Definition | Helicobacter acinonychis str. Sheeba chromosome, complete genome. |
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Accession | NC_008229 |
Length | 1,553,927 |
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The map label for this gene is yleA [C]
Identifier: 109947136
GI number: 109947136
Start: 469176
End: 470432
Strand: Direct
Name: yleA [C]
Synonym: Hac_0545
Alternate gene names: 109947136
Gene position: 469176-470432 (Clockwise)
Preceding gene: 109947135
Following gene: 109947137
Centisome position: 30.19
GC content: 37.31
Gene sequence:
>1257_bases ATGAAAAAAGTCTATTTTAAAACTTTTGGGTGCAGAACGAATCTTTTTGACACGCAAGTGATGGGCGAGAATTTAAAGGA TTTTAGCGCGACTTTAGAAGAAAATGAAGCGGATATTATTATTATCAATTCTTGCACCGTAACTAATGGGGCTGATAGCG CGGTAAGGAGCTACGCTAAAAAAATGGTGCGTTTGAATAAGGAAGTGTTATTCACTGGCTGTGGGGTGAAAACTCAAGGC AAAGAGCTTTTTGAAAAAGGGTTTTTAAAGGGCGTTTTTGGGCATGACAATAAAGAAAAGATCAATACGCTTTTACAAGA AAAAAAGCGTTTTTTCATAGATGATAATTTAGAAAACAAGCACTTAGACACCACGATGGTGAGCGAGTTTGTGGGCAAGA CTAGGGCGTTTATTAAGATTCAAGAGGGTTGTGATTTTGATTGCAATTATTGCATTATCCCAAGCGTGAGAGGGAGAGCT AGGAGTTTTGAAGAAAGAAAAATTTTAGAGCAGGTGGGCCTTTTATGCGCTAAAGGGGTTCAAGAAGTGGTCTTAACCGG CACTAATGTGGGGAGCTATGGGAAAGATAGAGAGAGTAATATCGCAAGATTGATTAAAAAATTAAGCCAAATTGTTGGAT TAAAACGCATCAGAATTGGGAGCTTAGAGCCTAATCAAATCAACGATGAGTTTTTAGAGCTTTTAGAAGAGGATTTTTTA GAAAAACATTTGCATATCGCTTTACAGCATAGTCATGACTTCATGTTAGAGAGGATGAACAGGAGGAATCGCGTGAAAAG CGATAGGGAATTATTAGAGGTAATTGCTTCTAAAAATTTTGCTATCGGCACGGATTTTATTGTAGGGCATCCGGGCGAGA GTGAAAGCGTTTTTGAAAAGGCGTTTGAAAATTTAGAGGGCTTGCCTTTAACGCATATCCACCCTTTTATTTATAGCAAA CGAAAGGACACCCCTTCTAGTTTGATGCATGATAGCGTGAGTTTAGAAGTTTCTAAAAAGCGTTTGAATGCGATTAAAGA TTTGATTTTTCATAAAAATAAGGTGTTCAGACAATTGCAACTCAAGCGTAACACGCCCCTAAAAGCTTTAGTGGAAGCGC AAAAAGATGGCGAATTTAAAGCCTTGGATCAATTTTTTAACCCCATTAAAATCAAAAGCGATAAGCCTTTAAGGGCTAGT TTTTTAGAAATCAAAGAGTATGAAATTAAGGAGAGAGAAAATTATGCCATTTTCTAA
Upstream 100 bases:
>100_bases CTTTTTTGAAAGAAGAAAATATCCATATCGCTTATACCACCAGCAAATTGCTTAAAGTGGATACTGAGGGCGATGGCTTT GGGAATAAAAGGTAACAAGA
Downstream 100 bases:
>100_bases AAGTTTAGAAAATCTCATCAACCCTTTTAAACGCATCAAAAACCGCTCGCTTGTGTTGGCGTTAGGGTTTTTGATCCTTA CTTTTTGCTTGCTTCTTTTT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 418; Mature: 418
Protein sequence:
>418_residues MKKVYFKTFGCRTNLFDTQVMGENLKDFSATLEENEADIIIINSCTVTNGADSAVRSYAKKMVRLNKEVLFTGCGVKTQG KELFEKGFLKGVFGHDNKEKINTLLQEKKRFFIDDNLENKHLDTTMVSEFVGKTRAFIKIQEGCDFDCNYCIIPSVRGRA RSFEERKILEQVGLLCAKGVQEVVLTGTNVGSYGKDRESNIARLIKKLSQIVGLKRIRIGSLEPNQINDEFLELLEEDFL EKHLHIALQHSHDFMLERMNRRNRVKSDRELLEVIASKNFAIGTDFIVGHPGESESVFEKAFENLEGLPLTHIHPFIYSK RKDTPSSLMHDSVSLEVSKKRLNAIKDLIFHKNKVFRQLQLKRNTPLKALVEAQKDGEFKALDQFFNPIKIKSDKPLRAS FLEIKEYEIKERENYAIF
Sequences:
>Translated_418_residues MKKVYFKTFGCRTNLFDTQVMGENLKDFSATLEENEADIIIINSCTVTNGADSAVRSYAKKMVRLNKEVLFTGCGVKTQG KELFEKGFLKGVFGHDNKEKINTLLQEKKRFFIDDNLENKHLDTTMVSEFVGKTRAFIKIQEGCDFDCNYCIIPSVRGRA RSFEERKILEQVGLLCAKGVQEVVLTGTNVGSYGKDRESNIARLIKKLSQIVGLKRIRIGSLEPNQINDEFLELLEEDFL EKHLHIALQHSHDFMLERMNRRNRVKSDRELLEVIASKNFAIGTDFIVGHPGESESVFEKAFENLEGLPLTHIHPFIYSK RKDTPSSLMHDSVSLEVSKKRLNAIKDLIFHKNKVFRQLQLKRNTPLKALVEAQKDGEFKALDQFFNPIKIKSDKPLRAS FLEIKEYEIKERENYAIF >Mature_418_residues MKKVYFKTFGCRTNLFDTQVMGENLKDFSATLEENEADIIIINSCTVTNGADSAVRSYAKKMVRLNKEVLFTGCGVKTQG KELFEKGFLKGVFGHDNKEKINTLLQEKKRFFIDDNLENKHLDTTMVSEFVGKTRAFIKIQEGCDFDCNYCIIPSVRGRA RSFEERKILEQVGLLCAKGVQEVVLTGTNVGSYGKDRESNIARLIKKLSQIVGLKRIRIGSLEPNQINDEFLELLEEDFL EKHLHIALQHSHDFMLERMNRRNRVKSDRELLEVIASKNFAIGTDFIVGHPGESESVFEKAFENLEGLPLTHIHPFIYSK RKDTPSSLMHDSVSLEVSKKRLNAIKDLIFHKNKVFRQLQLKRNTPLKALVEAQKDGEFKALDQFFNPIKIKSDKPLRAS FLEIKEYEIKERENYAIF
Specific function: Unknown
COG id: COG0621
COG function: function code J; 2-methylthioadenine synthetase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 MTTase N-terminal domain [H]
Homologues:
Organism=Homo sapiens, GI93277076, Length=429, Percent_Identity=25.4079254079254, Blast_Score=129, Evalue=6e-30, Organism=Homo sapiens, GI28872782, Length=388, Percent_Identity=26.8041237113402, Blast_Score=120, Evalue=2e-27, Organism=Homo sapiens, GI28872784, Length=388, Percent_Identity=26.8041237113402, Blast_Score=120, Evalue=2e-27, Organism=Escherichia coli, GI1786882, Length=392, Percent_Identity=27.8061224489796, Blast_Score=142, Evalue=3e-35, Organism=Escherichia coli, GI1787057, Length=366, Percent_Identity=25.9562841530055, Blast_Score=110, Evalue=2e-25, Organism=Caenorhabditis elegans, GI17553146, Length=411, Percent_Identity=25.0608272506083, Blast_Score=99, Evalue=4e-21, Organism=Caenorhabditis elegans, GI71996771, Length=218, Percent_Identity=25.6880733944954, Blast_Score=73, Evalue=3e-13, Organism=Drosophila melanogaster, GI21356207, Length=388, Percent_Identity=28.3505154639175, Blast_Score=135, Evalue=5e-32, Organism=Drosophila melanogaster, GI19922432, Length=367, Percent_Identity=26.158038147139, Blast_Score=113, Evalue=2e-25,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006638 - InterPro: IPR005839 - InterPro: IPR020612 - InterPro: IPR013848 - InterPro: IPR006467 - InterPro: IPR007197 [H]
Pfam domain/function: PF04055 Radical_SAM; PF00919 UPF0004 [H]
EC number: NA
Molecular weight: Translated: 48067; Mature: 48067
Theoretical pI: Translated: 8.97; Mature: 8.97
Prosite motif: PS01305 MOAA_NIFB_PQQE ; PS01278 UPF0004
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKVYFKTFGCRTNLFDTQVMGENLKDFSATLEENEADIIIINSCTVTNGADSAVRSYAK CCEEEEEECCCCCCCCHHHHHHCCHHHHHHHHCCCCCCEEEEECEECCCCCHHHHHHHHH KMVRLNKEVLFTGCGVKTQGKELFEKGFLKGVFGHDNKEKINTLLQEKKRFFIDDNLENK HHHHHCHHHEEECCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHEECCCCCCCC HLDTTMVSEFVGKTRAFIKIQEGCDFDCNYCIIPSVRGRARSFEERKILEQVGLLCAKGV CCHHHHHHHHHCCCEEEEEEECCCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHCH QEVVLTGTNVGSYGKDRESNIARLIKKLSQIVGLKRIRIGSLEPNQINDEFLELLEEDFL HHHHEECCCCCCCCCCHHHHHHHHHHHHHHHHCHHHEEECCCCCCCCCHHHHHHHHHHHH EKHLHIALQHSHDFMLERMNRRNRVKSDRELLEVIASKNFAIGTDFIVGHPGESESVFEK HHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHCCCCEECCCEEEECCCCCHHHHHH AFENLEGLPLTHIHPFIYSKRKDTPSSLMHDSVSLEVSKKRLNAIKDLIFHKNKVFRQLQ HHHCCCCCCCHHCCHHHHCCCCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH LKRNTPLKALVEAQKDGEFKALDQFFNPIKIKSDKPLRASFLEIKEYEIKERENYAIF HHCCCCHHHHHHHHCCCCHHHHHHHCCCEEECCCCCHHHHHHHHHHHHHHCCCCCCCC >Mature Secondary Structure MKKVYFKTFGCRTNLFDTQVMGENLKDFSATLEENEADIIIINSCTVTNGADSAVRSYAK CCEEEEEECCCCCCCCHHHHHHCCHHHHHHHHCCCCCCEEEEECEECCCCCHHHHHHHHH KMVRLNKEVLFTGCGVKTQGKELFEKGFLKGVFGHDNKEKINTLLQEKKRFFIDDNLENK HHHHHCHHHEEECCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHEECCCCCCCC HLDTTMVSEFVGKTRAFIKIQEGCDFDCNYCIIPSVRGRARSFEERKILEQVGLLCAKGV CCHHHHHHHHHCCCEEEEEEECCCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHCH QEVVLTGTNVGSYGKDRESNIARLIKKLSQIVGLKRIRIGSLEPNQINDEFLELLEEDFL HHHHEECCCCCCCCCCHHHHHHHHHHHHHHHHCHHHEEECCCCCCCCCHHHHHHHHHHHH EKHLHIALQHSHDFMLERMNRRNRVKSDRELLEVIASKNFAIGTDFIVGHPGESESVFEK HHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHCCCCEECCCEEEECCCCCHHHHHH AFENLEGLPLTHIHPFIYSKRKDTPSSLMHDSVSLEVSKKRLNAIKDLIFHKNKVFRQLQ HHHCCCCCCCHHCCHHHHCCCCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH LKRNTPLKALVEAQKDGEFKALDQFFNPIKIKSDKPLRASFLEIKEYEIKERENYAIF HHCCCCHHHHHHHHCCCCHHHHHHHCCCEEECCCCCHHHHHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9923682 [H]