| Definition | Yersinia pestis Nepal516, complete genome. |
|---|---|
| Accession | NC_008149 |
| Length | 4,534,590 |
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The map label for this gene is efeU [H]
Identifier: 108812430
GI number: 108812430
Start: 2550083
End: 2550931
Strand: Reverse
Name: efeU [H]
Synonym: YPN_2269
Alternate gene names: 108812430
Gene position: 2550931-2550083 (Counterclockwise)
Preceding gene: 108812431
Following gene: 108812429
Centisome position: 56.25
GC content: 49.23
Gene sequence:
>849_bases ATGTTCGTCCCATTTCTTATTATGTTTCGTGAAGGGCTGGAGGCGGCACTGATTGTCAGTCTGATTGCCAGTTACCTCAA GCGTACTCAACGCGGTCAGTGGATGGGCGCAGTCTGGGTTGGTGTGGTGGTGGCAGCGGTGCTTTGTCTCGCTATCGGTA TCTTTATCAATGAAACCACCGGTGAGTTTCCACAGAAACAGCAAGAGCTGTTCGAAGGGATTATCGCTGTAGTCGCGGTT TGCATATTAACTTATATGGTTTTCTGGATGCGCAAAGTCTCCAAGTCCGTCAAAGTTCACTTGGAAGGGGCAATTGATAA TGCGCTTAACTCTGGGCGCGGCCAAGGTTGGGCATTAGTGGCTATGGTCTTCTTTGCTGTGGCCCGAGAGGGTCTTGAAT CTGTTTTCTTCTTGTTAGCTGCCTTCCAACAGGATGTCGGTATCGGGGCACCTATTGGCGCGATACTCGGGTTGGTCTGC GCTATTTTGGTCGGAATGGCCATCTATTGGGGCGGCGTTAAATTACATTTAGCCAAATTTTTCAAATGGACCAGCCTGTT TATTCTGTTCGTTGCCGCAGGGCTTGCCGCCGGTGCTATCAGAGCCTTTCACGAAGCTGGCTTATGGAACCATTTCCAAG ATATTGCTTTTGATCTGACCGATGTGCTCTCTACTCACTCATTATTGGGGACGTTCCTTGAAGGGATGTTTGGCTATCAG GAAGCACCAACGGTGAGCGAAGTGTCTGTCTACTTTATCTATCTTATTCCGGCGTTGATTCTGTTTTTCCTTCCACCACG TTCCACTGCGGGTTCGGCTATCGCTGCGGCGCGGAAAATTAATCCATAA
Upstream 100 bases:
>100_bases TTTTTATCAGAATGATAATCACAATCGTTTTACTTTTCTTTACGTAAACTGACATGACCCGTATTTATAAATTTAATTAC CCACATCAGGGGTGTTTAGC
Downstream 100 bases:
>100_bases CTAAAATGATCAGTTCAGGGAGTTATTACATGTCTATTTGGTTCTTCCGTCGCACAGCGTTACACGCCGCGTTGTTGTCT CTGCCTGTTTTCGCTATCAG
Product: membrane protein
Products: NA
Alternate protein names: Fe(2+) ion permease efeU; Ferrous iron uptake protein [H]
Number of amino acids: Translated: 282; Mature: 282
Protein sequence:
>282_residues MFVPFLIMFREGLEAALIVSLIASYLKRTQRGQWMGAVWVGVVVAAVLCLAIGIFINETTGEFPQKQQELFEGIIAVVAV CILTYMVFWMRKVSKSVKVHLEGAIDNALNSGRGQGWALVAMVFFAVAREGLESVFFLLAAFQQDVGIGAPIGAILGLVC AILVGMAIYWGGVKLHLAKFFKWTSLFILFVAAGLAAGAIRAFHEAGLWNHFQDIAFDLTDVLSTHSLLGTFLEGMFGYQ EAPTVSEVSVYFIYLIPALILFFLPPRSTAGSAIAAARKINP
Sequences:
>Translated_282_residues MFVPFLIMFREGLEAALIVSLIASYLKRTQRGQWMGAVWVGVVVAAVLCLAIGIFINETTGEFPQKQQELFEGIIAVVAV CILTYMVFWMRKVSKSVKVHLEGAIDNALNSGRGQGWALVAMVFFAVAREGLESVFFLLAAFQQDVGIGAPIGAILGLVC AILVGMAIYWGGVKLHLAKFFKWTSLFILFVAAGLAAGAIRAFHEAGLWNHFQDIAFDLTDVLSTHSLLGTFLEGMFGYQ EAPTVSEVSVYFIYLIPALILFFLPPRSTAGSAIAAARKINP >Mature_282_residues MFVPFLIMFREGLEAALIVSLIASYLKRTQRGQWMGAVWVGVVVAAVLCLAIGIFINETTGEFPQKQQELFEGIIAVVAV CILTYMVFWMRKVSKSVKVHLEGAIDNALNSGRGQGWALVAMVFFAVAREGLESVFFLLAAFQQDVGIGAPIGAILGLVC AILVGMAIYWGGVKLHLAKFFKWTSLFILFVAAGLAAGAIRAFHEAGLWNHFQDIAFDLTDVLSTHSLLGTFLEGMFGYQ EAPTVSEVSVYFIYLIPALILFFLPPRSTAGSAIAAARKINP
Specific function: Functions only as an uptake system for Fe(2+) ion acquisition [H]
COG id: COG0672
COG function: function code P; High-affinity Fe2+/Pb2+ permease
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the oxidase-dependent Fe transporter (OFeT) (TC 9.A.10.1) family [H]
Homologues:
Organism=Saccharomyces cerevisiae, GI6320993, Length=239, Percent_Identity=28.0334728033473, Blast_Score=70, Evalue=3e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004923 [H]
Pfam domain/function: PF03239 FTR1 [H]
EC number: NA
Molecular weight: Translated: 30689; Mature: 30689
Theoretical pI: Translated: 7.56; Mature: 7.56
Prosite motif: PS00435 PEROXIDASE_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFVPFLIMFREGLEAALIVSLIASYLKRTQRGQWMGAVWVGVVVAAVLCLAIGIFINETT CCHHHHHHHHHCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCC GEFPQKQQELFEGIIAVVAVCILTYMVFWMRKVSKSVKVHLEGAIDNALNSGRGQGWALV CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHH AMVFFAVAREGLESVFFLLAAFQQDVGIGAPIGAILGLVCAILVGMAIYWGGVKLHLAKF HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCHHHHHHHHH FKWTSLFILFVAAGLAAGAIRAFHEAGLWNHFQDIAFDLTDVLSTHSLLGTFLEGMFGYQ HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC EAPTVSEVSVYFIYLIPALILFFLPPRSTAGSAIAAARKINP CCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHCCCC >Mature Secondary Structure MFVPFLIMFREGLEAALIVSLIASYLKRTQRGQWMGAVWVGVVVAAVLCLAIGIFINETT CCHHHHHHHHHCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCC GEFPQKQQELFEGIIAVVAVCILTYMVFWMRKVSKSVKVHLEGAIDNALNSGRGQGWALV CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHH AMVFFAVAREGLESVFFLLAAFQQDVGIGAPIGAILGLVCAILVGMAIYWGGVKLHLAKF HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCHHHHHHHHH FKWTSLFILFVAAGLAAGAIRAFHEAGLWNHFQDIAFDLTDVLSTHSLLGTFLEGMFGYQ HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC EAPTVSEVSVYFIYLIPALILFFLPPRSTAGSAIAAARKINP CCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA