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The map label for this gene is fliZ [H]

Identifier: 108812440

GI number: 108812440

Start: 2562384

End: 2562893

Strand: Reverse

Name: fliZ [H]

Synonym: YPN_2279

Alternate gene names: 108812440

Gene position: 2562893-2562384 (Counterclockwise)

Preceding gene: 108812441

Following gene: 108812439

Centisome position: 56.52

GC content: 41.96

Gene sequence:

>510_bases
ATGTCAGGACTCCAGTTAAAAAAACGGCCGCTGAGCCGTTATTTAAAAGATTATAAACACAGCCAAACGCATTGCTCACA
TTGTCAGAAACAGCTTGATCGCATGGTGTTAGTTTTTCGCGGGCAAATCATCAATAAAGAGACCATCGCTGGCATGGACC
AACCTATCGACGATCCGCTTTGGTTAAAACTTCAGGAAGAACTGACGGCGTTGTGCCGCTTTTGTAGTGAGATATACTGT
AATAATTCGCTCGGCTATTTCGATATCATGCCGTTTAAACAGTATTTATTTGAGCAAACCGAGATGAGTCACAGCACTGT
TCGTGAATATGTTGTGCGTTTGCGCCGTTTAGATGAAATGCTTGTTGCGACTAATTATCCTGCAGAAAAGTTTGCCACTG
AAGCATTGTACCAGCGCATTATTGATGATATTCCCAATGCGGCTCATAACAACTACCGCATTGCTTTGCGTAAATATGAT
CAGTATTTGGCATGGCAAAAGAACTATTGA

Upstream 100 bases:

>100_bases
AAATGGCTAACCCCTTTGTCATTGGTTTGTTGCCTACCTACAACGCCAATGATTGGGGGCATATATCACGTTGTCTTACT
TTATTAATACAGGCCTTCTA

Downstream 100 bases:

>100_bases
GTCTGGTTGCATCGCGAAGTCACTAGGGTATAGGTATAGAGAGTCAATCTCTTATCCACATCAACGATAGCCATTATTTC
TTCACGCCTGGCAAATCCTC

Product: flagella biosynthesis protein FliZ

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 169; Mature: 168

Protein sequence:

>169_residues
MSGLQLKKRPLSRYLKDYKHSQTHCSHCQKQLDRMVLVFRGQIINKETIAGMDQPIDDPLWLKLQEELTALCRFCSEIYC
NNSLGYFDIMPFKQYLFEQTEMSHSTVREYVVRLRRLDEMLVATNYPAEKFATEALYQRIIDDIPNAAHNNYRIALRKYD
QYLAWQKNY

Sequences:

>Translated_169_residues
MSGLQLKKRPLSRYLKDYKHSQTHCSHCQKQLDRMVLVFRGQIINKETIAGMDQPIDDPLWLKLQEELTALCRFCSEIYC
NNSLGYFDIMPFKQYLFEQTEMSHSTVREYVVRLRRLDEMLVATNYPAEKFATEALYQRIIDDIPNAAHNNYRIALRKYD
QYLAWQKNY
>Mature_168_residues
SGLQLKKRPLSRYLKDYKHSQTHCSHCQKQLDRMVLVFRGQIINKETIAGMDQPIDDPLWLKLQEELTALCRFCSEIYCN
NSLGYFDIMPFKQYLFEQTEMSHSTVREYVVRLRRLDEMLVATNYPAEKFATEALYQRIIDDIPNAAHNNYRIALRKYDQ
YLAWQKNY

Specific function: May regulate sigma factor activity [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI87082001, Length=157, Percent_Identity=52.8662420382166, Blast_Score=170, Evalue=4e-44,

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR022523
- InterPro:   IPR004107 [H]

Pfam domain/function: PF02899 Phage_integr_N [H]

EC number: NA

Molecular weight: Translated: 20200; Mature: 20068

Theoretical pI: Translated: 8.44; Mature: 8.44

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.0 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
6.5 %Cys+Met (Translated Protein)
3.0 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
6.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSGLQLKKRPLSRYLKDYKHSQTHCSHCQKQLDRMVLVFRGQIINKETIAGMDQPIDDPL
CCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCCCCCHH
WLKLQEELTALCRFCSEIYCNNSLGYFDIMPFKQYLFEQTEMSHSTVREYVVRLRRLDEM
HHHHHHHHHHHHHHHHHHHHCCCCCCEECHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH
LVATNYPAEKFATEALYQRIIDDIPNAAHNNYRIALRKYDQYLAWQKNY
HHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
SGLQLKKRPLSRYLKDYKHSQTHCSHCQKQLDRMVLVFRGQIINKETIAGMDQPIDDPL
CCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCCCCCHH
WLKLQEELTALCRFCSEIYCNNSLGYFDIMPFKQYLFEQTEMSHSTVREYVVRLRRLDEM
HHHHHHHHHHHHHHHHHHHHCCCCCCEECHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH
LVATNYPAEKFATEALYQRIIDDIPNAAHNNYRIALRKYDQYLAWQKNY
HHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11677608; 12644504 [H]