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The map label for this gene is yfbU [C]

Identifier: 108812318

GI number: 108812318

Start: 2439869

End: 2440363

Strand: Reverse

Name: yfbU [C]

Synonym: YPN_2156

Alternate gene names: 108812318

Gene position: 2440363-2439869 (Counterclockwise)

Preceding gene: 108812319

Following gene: 108812317

Centisome position: 53.82

GC content: 46.46

Gene sequence:

>495_bases
ATGGATATGACAAACGCCCAACGACTGATTCTGTCAAATCAGTACAAAATGATGACCATGTTGGATCCGGAAAATGCAGA
GCGTTATCGTCGCCAGCAAACCATTGTTGAGCGGGGATTTGGTCTGCAAATGCGTGAGTTGGATCGCGACTTTGGTGAGA
TGAGCGAAGATACTTGCCGTACTATCATTAATATCATGGAGATGCATCACGCTTTACAGGTCTCTTGGGGGAACTTGAAA
GAGAAGCAGGACCTGGATGAACGCCGTATTTCATTCCTCGGTTTTGATGCGGCCACGGAATCCCGTTATCTCAGTTATGT
CCGGTTTATGGTCAATACGGAAGGGCGCTATACCCACTTTGATTCAGGTACCCACGGTTTCAACTCCCAAACGCCTATGT
GGGATAAATACCAGCGGATGCTGGCTATTTGGCAATCATGTCCACGGCAATATCATTTGAGTGCCGTCGAAATTTCGCAA
ATTATTAATGCCTGA

Upstream 100 bases:

>100_bases
GTCGCCGGTAATTCCCTGTGAAAATCCCTTGTCAAATCAAAGTATGCTCCCAGCCTGTATGCGATGATTTACTCATTATT
TATGCCTTAGGAGTTTAGTG

Downstream 100 bases:

>100_bases
TTAATCTGCTGCTATTATTGCTAAGTTTGTCGACGGATAAAGACGTAACCAGAGCCGTGTTGGAAGGTCGATGCTGTTCT
GGTTCACGATACAAATAATA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 164; Mature: 164

Protein sequence:

>164_residues
MDMTNAQRLILSNQYKMMTMLDPENAERYRRQQTIVERGFGLQMRELDRDFGEMSEDTCRTIINIMEMHHALQVSWGNLK
EKQDLDERRISFLGFDAATESRYLSYVRFMVNTEGRYTHFDSGTHGFNSQTPMWDKYQRMLAIWQSCPRQYHLSAVEISQ
IINA

Sequences:

>Translated_164_residues
MDMTNAQRLILSNQYKMMTMLDPENAERYRRQQTIVERGFGLQMRELDRDFGEMSEDTCRTIINIMEMHHALQVSWGNLK
EKQDLDERRISFLGFDAATESRYLSYVRFMVNTEGRYTHFDSGTHGFNSQTPMWDKYQRMLAIWQSCPRQYHLSAVEISQ
IINA
>Mature_164_residues
MDMTNAQRLILSNQYKMMTMLDPENAERYRRQQTIVERGFGLQMRELDRDFGEMSEDTCRTIINIMEMHHALQVSWGNLK
EKQDLDERRISFLGFDAATESRYLSYVRFMVNTEGRYTHFDSGTHGFNSQTPMWDKYQRMLAIWQSCPRQYHLSAVEISQ
IINA

Specific function: Unknown

COG id: COG3013

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0304 family [H]

Homologues:

Organism=Escherichia coli, GI87082081, Length=164, Percent_Identity=80.4878048780488, Blast_Score=296, Evalue=3e-82,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005587
- InterPro:   IPR023146
- InterPro:   IPR023145
- ProDom:   PD035118 [H]

Pfam domain/function: PF03887 YfbU [H]

EC number: NA

Molecular weight: Translated: 19492; Mature: 19492

Theoretical pI: Translated: 6.35; Mature: 6.35

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
7.3 %Met     (Translated Protein)
8.5 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
7.3 %Met     (Mature Protein)
8.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDMTNAQRLILSNQYKMMTMLDPENAERYRRQQTIVERGFGLQMRELDRDFGEMSEDTCR
CCCCHHHHHHHCCCEEEEEEECCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCHHHHH
TIINIMEMHHALQVSWGNLKEKQDLDERRISFLGFDAATESRYLSYVRFMVNTEGRYTHF
HHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCEEEC
DSGTHGFNSQTPMWDKYQRMLAIWQSCPRQYHLSAVEISQIINA
CCCCCCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MDMTNAQRLILSNQYKMMTMLDPENAERYRRQQTIVERGFGLQMRELDRDFGEMSEDTCR
CCCCHHHHHHHCCCEEEEEEECCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCHHHHH
TIINIMEMHHALQVSWGNLKEKQDLDERRISFLGFDAATESRYLSYVRFMVNTEGRYTHF
HHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCEEEC
DSGTHGFNSQTPMWDKYQRMLAIWQSCPRQYHLSAVEISQIINA
CCCCCCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA