Definition | Helicobacter acinonychis str. Sheeba chromosome, complete genome. |
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Accession | NC_008229 |
Length | 1,553,927 |
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The map label for this gene is 109947111
Identifier: 109947111
GI number: 109947111
Start: 444255
End: 444863
Strand: Direct
Name: 109947111
Synonym: Hac_0517
Alternate gene names: NA
Gene position: 444255-444863 (Clockwise)
Preceding gene: 109947097
Following gene: 109947112
Centisome position: 28.59
GC content: 35.3
Gene sequence:
>609_bases ATGCCTAAGATTTCAAGTAATTATAATCCGTCTTTAATGATGAGAGATTATCATGCCCAAAGGGTTAGTCCGCAAGCAAG AAAAGAAGAGAATAAGGAAATTCAAAATCTTTCAGAGAGTGATGAAAGAATCAAATTAGCCAGACAAGCTAAGCAAAATA ACCTAGCCATAGGGACTTTAGAAAGCCGTCTTAAAAGCTTAAAAAGCATGGATAAAGACGCTAAAGAGTTAATGGGGATT TCTAAAGCTTATGCCCATAATAATAATGAAAAGAATCAAAACGATTTTGAACATTTTAAAATCCGTTTGGACAAGGCAAT TGATGCTTTCAATCAAAATTTAGGTAATGATACGACCAGTTTGAAATTCCCTAATCGTATTGATATTGATGACCCTAAAG CTTTGGAACAATTTTCAAAATCATTAAAAAGTGAGAAAGAAAACATTCAAAATTCTTTGCACCAGTGGAAAAAGCAGCTC GCCGAAACGAATCGCTTGAGCAAGGAATACGACACTTTAGATAAAGCAAGATTGAACGCTCAAAAATTCCAAGATGTCCA TGACACAAGCAAGATCACACCATCTCGCTTACAAGACTTGCTCGCTTGA
Upstream 100 bases:
>100_bases TAGATTAATATTTTGAGGTAGGATTAAGTAAATTATAATGTTTTTAGGAATAGAGTTTGCTTGTCTTATTTTTAAGTAAA AAAATGAAGTGGAGGATAGG
Downstream 100 bases:
>100_bases AACCATTTGCTTATAGCGAGCCTTGTTTGGATGAAGAAGATAAAAAGGCTGTATTAGAAGTTTTAAATTCTAAACAGCTC ACGCAAGGCAAGCATTCTCT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 202; Mature: 201
Protein sequence:
>202_residues MPKISSNYNPSLMMRDYHAQRVSPQARKEENKEIQNLSESDERIKLARQAKQNNLAIGTLESRLKSLKSMDKDAKELMGI SKAYAHNNNEKNQNDFEHFKIRLDKAIDAFNQNLGNDTTSLKFPNRIDIDDPKALEQFSKSLKSEKENIQNSLHQWKKQL AETNRLSKEYDTLDKARLNAQKFQDVHDTSKITPSRLQDLLA
Sequences:
>Translated_202_residues MPKISSNYNPSLMMRDYHAQRVSPQARKEENKEIQNLSESDERIKLARQAKQNNLAIGTLESRLKSLKSMDKDAKELMGI SKAYAHNNNEKNQNDFEHFKIRLDKAIDAFNQNLGNDTTSLKFPNRIDIDDPKALEQFSKSLKSEKENIQNSLHQWKKQL AETNRLSKEYDTLDKARLNAQKFQDVHDTSKITPSRLQDLLA >Mature_201_residues PKISSNYNPSLMMRDYHAQRVSPQARKEENKEIQNLSESDERIKLARQAKQNNLAIGTLESRLKSLKSMDKDAKELMGIS KAYAHNNNEKNQNDFEHFKIRLDKAIDAFNQNLGNDTTSLKFPNRIDIDDPKALEQFSKSLKSEKENIQNSLHQWKKQLA ETNRLSKEYDTLDKARLNAQKFQDVHDTSKITPSRLQDLLA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23402; Mature: 23270
Theoretical pI: Translated: 9.87; Mature: 9.87
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPKISSNYNPSLMMRDYHAQRVSPQARKEENKEIQNLSESDERIKLARQAKQNNLAIGTL CCCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHH ESRLKSLKSMDKDAKELMGISKAYAHNNNEKNQNDFEHFKIRLDKAIDAFNQNLGNDTTS HHHHHHHHHHCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCC LKFPNRIDIDDPKALEQFSKSLKSEKENIQNSLHQWKKQLAETNRLSKEYDTLDKARLNA CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QKFQDVHDTSKITPSRLQDLLA HHHHHHHHHHCCCHHHHHHHHC >Mature Secondary Structure PKISSNYNPSLMMRDYHAQRVSPQARKEENKEIQNLSESDERIKLARQAKQNNLAIGTL CCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHH ESRLKSLKSMDKDAKELMGISKAYAHNNNEKNQNDFEHFKIRLDKAIDAFNQNLGNDTTS HHHHHHHHHHCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCC LKFPNRIDIDDPKALEQFSKSLKSEKENIQNSLHQWKKQLAETNRLSKEYDTLDKARLNA CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QKFQDVHDTSKITPSRLQDLLA HHHHHHHHHHCCCHHHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA