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The map label for this gene is yfbE [C]

Identifier: 109947112

GI number: 109947112

Start: 444860

End: 445984

Strand: Direct

Name: yfbE [C]

Synonym: Hac_0518

Alternate gene names: 109947112

Gene position: 444860-445984 (Clockwise)

Preceding gene: 109947111

Following gene: 109947113

Centisome position: 28.63

GC content: 37.6

Gene sequence:

>1125_bases
TTGAAACCATTTGCTTATAGCGAGCCTTGTTTGGATGAAGAAGATAAAAAGGCTGTATTAGAAGTTTTAAATTCTAAACA
GCTCACGCAAGGCAAGCATTCTCTTTTATTTGAAGAAGCTTTGTGTGAGTTTTTAGGCGTTAAGCATGCGTTAGTGTTTA
ATAGCGCGACTTCAGCCCTTTTAACGCTTTATAGGAATTTTAGCGATTTTAACGCTGATTGTAATGAAATAATCACCACC
CCTATAAGCTTTGTAGCGACGGCTAACATGCTTTTAGAGAGTGGTTACAAACCTATATTTGCTGAAGTCAAAAACGATGG
CAATATAGATGAATTAGCTTTAGAAAAGCTTATTAGCAAAAAAACTAAAGCCATTGTGAGCGTGGATTATGCCGGTAAAA
GCGTGGAAGTAGAAAGTATTCAAAGGCTTTGCAAAAAGCATTCTTTGAGTTTCCTTTCTGACAGCTCGCATGCTTTAGGG
AGTGAGTATCGCAACAAAAAAGTAGGAGGCTTTGCGTTAGCGAGCGTGTTTAGTTTCCATGCCATCAAGCCTATCACTAC
GGCTGAAGGGGGTGCGGTCGTGACTAACGATAGCGAATTGTATGAAAGAATGAAATTATTTCGCTCTCATGGCATGCTCA
AAAAAGATTTTTTTGAAGGCGAAGTAGAAAGCGTGGGGTATAACTTCCGTTTGAATGAAATCCAGAGCGCTTTGGGTTTG
AGCCAGCTTAAAAAAGTCTCTCTTTTGATGCAAAAAAGAGAAGAAATCGCTCTAGTTTATGATAGGATTTTTAAAGATAA
CCCTTATTTCACCCCCTTGCACCTTTCTTTAAAACATAAAAGCTCTAACCACCTTTATCCCATTTTAATCCACCAAAAAT
TTTTCACAAATAAAAGATTTATTTTAGAAAATTTGCACAAGCTTGGCATTTTAGCCCAAGTGCATTACAAACCTATTTAT
CAATACCAATTATACCAACAGCTTTTTAACACCGCTCCCCTAAAAAGTGCAGAGAATTTTTATGGCGCTGAAATCTCCCT
GCCTTGTCATGCGAATTTGGATTTAGAAAGCGTGAAAAGCATCGCTCATGGCGTTTTAAAGACTTTTGAGGGTTTTGTAT
TATAA

Upstream 100 bases:

>100_bases
AATACGACACTTTAGATAAAGCAAGATTGAACGCTCAAAAATTCCAAGATGTCCATGACACAAGCAAGATCACACCATCT
CGCTTACAAGACTTGCTCGC

Downstream 100 bases:

>100_bases
GTTTGATTGATTTCTATAAGGTGTTTGAAGTGAGTTTAGCCGATACGATTTTAGAGCGTTTTAAAGATTTTATGAGAGAA
CAGCCTGAGCCTTACAAATT

Product: sugar nucleotide biosynthesis

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 374; Mature: 374

Protein sequence:

>374_residues
MKPFAYSEPCLDEEDKKAVLEVLNSKQLTQGKHSLLFEEALCEFLGVKHALVFNSATSALLTLYRNFSDFNADCNEIITT
PISFVATANMLLESGYKPIFAEVKNDGNIDELALEKLISKKTKAIVSVDYAGKSVEVESIQRLCKKHSLSFLSDSSHALG
SEYRNKKVGGFALASVFSFHAIKPITTAEGGAVVTNDSELYERMKLFRSHGMLKKDFFEGEVESVGYNFRLNEIQSALGL
SQLKKVSLLMQKREEIALVYDRIFKDNPYFTPLHLSLKHKSSNHLYPILIHQKFFTNKRFILENLHKLGILAQVHYKPIY
QYQLYQQLFNTAPLKSAENFYGAEISLPCHANLDLESVKSIAHGVLKTFEGFVL

Sequences:

>Translated_374_residues
MKPFAYSEPCLDEEDKKAVLEVLNSKQLTQGKHSLLFEEALCEFLGVKHALVFNSATSALLTLYRNFSDFNADCNEIITT
PISFVATANMLLESGYKPIFAEVKNDGNIDELALEKLISKKTKAIVSVDYAGKSVEVESIQRLCKKHSLSFLSDSSHALG
SEYRNKKVGGFALASVFSFHAIKPITTAEGGAVVTNDSELYERMKLFRSHGMLKKDFFEGEVESVGYNFRLNEIQSALGL
SQLKKVSLLMQKREEIALVYDRIFKDNPYFTPLHLSLKHKSSNHLYPILIHQKFFTNKRFILENLHKLGILAQVHYKPIY
QYQLYQQLFNTAPLKSAENFYGAEISLPCHANLDLESVKSIAHGVLKTFEGFVL
>Mature_374_residues
MKPFAYSEPCLDEEDKKAVLEVLNSKQLTQGKHSLLFEEALCEFLGVKHALVFNSATSALLTLYRNFSDFNADCNEIITT
PISFVATANMLLESGYKPIFAEVKNDGNIDELALEKLISKKTKAIVSVDYAGKSVEVESIQRLCKKHSLSFLSDSSHALG
SEYRNKKVGGFALASVFSFHAIKPITTAEGGAVVTNDSELYERMKLFRSHGMLKKDFFEGEVESVGYNFRLNEIQSALGL
SQLKKVSLLMQKREEIALVYDRIFKDNPYFTPLHLSLKHKSSNHLYPILIHQKFFTNKRFILENLHKLGILAQVHYKPIY
QYQLYQQLFNTAPLKSAENFYGAEISLPCHANLDLESVKSIAHGVLKTFEGFVL

Specific function: Unknown

COG id: COG0399

COG function: function code M; Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the degT/dnrJ/eryC1 family [H]

Homologues:

Organism=Escherichia coli, GI145693159, Length=347, Percent_Identity=31.1239193083574, Blast_Score=177, Evalue=1e-45,
Organism=Escherichia coli, GI2367285, Length=186, Percent_Identity=34.9462365591398, Blast_Score=120, Evalue=2e-28,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000653
- InterPro:   IPR015424
- InterPro:   IPR015421
- InterPro:   IPR015422 [H]

Pfam domain/function: PF01041 DegT_DnrJ_EryC1 [H]

EC number: NA

Molecular weight: Translated: 42239; Mature: 42239

Theoretical pI: Translated: 7.96; Mature: 7.96

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKPFAYSEPCLDEEDKKAVLEVLNSKQLTQGKHSLLFEEALCEFLGVKHALVFNSATSAL
CCCCCCCCCCCCCHHHHHHHHHHCCHHHHCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH
LTLYRNFSDFNADCNEIITTPISFVATANMLLESGYKPIFAEVKNDGNIDELALEKLISK
HHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEHEECCCCCHHHHHHHHHHHH
KTKAIVSVDYAGKSVEVESIQRLCKKHSLSFLSDSSHALGSEYRNKKVGGFALASVFSFH
HHHHEEEEECCCCCEEHHHHHHHHHHHCHHHHCCCCHHHHHHHCCCCCCHHHHHHHHHHH
AIKPITTAEGGAVVTNDSELYERMKLFRSHGMLKKDFFEGEVESVGYNFRLNEIQSALGL
CCCCEEECCCCEEEECCHHHHHHHHHHHHCCCHHHHHHCCHHHHCCCCEEHHHHHHHHHH
SQLKKVSLLMQKREEIALVYDRIFKDNPYFTPLHLSLKHKSSNHLYPILIHQKFFTNKRF
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEEECCCCCEEEEEEEHHHHCCHHH
ILENLHKLGILAQVHYKPIYQYQLYQQLFNTAPLKSAENFYGAEISLPCHANLDLESVKS
HHHHHHHHHHHEEECCCHHHHHHHHHHHHCCCCCCCCCCCCCCEEECCCCCCCCHHHHHH
IAHGVLKTFEGFVL
HHHHHHHHHHCCCC
>Mature Secondary Structure
MKPFAYSEPCLDEEDKKAVLEVLNSKQLTQGKHSLLFEEALCEFLGVKHALVFNSATSAL
CCCCCCCCCCCCCHHHHHHHHHHCCHHHHCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH
LTLYRNFSDFNADCNEIITTPISFVATANMLLESGYKPIFAEVKNDGNIDELALEKLISK
HHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEHEECCCCCHHHHHHHHHHHH
KTKAIVSVDYAGKSVEVESIQRLCKKHSLSFLSDSSHALGSEYRNKKVGGFALASVFSFH
HHHHEEEEECCCCCEEHHHHHHHHHHHCHHHHCCCCHHHHHHHCCCCCCHHHHHHHHHHH
AIKPITTAEGGAVVTNDSELYERMKLFRSHGMLKKDFFEGEVESVGYNFRLNEIQSALGL
CCCCEEECCCCEEEECCHHHHHHHHHHHHCCCHHHHHHCCHHHHCCCCEEHHHHHHHHHH
SQLKKVSLLMQKREEIALVYDRIFKDNPYFTPLHLSLKHKSSNHLYPILIHQKFFTNKRF
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEEECCCCCEEEEEEEHHHHCCHHH
ILENLHKLGILAQVHYKPIYQYQLYQQLFNTAPLKSAENFYGAEISLPCHANLDLESVKS
HHHHHHHHHHHEEECCCHHHHHHHHHHHHCCCCCCCCCCCCCCEEECCCCCCCCHHHHHH
IAHGVLKTFEGFVL
HHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]