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The map label for this gene is yobA [H]

Identifier: 108812500

GI number: 108812500

Start: 2620732

End: 2621118

Strand: Reverse

Name: yobA [H]

Synonym: YPN_2339

Alternate gene names: 108812500

Gene position: 2621118-2620732 (Counterclockwise)

Preceding gene: 108812501

Following gene: 108812499

Centisome position: 57.8

GC content: 46.77

Gene sequence:

>387_bases
ATGTTTATTCGTAAAGTACGCTCATCTTGCCGCATGTTGTCGGCTCTTATTGTGTTATTTGTTGGCCTTTCTAGCCAGCA
AGCGCTTGCTCATGCGCATTTAAAAGCGGAGACCCCGGCTGCAGATACCACTATAAATGCTGCACCTGAAGCCTTAACGT
TGGGCTTCTCTGAGGGCATTGAGCTGAACTTCAGTGGTGTTAAAGTCACGGGGCCGGATAATAATGTGGTCAAAACCGGT
GATCTTAAATTGGATCCCGCGAATAACACCCAACTGATTTTGCCGATTGGCCATGCTTTAGCTGCTGGAAAATATCATGT
CTCATGGCACGTTGTCTCGGTTGATGGCCATAAGACGAAAGGCACTTACAGCTTCACTGTGAAATAG

Upstream 100 bases:

>100_bases
GGTAGTGCATTTGACTGGAAGTGATAGGGGTTCATGCTGCCAATATAGGATATGGTTGGTAGTAGACGATTCTTCCCCCC
ATCGATTAAGGGACACTTAT

Downstream 100 bases:

>100_bases
ATATGTCTTTGGCGACTCTATTCATTCTGTGTCGCTTTCTGCACTTTATGGCAGTGATGCTGATGTTTGGCATCACTGTA
TTCACCGCCTTTTTGGCACC

Product: copper resistance protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 128; Mature: 128

Protein sequence:

>128_residues
MFIRKVRSSCRMLSALIVLFVGLSSQQALAHAHLKAETPAADTTINAAPEALTLGFSEGIELNFSGVKVTGPDNNVVKTG
DLKLDPANNTQLILPIGHALAAGKYHVSWHVVSVDGHKTKGTYSFTVK

Sequences:

>Translated_128_residues
MFIRKVRSSCRMLSALIVLFVGLSSQQALAHAHLKAETPAADTTINAAPEALTLGFSEGIELNFSGVKVTGPDNNVVKTG
DLKLDPANNTQLILPIGHALAAGKYHVSWHVVSVDGHKTKGTYSFTVK
>Mature_128_residues
MFIRKVRSSCRMLSALIVLFVGLSSQQALAHAHLKAETPAADTTINAAPEALTLGFSEGIELNFSGVKVTGPDNNVVKTG
DLKLDPANNTQLILPIGHALAAGKYHVSWHVVSVDGHKTKGTYSFTVK

Specific function: Unknown

COG id: COG2372

COG function: function code R; Uncharacterized protein, homolog of Cu resistance protein CopC

Gene ontology:

Cell location: Periplasm [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CopC family [H]

Homologues:

Organism=Escherichia coli, GI1788146, Length=122, Percent_Identity=50.8196721311475, Blast_Score=123, Evalue=3e-30,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007348
- InterPro:   IPR014755
- InterPro:   IPR014756 [H]

Pfam domain/function: PF04234 CopC [H]

EC number: NA

Molecular weight: Translated: 13624; Mature: 13624

Theoretical pI: Translated: 9.66; Mature: 9.66

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFIRKVRSSCRMLSALIVLFVGLSSQQALAHAHLKAETPAADTTINAAPEALTLGFSEGI
CCHHHHHHHHHHHHHHHHHHHCCCCCHHHHEEEECCCCCCCCCEECCCCCEEEEECCCCE
ELNFSGVKVTGPDNNVVKTGDLKLDPANNTQLILPIGHALAAGKYHVSWHVVSVDGHKTK
EEEECCEEEECCCCCEEEECCEEECCCCCCEEEEEECCHHCCCEEEEEEEEEEECCCCCC
GTYSFTVK
CEEEEEEC
>Mature Secondary Structure
MFIRKVRSSCRMLSALIVLFVGLSSQQALAHAHLKAETPAADTTINAAPEALTLGFSEGI
CCHHHHHHHHHHHHHHHHHHHCCCCCHHHHEEEECCCCCCCCCEECCCCCEEEEECCCCE
ELNFSGVKVTGPDNNVVKTGDLKLDPANNTQLILPIGHALAAGKYHVSWHVVSVDGHKTK
EEEECCEEEECCCCCEEEECCEEECCCCCCEEEEEECCHHCCCEEEEEEEEEEECCCCCC
GTYSFTVK
CEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: Cu [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12471157 [H]