| Definition | Yersinia pestis Nepal516, complete genome. |
|---|---|
| Accession | NC_008149 |
| Length | 4,534,590 |
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The map label for this gene is ftnA [H]
Identifier: 108812501
GI number: 108812501
Start: 2621524
End: 2622033
Strand: Reverse
Name: ftnA [H]
Synonym: YPN_2340
Alternate gene names: 108812501
Gene position: 2622033-2621524 (Counterclockwise)
Preceding gene: 108812503
Following gene: 108812500
Centisome position: 57.82
GC content: 39.8
Gene sequence:
>510_bases ATGTTAAAAAAAGAAATGGCACAAAAACTCAATGAGCAACTGAATCTGGAGTTTTACTCTGCGAATCTTTATCTGCAAAT GAGTGCTTGGTGCAGCGATAAAGGTTTTGAAGGTGCGGCTGCCTTTTTAAAAAAGCATTCTCAAGAAGAAATGCAACATA TGGAACGTTTGTTTGAATATCTCAGTGGAACTGGCTCTATGCCTGTACTGGGTACGATTACGGCTCCACCTGTAGATTTT GCATCATTAGCTGATGTATTCAAGCTTACGTATGAACATGAGCAATTAATTACCACTCAAATCAATGAGCTTGCCCATGT TGCGATGACCACTCATGATTACTCCACATTCAATTTCCTACAGTGGTATGTTGCTGAACAACATGAGGAAGAGAAACTGT TCAAATCTATTTTGGATAAACTGGCTCTGGTGGGTAATAGCGGTAATTCGTTGTTCTTCGTTGATAAAGATTTGAAAACA ATGGCGGCCCAAGGCTACACGTCAGCTTAA
Upstream 100 bases:
>100_bases AAATAATAATGTGAATAGAGTGTTTTTATTTTGTTTTTATCTTGGCATAATACACCAAGTTAATTATTTCTTGCCCATAT CAAAAAGTAAGGGAATTATT
Downstream 100 bases:
>100_bases CCGGTATTGAGAAAATATTCGCCGCGGTACTATTATTGGGTACTGCGGCTTTGTTGTTGCCTATCCCTCCCCGCGATCCT CGCCTTTTCTTGTTTTTCTT
Product: ferritin
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 169; Mature: 169
Protein sequence:
>169_residues MLKKEMAQKLNEQLNLEFYSANLYLQMSAWCSDKGFEGAAAFLKKHSQEEMQHMERLFEYLSGTGSMPVLGTITAPPVDF ASLADVFKLTYEHEQLITTQINELAHVAMTTHDYSTFNFLQWYVAEQHEEEKLFKSILDKLALVGNSGNSLFFVDKDLKT MAAQGYTSA
Sequences:
>Translated_169_residues MLKKEMAQKLNEQLNLEFYSANLYLQMSAWCSDKGFEGAAAFLKKHSQEEMQHMERLFEYLSGTGSMPVLGTITAPPVDF ASLADVFKLTYEHEQLITTQINELAHVAMTTHDYSTFNFLQWYVAEQHEEEKLFKSILDKLALVGNSGNSLFFVDKDLKT MAAQGYTSA >Mature_169_residues MLKKEMAQKLNEQLNLEFYSANLYLQMSAWCSDKGFEGAAAFLKKHSQEEMQHMERLFEYLSGTGSMPVLGTITAPPVDF ASLADVFKLTYEHEQLITTQINELAHVAMTTHDYSTFNFLQWYVAEQHEEEKLFKSILDKLALVGNSGNSLFFVDKDLKT MAAQGYTSA
Specific function: Iron-storage protein [H]
COG id: COG1528
COG function: function code P; Ferritin-like protein
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ferritin-like diiron domain [H]
Homologues:
Organism=Escherichia coli, GI1788216, Length=165, Percent_Identity=64.2424242424242, Blast_Score=233, Evalue=5e-63, Organism=Escherichia coli, GI1788212, Length=136, Percent_Identity=36.0294117647059, Blast_Score=100, Evalue=9e-23,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR009040 - InterPro: IPR012347 - InterPro: IPR009078 - InterPro: IPR008331 - InterPro: IPR001519 [H]
Pfam domain/function: PF00210 Ferritin [H]
EC number: =1.16.3.1 [H]
Molecular weight: Translated: 19209; Mature: 19209
Theoretical pI: Translated: 4.83; Mature: 4.83
Prosite motif: PS50905 FERRITIN_LIKE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 4.7 %Met (Translated Protein) 5.3 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 4.7 %Met (Mature Protein) 5.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLKKEMAQKLNEQLNLEFYSANLYLQMSAWCSDKGFEGAAAFLKKHSQEEMQHMERLFEY CCHHHHHHHHHHHHCEEEEECEEEEEEECCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHH LSGTGSMPVLGTITAPPVDFASLADVFKLTYEHEQLITTQINELAHVAMTTHDYSTFNFL HCCCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHH QWYVAEQHEEEKLFKSILDKLALVGNSGNSLFFVDKDLKTMAAQGYTSA HHHHHHCCHHHHHHHHHHHHHHHHCCCCCEEEEEECHHHHHHHCCCCCC >Mature Secondary Structure MLKKEMAQKLNEQLNLEFYSANLYLQMSAWCSDKGFEGAAAFLKKHSQEEMQHMERLFEY CCHHHHHHHHHHHHCEEEEECEEEEEEECCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHH LSGTGSMPVLGTITAPPVDFASLADVFKLTYEHEQLITTQINELAHVAMTTHDYSTFNFL HCCCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHH QWYVAEQHEEEKLFKSILDKLALVGNSGNSLFFVDKDLKTMAAQGYTSA HHHHHHCCHHHHHHHHHHHHHHHHCCCCCEEEEEECHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]