Click here to switch to the map view.

The map label for this gene is yfbV [C]

Identifier: 108812319

GI number: 108812319

Start: 2440671

End: 2441126

Strand: Reverse

Name: yfbV [C]

Synonym: YPN_2157

Alternate gene names: 108812319

Gene position: 2441126-2440671 (Counterclockwise)

Preceding gene: 108812322

Following gene: 108812318

Centisome position: 53.83

GC content: 52.19

Gene sequence:

>456_bases
ATGACAATTAAACCCTCTGATTCGGTAAGCTGGTTTCAGGTACTCCAGCGCGGTCAGCATTATATGAAGACCTGGCCAGC
GGACAAGCGCTTGGCTCCGGTGTTCCCCGAGAATCGTGTCACGGTAGTGACCCGTTTTGGTATCCGTTTTATGCCCCCAT
TGGCCATTTTTACCCTGACCTGGCAGATAGCGCTGGGGGGGCAACTTGGGCCAGCGATCGCCACGGCGCTCTTTGCCTGC
GGTTTACCGCTGCAAGGATTATGGTGGTTAGGTAAACGGGCGATCACGCCGTTACCCCCTACGTTATTGCAGTGGTTTCA
TGAAGTGCGTCATAAACTGTTCGAAGCAGGGCAAGCGGTCGCCCCCATCGAACCGATCCCAACTTATCAGTCTTTGGCTG
ATCTGCTAAAACGTGCCTTTAAACAGTTAGACAAAACGTTTCTCGATGATTTGTAA

Upstream 100 bases:

>100_bases
GATAGCGCGGGCTAAAAACAAAATATATTTAACAGACTAATTTTTAGTTTGCGGGTTGCAAAAAAAATTTTAATCTTTGT
TTATGAAGTTGAGGTGAGCC

Downstream 100 bases:

>100_bases
GCGCGGTATTTCTCTATTTCTCTATTTCTATGTTTCTCTATTTTCTAAAGCAGTTTAAAGCAGTTTAAAGCCAAAAACAG
CTAAAACAGCAGGCGAGAGT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 151; Mature: 150

Protein sequence:

>151_residues
MTIKPSDSVSWFQVLQRGQHYMKTWPADKRLAPVFPENRVTVVTRFGIRFMPPLAIFTLTWQIALGGQLGPAIATALFAC
GLPLQGLWWLGKRAITPLPPTLLQWFHEVRHKLFEAGQAVAPIEPIPTYQSLADLLKRAFKQLDKTFLDDL

Sequences:

>Translated_151_residues
MTIKPSDSVSWFQVLQRGQHYMKTWPADKRLAPVFPENRVTVVTRFGIRFMPPLAIFTLTWQIALGGQLGPAIATALFAC
GLPLQGLWWLGKRAITPLPPTLLQWFHEVRHKLFEAGQAVAPIEPIPTYQSLADLLKRAFKQLDKTFLDDL
>Mature_150_residues
TIKPSDSVSWFQVLQRGQHYMKTWPADKRLAPVFPENRVTVVTRFGIRFMPPLAIFTLTWQIALGGQLGPAIATALFACG
LPLQGLWWLGKRAITPLPPTLLQWFHEVRHKLFEAGQAVAPIEPIPTYQSLADLLKRAFKQLDKTFLDDL

Specific function: Unknown

COG id: COG3092

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0208 family [H]

Homologues:

Organism=Escherichia coli, GI1788632, Length=151, Percent_Identity=70.1986754966888, Blast_Score=226, Evalue=5e-61,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007334 [H]

Pfam domain/function: PF04217 DUF412 [H]

EC number: NA

Molecular weight: Translated: 17122; Mature: 16991

Theoretical pI: Translated: 10.47; Mature: 10.47

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTIKPSDSVSWFQVLQRGQHYMKTWPADKRLAPVFPENRVTVVTRFGIRFMPPLAIFTLT
CCCCCCCCHHHHHHHHHCHHHHHHCCCCCCCCCCCCCCCEEEEEECCCHHCCHHHHHHHH
WQIALGGQLGPAIATALFACGLPLQGLWWLGKRAITPLPPTLLQWFHEVRHKLFEAGQAV
HHHHCCCCCHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCC
APIEPIPTYQSLADLLKRAFKQLDKTFLDDL
CCCCCCCCHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
TIKPSDSVSWFQVLQRGQHYMKTWPADKRLAPVFPENRVTVVTRFGIRFMPPLAIFTLT
CCCCCCCHHHHHHHHHCHHHHHHCCCCCCCCCCCCCCCEEEEEECCCHHCCHHHHHHHH
WQIALGGQLGPAIATALFACGLPLQGLWWLGKRAITPLPPTLLQWFHEVRHKLFEAGQAV
HHHHCCCCCHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCC
APIEPIPTYQSLADLLKRAFKQLDKTFLDDL
CCCCCCCCHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA