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The map label for this gene is ybiB [H]

Identifier: 108812279

GI number: 108812279

Start: 2392652

End: 2393611

Strand: Reverse

Name: ybiB [H]

Synonym: YPN_2117

Alternate gene names: 108812279

Gene position: 2393611-2392652 (Counterclockwise)

Preceding gene: 108812280

Following gene: 108812278

Centisome position: 52.79

GC content: 51.46

Gene sequence:

>960_bases
ATGGATTACAGTAAAATTATCAAAGAGGTTGGGCGCGGTAAGAACCATGCCCGTGATCTGGATCAGCCAACCGCCTATGC
ACTGTATAAAGCCATGTTGGCAGGGCAGGTACCCGCATTGGAATTGGGCGGCATCCTGATCGCCTTTCGTATCAAAGGTG
AATCAGAGCAGGAAATTCTGGGCTTTTACCAGGCGATGCAAGAGCAGGTGATGTCACTACGCGCCCCGGTGGATCGCCCA
TTACCGGTGGTGATCCCCAGCTACAACGGCGCGCGTAAACAGGCCAATTTAACCCCGTTGCTGGCACTGCTGCTGTCGCG
TCTTGGTTTGCCGGTCGTGGTCCACGGCGTGACGGAAGATAGTAGCCGGGTTACCAGTGCAGAAATTTTCCAGCAACTGA
ATATTCCCTGGTCGCTAAGTGTGCAGGAAGCTCAACAACGCTTAGATAATGGGCTGCCCGTATTTATCCCCGTCTCCGCA
CTGTCTATGCAATTGGATCAGCAATTACAACAACGCTGGCGTATGGGGGTTAGAAACAGTAGCCACACCTTGGCAAAGCT
GGCAACACCGTTTACTCATGATAAAGCGTTGCGCGTTGCCAGCGTCTCTCATCCTGAATATATGCAAAAAGTGGGGGGGT
TCTTCCAAGCAATTAGTGCTCCGGGGCTATTGCTACAGGGCACCGAAGGCGAGGTTTATGCTAATCCACTGCGCTGCCCA
CCGATTCATTATATCAATGATGGCGAACAGACAATTTTACTCGATCGTTCATCAGAATCGGTTGTCCCTGAGTTACCGTT
GTCGAAGGATGCCGTGATTACGGCACGTTGGATTGAAGGCTGTCTGGCCGGAGAGCAGCCTATTCCAGACTCGATTCTAA
AACAGTTAGCTTGTTGTCTGGTCGCGGCAGGGCAGGCTGATTCTGTCGAACTGGCGTTGCAACAAATTAAGATTGTGTAA

Upstream 100 bases:

>100_bases
GCAAGTATGAAGGGGAGAAGATTGGCGAAAGATAGAGCATGTCAGGCAAACTCAGCCCAGTTTATTGTTAACGAGAGACC
CATAGGGGGAAGGCCGCACC

Downstream 100 bases:

>100_bases
TTTTACTGTTTCACCACCAGAAAAAGCCCATCAGATGAACGGATGGGCTGAGGTTATTGACAAAGTGCCCGCGACGGAGA
GAACAGGCAGATCGTAAAGA

Product: glycosyl transferase family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 319; Mature: 319

Protein sequence:

>319_residues
MDYSKIIKEVGRGKNHARDLDQPTAYALYKAMLAGQVPALELGGILIAFRIKGESEQEILGFYQAMQEQVMSLRAPVDRP
LPVVIPSYNGARKQANLTPLLALLLSRLGLPVVVHGVTEDSSRVTSAEIFQQLNIPWSLSVQEAQQRLDNGLPVFIPVSA
LSMQLDQQLQQRWRMGVRNSSHTLAKLATPFTHDKALRVASVSHPEYMQKVGGFFQAISAPGLLLQGTEGEVYANPLRCP
PIHYINDGEQTILLDRSSESVVPELPLSKDAVITARWIEGCLAGEQPIPDSILKQLACCLVAAGQADSVELALQQIKIV

Sequences:

>Translated_319_residues
MDYSKIIKEVGRGKNHARDLDQPTAYALYKAMLAGQVPALELGGILIAFRIKGESEQEILGFYQAMQEQVMSLRAPVDRP
LPVVIPSYNGARKQANLTPLLALLLSRLGLPVVVHGVTEDSSRVTSAEIFQQLNIPWSLSVQEAQQRLDNGLPVFIPVSA
LSMQLDQQLQQRWRMGVRNSSHTLAKLATPFTHDKALRVASVSHPEYMQKVGGFFQAISAPGLLLQGTEGEVYANPLRCP
PIHYINDGEQTILLDRSSESVVPELPLSKDAVITARWIEGCLAGEQPIPDSILKQLACCLVAAGQADSVELALQQIKIV
>Mature_319_residues
MDYSKIIKEVGRGKNHARDLDQPTAYALYKAMLAGQVPALELGGILIAFRIKGESEQEILGFYQAMQEQVMSLRAPVDRP
LPVVIPSYNGARKQANLTPLLALLLSRLGLPVVVHGVTEDSSRVTSAEIFQQLNIPWSLSVQEAQQRLDNGLPVFIPVSA
LSMQLDQQLQQRWRMGVRNSSHTLAKLATPFTHDKALRVASVSHPEYMQKVGGFFQAISAPGLLLQGTEGEVYANPLRCP
PIHYINDGEQTILLDRSSESVVPELPLSKDAVITARWIEGCLAGEQPIPDSILKQLACCLVAAGQADSVELALQQIKIV

Specific function: Unknown

COG id: COG0547

COG function: function code E; Anthranilate phosphoribosyltransferase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the anthranilate phosphoribosyltransferase family [H]

Homologues:

Organism=Escherichia coli, GI1787019, Length=317, Percent_Identity=57.7287066246057, Blast_Score=380, Evalue=1e-107,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000312
- InterPro:   IPR017459
- InterPro:   IPR020072 [H]

Pfam domain/function: PF02885 Glycos_trans_3N [H]

EC number: NA

Molecular weight: Translated: 34933; Mature: 34933

Theoretical pI: Translated: 6.51; Mature: 6.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDYSKIIKEVGRGKNHARDLDQPTAYALYKAMLAGQVPALELGGILIAFRIKGESEQEIL
CCHHHHHHHHHCCCCHHHCCCCHHHHHHHHHHHHCCCCCEECCCEEEEEEECCCCHHHHH
GFYQAMQEQVMSLRAPVDRPLPVVIPSYNGARKQANLTPLLALLLSRLGLPVVVHGVTED
HHHHHHHHHHHHHHCCCCCCCCEEEECCCCCCCCCCHHHHHHHHHHHCCCCEEEEECCCC
SSRVTSAEIFQQLNIPWSLSVQEAQQRLDNGLPVFIPVSALSMQLDQQLQQRWRMGVRNS
CHHHHHHHHHHHHCCCEEEEHHHHHHHHHCCCEEEEEHHHHHHHHHHHHHHHHHHCCCCC
SHTLAKLATPFTHDKALRVASVSHPEYMQKVGGFFQAISAPGLLLQGTEGEVYANPLRCP
CHHHHHHHCCCCCCHHHHEECCCCHHHHHHHHHHHHHHCCCCEEEECCCCCEEECCCCCC
PIHYINDGEQTILLDRSSESVVPELPLSKDAVITARWIEGCLAGEQPIPDSILKQLACCL
CCEEECCCCEEEEEECCCCCCCCCCCCCCCCEEHHHHHHHHHCCCCCCCHHHHHHHHHHH
VAAGQADSVELALQQIKIV
HHCCCCCHHHHHHHHHHCC
>Mature Secondary Structure
MDYSKIIKEVGRGKNHARDLDQPTAYALYKAMLAGQVPALELGGILIAFRIKGESEQEIL
CCHHHHHHHHHCCCCHHHCCCCHHHHHHHHHHHHCCCCCEECCCEEEEEEECCCCHHHHH
GFYQAMQEQVMSLRAPVDRPLPVVIPSYNGARKQANLTPLLALLLSRLGLPVVVHGVTED
HHHHHHHHHHHHHHCCCCCCCCEEEECCCCCCCCCCHHHHHHHHHHHCCCCEEEEECCCC
SSRVTSAEIFQQLNIPWSLSVQEAQQRLDNGLPVFIPVSALSMQLDQQLQQRWRMGVRNS
CHHHHHHHHHHHHCCCEEEEHHHHHHHHHCCCEEEEEHHHHHHHHHHHHHHHHHHCCCCC
SHTLAKLATPFTHDKALRVASVSHPEYMQKVGGFFQAISAPGLLLQGTEGEVYANPLRCP
CHHHHHHHCCCCCCHHHHEECCCCHHHHHHHHHHHHHHCCCCEEEECCCCCEEECCCCCC
PIHYINDGEQTILLDRSSESVVPELPLSKDAVITARWIEGCLAGEQPIPDSILKQLACCL
CCEEECCCCEEEEEECCCCCCCCCCCCCCCCEEHHHHHHHHHCCCCCCCHHHHHHHHHHH
VAAGQADSVELALQQIKIV
HHCCCCCHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8037924; 8905232; 9278503 [H]