
Length | 1,553,927 |
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The map label for this gene is 109947158
Identifier: 109947158
GI number: 109947158
Start: 503002
End: 504285
Strand: Direct
Name: 109947158
Synonym: Hac_0571
Alternate gene names: NA
Gene position: 503002-504285 (Clockwise)
Preceding gene: 109947157
Following gene: 109947159
Centisome position: 32.37
GC content: 42.91
Gene sequence:
>1284_bases ATGCGAAAAATTGAATGCCCCCAATGCCAAACGCTCATCGATGTGAACGAGGCGCTATACAAACAGGTTGAATCCGAAAA TCAAAATCAGTTTTTAGCCCAGCAAAAAGCGTTGGAAAAAGAAATGGGTGAAAAAAGAGTGCAGTATGAAACCCGTCTCA AAAATTTAGTGCAAAAAGAAGAGGCCCTAAAGCAGCAAGAAAAAGAGCGAGAAGCTGGGTTTGAAGATGCAGTCAAGCGA GCGAGTGCGTTGGCTTTGCAAGATGAAAGGGCTAAAATCATGGAAGAAGCCAGAAAAAACGCTTTTTTAGAGGAGCGAAA GCGCGTGGAATGGATGCAAAAAGAATTAGAGGAGAAATCCAAACAAGTCCAAGAATTGCACCAAAAGGAAGCGGAAATTG AAAGACTGAAAAGAGAAAAGAATGAAATGGAGAGCGAATTAAAAGCTGAACATGAAAAAAAGCTGAATGACAAATTGGTT TTGGAAAGGGAAAAAATAGAAAAAGCCTTGCATGAAAAAAACGAGCTGCAACTCAGGCAGAAAGAAGAGCAATTAGAAAG GTTAAGAAATGAGTTGAAAAACGCTCACAGAAAGGCTGAATTAGGCTCGCAACAACTCCAGGGCGAGGTGCAAGAACTGG CGATTGAAGAGTTTTTGATCCAAAAATTCCCCCTAGATTGCATTGAAGAAATCAAAAAAGGGCAAAGAGGGGGCGATTGC ATTCAAGTGGTACACACCAGGGAGTTTCAAAATTGCGGGAAAATTTATTATGAGAGCAAACGCACTAAAGAATTTCAAAA GGCTTGGGTTGAAAAACTTAAAAGCGGCATGCGAGAGGTTGGGGCTGATGTGGGGGTCATTGTGAGTGAGGCATTGCCTA AAGAGATGGAGAGGATGGGGCTCTTTGAAGGGGTGTGGGTGTGCTCGTTTGAAGAGTTTAAGGGGTTAAGCGCGGCGTTA AGAGAGGGGGTTATTCAAGTGAGTTTGGCTAAAAGAAGTCAAGAAAATAAGGGCGATAAAATGGATTTGCTCTATCGTTA TTTGACAAGCCCTGAATTTTCTATGCAGGTGGGAGCGATTATAGAGGCGTTTGAGCAGCTCAAGGCGGATTTAGAAAGCG AAAAACGAGCGATGGCTAGGATTTGGAAAAGCAGGGAAAAACAAATTGAAAAAGTGTTTGACAGCACGATTGGCATGTAT GGCTCTATCAAGGGCATTGCAGGTAATGCCATAGGGCCAGTAAAGGCGTTAGAGCTTGGGTATGATGGGGGTTTGGGGGA TTAG
Upstream 100 bases:
>100_bases TTTTTCTCTCTTTTTGGCGTTTTGTTGTTGCACGCTAAAGATCCTTTTAACATTAATTTTATAAAATACCCGTTCTTAAA TACCACCATCAAGGAAAATC
Downstream 100 bases:
>100_bases TTTTGTATCCAATTTATGAGTGTGGAAAGTGGGGGAATTAAAGAAAAAAGCGAGAAAACATGGCGATCAACCTTAAAAAG ATAAAATCTCTTAACGCGTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 427; Mature: 427
Protein sequence:
>427_residues MRKIECPQCQTLIDVNEALYKQVESENQNQFLAQQKALEKEMGEKRVQYETRLKNLVQKEEALKQQEKEREAGFEDAVKR ASALALQDERAKIMEEARKNAFLEERKRVEWMQKELEEKSKQVQELHQKEAEIERLKREKNEMESELKAEHEKKLNDKLV LEREKIEKALHEKNELQLRQKEEQLERLRNELKNAHRKAELGSQQLQGEVQELAIEEFLIQKFPLDCIEEIKKGQRGGDC IQVVHTREFQNCGKIYYESKRTKEFQKAWVEKLKSGMREVGADVGVIVSEALPKEMERMGLFEGVWVCSFEEFKGLSAAL REGVIQVSLAKRSQENKGDKMDLLYRYLTSPEFSMQVGAIIEAFEQLKADLESEKRAMARIWKSREKQIEKVFDSTIGMY GSIKGIAGNAIGPVKALELGYDGGLGD
Sequences:
>Translated_427_residues MRKIECPQCQTLIDVNEALYKQVESENQNQFLAQQKALEKEMGEKRVQYETRLKNLVQKEEALKQQEKEREAGFEDAVKR ASALALQDERAKIMEEARKNAFLEERKRVEWMQKELEEKSKQVQELHQKEAEIERLKREKNEMESELKAEHEKKLNDKLV LEREKIEKALHEKNELQLRQKEEQLERLRNELKNAHRKAELGSQQLQGEVQELAIEEFLIQKFPLDCIEEIKKGQRGGDC IQVVHTREFQNCGKIYYESKRTKEFQKAWVEKLKSGMREVGADVGVIVSEALPKEMERMGLFEGVWVCSFEEFKGLSAAL REGVIQVSLAKRSQENKGDKMDLLYRYLTSPEFSMQVGAIIEAFEQLKADLESEKRAMARIWKSREKQIEKVFDSTIGMY GSIKGIAGNAIGPVKALELGYDGGLGD >Mature_427_residues MRKIECPQCQTLIDVNEALYKQVESENQNQFLAQQKALEKEMGEKRVQYETRLKNLVQKEEALKQQEKEREAGFEDAVKR ASALALQDERAKIMEEARKNAFLEERKRVEWMQKELEEKSKQVQELHQKEAEIERLKREKNEMESELKAEHEKKLNDKLV LEREKIEKALHEKNELQLRQKEEQLERLRNELKNAHRKAELGSQQLQGEVQELAIEEFLIQKFPLDCIEEIKKGQRGGDC IQVVHTREFQNCGKIYYESKRTKEFQKAWVEKLKSGMREVGADVGVIVSEALPKEMERMGLFEGVWVCSFEEFKGLSAAL REGVIQVSLAKRSQENKGDKMDLLYRYLTSPEFSMQVGAIIEAFEQLKADLESEKRAMARIWKSREKQIEKVFDSTIGMY GSIKGIAGNAIGPVKALELGYDGGLGD
Specific function: Unknown
COG id: COG4487
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 49559; Mature: 49559
Theoretical pI: Translated: 5.74; Mature: 5.74
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRKIECPQCQTLIDVNEALYKQVESENQNQFLAQQKALEKEMGEKRVQYETRLKNLVQKE CCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH EALKQQEKEREAGFEDAVKRASALALQDERAKIMEEARKNAFLEERKRVEWMQKELEEKS HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KQVQELHQKEAEIERLKREKNEMESELKAEHEKKLNDKLVLEREKIEKALHEKNELQLRQ HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH KEEQLERLRNELKNAHRKAELGSQQLQGEVQELAIEEFLIQKFPLDCIEEIKKGQRGGDC HHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCHH IQVVHTREFQNCGKIYYESKRTKEFQKAWVEKLKSGMREVGADVGVIVSEALPKEMERMG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCC LFEGVWVCSFEEFKGLSAALREGVIQVSLAKRSQENKGDKMDLLYRYLTSPEFSMQVGAI HHHHHHHCCHHHHHHHHHHHHHCHHHHHHHHHHCCCCCCHHHHHHHHHCCCCHHHHHHHH IEAFEQLKADLESEKRAMARIWKSREKQIEKVFDSTIGMYGSIKGIAGNAIGPVKALELG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHCC YDGGLGD CCCCCCC >Mature Secondary Structure MRKIECPQCQTLIDVNEALYKQVESENQNQFLAQQKALEKEMGEKRVQYETRLKNLVQKE CCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH EALKQQEKEREAGFEDAVKRASALALQDERAKIMEEARKNAFLEERKRVEWMQKELEEKS HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KQVQELHQKEAEIERLKREKNEMESELKAEHEKKLNDKLVLEREKIEKALHEKNELQLRQ HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH KEEQLERLRNELKNAHRKAELGSQQLQGEVQELAIEEFLIQKFPLDCIEEIKKGQRGGDC HHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCHH IQVVHTREFQNCGKIYYESKRTKEFQKAWVEKLKSGMREVGADVGVIVSEALPKEMERMG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCC LFEGVWVCSFEEFKGLSAALREGVIQVSLAKRSQENKGDKMDLLYRYLTSPEFSMQVGAI HHHHHHHCCHHHHHHHHHHHHHCHHHHHHHHHHCCCCCCHHHHHHHHHCCCCHHHHHHHH IEAFEQLKADLESEKRAMARIWKSREKQIEKVFDSTIGMYGSIKGIAGNAIGPVKALELG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHCC YDGGLGD CCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA