| Definition | Yersinia pestis Nepal516, complete genome. |
|---|---|
| Accession | NC_008149 |
| Length | 4,534,590 |
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The map label for this gene is gutB [H]
Identifier: 108812258
GI number: 108812258
Start: 2373687
End: 2374913
Strand: Reverse
Name: gutB [H]
Synonym: YPN_2096
Alternate gene names: 108812258
Gene position: 2374913-2373687 (Counterclockwise)
Preceding gene: 108812259
Following gene: 108812257
Centisome position: 52.37
GC content: 47.11
Gene sequence:
>1227_bases ATGATACTCAATGTTTACGTTGTCATTTCAATATTTATTATGAATGCGATGTCATTGTTGAGCGTTGAAGTGAGTAATTT TACTTTTGTTGGTTTGTTCAAAAATGACAACGTCAACATTGTATCCATACACCGAGTTCTGTTGCTATTGGAGGAGTTAA TGAGTCAGTTACCTGAGAAAATGAGCGCTGTCGTATGTCACGGCCCGCAGGATTATCGTTTAGAACACGTGCCGACACCT GTGCCGAAAGCCAAAGAGTTGGTGATCAAAGTGAAAGGCTGTGGGATTTGTGCAGGTGACTGTAAATGTAAGAATGGGGC AAAAATGTTTTGGGGAGAAACCCCGTGGGTAAAACCACCAGTGGTACCGGGACATGAATTCTACGGCCATATTGTGGCGC TGGGGGAAGGGACCGAATCAAAGTATAAGTTAGGCGAACGTGTGATTGCGGAACAAATAGTCCCTTGCTGGGACTGTCGC TATTGCAACTCTGGCAGCTACTGGATGTGTGAAACGCACAATATCTATGGCTTCCAAAAAGATGTCGCAGAAGGTGGCAT GGCGGAATATATGCGTTTTTCTGAGAATGCCATTGTTCACAAAATCCCAGAGAGCCTGAGTCATGAAGATGCGGTCCTGA TCGAACCCATGGCCTGTGCGATTCATACTGTGGCAAGAGGGGATATTCAACTGGATGATGTGGTCGTACTGGCGGGCGCG GGGCCGCTGGGGCTGTGCATGGTACCGGTTGCCCGCCTGAAGACACCGAAGAAATTGATTGTCATTGATACTATTGAAGA ACGCCTGGCACTGGCAAAAGCCTTTGGGGCCGATGTGGTGATCAACCCACTGAAAGAAGATGCTGACAAAATAGTGAAAT CTTTGACCGGTGGCTATGGCTGCGACGTTTACATTGAAGCGACGGGTGCGCCCATCGGTGTGACTCAAGGTTTACAAATG ATCCGCAAGCTGGGGCGTTTTGTGGAGTTCAGTGTCTTTGGTCAGGAAACTACCGTTGATTGGTCCATTATCGGCGACCG TAAAGAACTGGATATTCGCGGTGCTCACCTGGCACCTTACAGTTATGAAATTGCCACCGATCTCTTTGAACGTGGTCTGG TTACCTCAAAAGGTATCGTCACCCACAGTTATTCATTAGATGATTGGGAAAAGGCTTTTGAGCTAGCGGACTCCACGAAT TCTATTAAGGTCATTCTGGTTCCTTAA
Upstream 100 bases:
>100_bases GACGGTTGTTGCGATCAGGATCTAAATTAATGACTTTGTTTAACATCAATTTAACAGCGTGTGACTTTGTTCAACAAATA GTTTCTGCCAATTTGGTTAT
Downstream 100 bases:
>100_bases TTATTGTTAGTAATTATCTGCTGATGTTTGATATTGACGGTTTATTTATCTTACTCAAAGGTAAAGTACCGTTTTATATC ATGTGGGATATTAACTTTTT
Product: zinc-binding dehydrogenase
Products: NA
Alternate protein names: Glucitol dehydrogenase; L-iditol 2-dehydrogenase [H]
Number of amino acids: Translated: 408; Mature: 408
Protein sequence:
>408_residues MILNVYVVISIFIMNAMSLLSVEVSNFTFVGLFKNDNVNIVSIHRVLLLLEELMSQLPEKMSAVVCHGPQDYRLEHVPTP VPKAKELVIKVKGCGICAGDCKCKNGAKMFWGETPWVKPPVVPGHEFYGHIVALGEGTESKYKLGERVIAEQIVPCWDCR YCNSGSYWMCETHNIYGFQKDVAEGGMAEYMRFSENAIVHKIPESLSHEDAVLIEPMACAIHTVARGDIQLDDVVVLAGA GPLGLCMVPVARLKTPKKLIVIDTIEERLALAKAFGADVVINPLKEDADKIVKSLTGGYGCDVYIEATGAPIGVTQGLQM IRKLGRFVEFSVFGQETTVDWSIIGDRKELDIRGAHLAPYSYEIATDLFERGLVTSKGIVTHSYSLDDWEKAFELADSTN SIKVILVP
Sequences:
>Translated_408_residues MILNVYVVISIFIMNAMSLLSVEVSNFTFVGLFKNDNVNIVSIHRVLLLLEELMSQLPEKMSAVVCHGPQDYRLEHVPTP VPKAKELVIKVKGCGICAGDCKCKNGAKMFWGETPWVKPPVVPGHEFYGHIVALGEGTESKYKLGERVIAEQIVPCWDCR YCNSGSYWMCETHNIYGFQKDVAEGGMAEYMRFSENAIVHKIPESLSHEDAVLIEPMACAIHTVARGDIQLDDVVVLAGA GPLGLCMVPVARLKTPKKLIVIDTIEERLALAKAFGADVVINPLKEDADKIVKSLTGGYGCDVYIEATGAPIGVTQGLQM IRKLGRFVEFSVFGQETTVDWSIIGDRKELDIRGAHLAPYSYEIATDLFERGLVTSKGIVTHSYSLDDWEKAFELADSTN SIKVILVP >Mature_408_residues MILNVYVVISIFIMNAMSLLSVEVSNFTFVGLFKNDNVNIVSIHRVLLLLEELMSQLPEKMSAVVCHGPQDYRLEHVPTP VPKAKELVIKVKGCGICAGDCKCKNGAKMFWGETPWVKPPVVPGHEFYGHIVALGEGTESKYKLGERVIAEQIVPCWDCR YCNSGSYWMCETHNIYGFQKDVAEGGMAEYMRFSENAIVHKIPESLSHEDAVLIEPMACAIHTVARGDIQLDDVVVLAGA GPLGLCMVPVARLKTPKKLIVIDTIEERLALAKAFGADVVINPLKEDADKIVKSLTGGYGCDVYIEATGAPIGVTQGLQM IRKLGRFVEFSVFGQETTVDWSIIGDRKELDIRGAHLAPYSYEIATDLFERGLVTSKGIVTHSYSLDDWEKAFELADSTN SIKVILVP
Specific function: Reduces glucitol to fructose [H]
COG id: COG1063
COG function: function code ER; Threonine dehydrogenase and related Zn-dependent dehydrogenases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the zinc-containing alcohol dehydrogenase family [H]
Homologues:
Organism=Homo sapiens, GI156627571, Length=355, Percent_Identity=30.1408450704225, Blast_Score=153, Evalue=3e-37, Organism=Homo sapiens, GI71565154, Length=383, Percent_Identity=25.3263707571802, Blast_Score=74, Evalue=2e-13, Organism=Homo sapiens, GI4501929, Length=381, Percent_Identity=24.1469816272966, Blast_Score=70, Evalue=5e-12, Organism=Escherichia coli, GI1787863, Length=351, Percent_Identity=31.9088319088319, Blast_Score=149, Evalue=5e-37, Organism=Escherichia coli, GI1788073, Length=353, Percent_Identity=28.328611898017, Blast_Score=147, Evalue=9e-37, Organism=Escherichia coli, GI1790045, Length=337, Percent_Identity=30.8605341246291, Blast_Score=145, Evalue=6e-36, Organism=Escherichia coli, GI1788075, Length=361, Percent_Identity=28.2548476454294, Blast_Score=122, Evalue=3e-29, Organism=Escherichia coli, GI87082125, Length=359, Percent_Identity=29.5264623955432, Blast_Score=119, Evalue=4e-28, Organism=Escherichia coli, GI226510992, Length=347, Percent_Identity=27.3775216138329, Blast_Score=116, Evalue=2e-27, Organism=Escherichia coli, GI1788407, Length=345, Percent_Identity=26.0869565217391, Blast_Score=111, Evalue=7e-26, Organism=Escherichia coli, GI1786825, Length=404, Percent_Identity=25.7425742574257, Blast_Score=110, Evalue=2e-25, Organism=Escherichia coli, GI1790718, Length=324, Percent_Identity=25.6172839506173, Blast_Score=100, Evalue=3e-22, Organism=Escherichia coli, GI87081918, Length=222, Percent_Identity=33.7837837837838, Blast_Score=78, Evalue=9e-16, Organism=Escherichia coli, GI1786552, Length=362, Percent_Identity=30.1104972375691, Blast_Score=78, Evalue=1e-15, Organism=Caenorhabditis elegans, GI17562876, Length=361, Percent_Identity=30.4709141274238, Blast_Score=154, Evalue=5e-38, Organism=Caenorhabditis elegans, GI17562878, Length=357, Percent_Identity=28.8515406162465, Blast_Score=150, Evalue=9e-37, Organism=Caenorhabditis elegans, GI25146526, Length=389, Percent_Identity=23.9074550128535, Blast_Score=74, Evalue=1e-13, Organism=Caenorhabditis elegans, GI71997431, Length=389, Percent_Identity=23.6503856041131, Blast_Score=70, Evalue=2e-12, Organism=Saccharomyces cerevisiae, GI6323099, Length=352, Percent_Identity=28.4090909090909, Blast_Score=122, Evalue=1e-28, Organism=Saccharomyces cerevisiae, GI6319955, Length=364, Percent_Identity=28.021978021978, Blast_Score=120, Evalue=4e-28, Organism=Saccharomyces cerevisiae, GI6322619, Length=364, Percent_Identity=27.7472527472527, Blast_Score=118, Evalue=1e-27, Organism=Saccharomyces cerevisiae, GI6319258, Length=373, Percent_Identity=26.0053619302949, Blast_Score=89, Evalue=9e-19, Organism=Saccharomyces cerevisiae, GI6319257, Length=300, Percent_Identity=25.6666666666667, Blast_Score=87, Evalue=5e-18, Organism=Saccharomyces cerevisiae, GI6324486, Length=334, Percent_Identity=26.6467065868263, Blast_Score=74, Evalue=6e-14, Organism=Saccharomyces cerevisiae, GI6323980, Length=195, Percent_Identity=29.7435897435897, Blast_Score=72, Evalue=2e-13, Organism=Saccharomyces cerevisiae, GI6323729, Length=347, Percent_Identity=25.3602305475504, Blast_Score=71, Evalue=4e-13, Organism=Saccharomyces cerevisiae, GI6320033, Length=278, Percent_Identity=26.2589928057554, Blast_Score=70, Evalue=7e-13, Organism=Saccharomyces cerevisiae, GI6323961, Length=333, Percent_Identity=26.1261261261261, Blast_Score=68, Evalue=2e-12, Organism=Saccharomyces cerevisiae, GI6319621, Length=253, Percent_Identity=28.4584980237154, Blast_Score=64, Evalue=5e-11, Organism=Drosophila melanogaster, GI17137530, Length=348, Percent_Identity=27.5862068965517, Blast_Score=124, Evalue=1e-28, Organism=Drosophila melanogaster, GI17737897, Length=347, Percent_Identity=27.9538904899135, Blast_Score=121, Evalue=7e-28, Organism=Drosophila melanogaster, GI17737895, Length=385, Percent_Identity=24.6753246753247, Blast_Score=73, Evalue=3e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013149 - InterPro: IPR013154 - InterPro: IPR002085 - InterPro: IPR002328 - InterPro: IPR011032 - InterPro: IPR016040 [H]
Pfam domain/function: PF08240 ADH_N; PF00107 ADH_zinc_N [H]
EC number: =1.1.1.14 [H]
Molecular weight: Translated: 44954; Mature: 44954
Theoretical pI: Translated: 5.44; Mature: 5.44
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.9 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 5.9 %Cys+Met (Translated Protein) 2.9 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 5.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MILNVYVVISIFIMNAMSLLSVEVSNFTFVGLFKNDNVNIVSIHRVLLLLEELMSQLPEK CEEEHHHHHHHHHHHHHHHHEEEECCEEEEEEEECCCEEEEHHHHHHHHHHHHHHHCHHH MSAVVCHGPQDYRLEHVPTPVPKAKELVIKVKGCGICAGDCKCKNGAKMFWGETPWVKPP HCEEEEECCCCCCCCCCCCCCCCCCEEEEEEECCEEEECCCCCCCCCEEEECCCCCCCCC VVPGHEFYGHIVALGEGTESKYKLGERVIAEQIVPCWDCRYCNSGSYWMCETHNIYGFQK CCCCCHHCEEEEEEECCCCHHHHHHHHHHHHHCCCCCCCEEECCCCEEEEECCCCCCCHH DVAEGGMAEYMRFSENAIVHKIPESLSHEDAVLIEPMACAIHTVARGDIQLDDVVVLAGA HHHCCCHHHHHHHCCCCHHHHCHHHCCCCCEEEECHHHHHHHHHHCCCEEECCEEEEECC GPLGLCMVPVARLKTPKKLIVIDTIEERLALAKAFGADVVINPLKEDADKIVKSLTGGYG CCHHHHHHHHHHCCCCCEEEEEECHHHHHHHHHHCCCCEEECCHHHHHHHHHHHHCCCCC CDVYIEATGAPIGVTQGLQMIRKLGRFVEFSVFGQETTVDWSIIGDRKELDIRGAHLAPY EEEEEEECCCCCCHHHHHHHHHHHHHHEEEEEECCCEEEEEEEECCCCCEEECCCEECCC SYEIATDLFERGLVTSKGIVTHSYSLDDWEKAFELADSTNSIKVILVP HHHHHHHHHHCCCCCCCCEEEEECCCHHHHHHHHHCCCCCCEEEEEEC >Mature Secondary Structure MILNVYVVISIFIMNAMSLLSVEVSNFTFVGLFKNDNVNIVSIHRVLLLLEELMSQLPEK CEEEHHHHHHHHHHHHHHHHEEEECCEEEEEEEECCCEEEEHHHHHHHHHHHHHHHCHHH MSAVVCHGPQDYRLEHVPTPVPKAKELVIKVKGCGICAGDCKCKNGAKMFWGETPWVKPP HCEEEEECCCCCCCCCCCCCCCCCCEEEEEEECCEEEECCCCCCCCCEEEECCCCCCCCC VVPGHEFYGHIVALGEGTESKYKLGERVIAEQIVPCWDCRYCNSGSYWMCETHNIYGFQK CCCCCHHCEEEEEEECCCCHHHHHHHHHHHHHCCCCCCCEEECCCCEEEEECCCCCCCHH DVAEGGMAEYMRFSENAIVHKIPESLSHEDAVLIEPMACAIHTVARGDIQLDDVVVLAGA HHHCCCHHHHHHHCCCCHHHHCHHHCCCCCEEEECHHHHHHHHHHCCCEEECCEEEEECC GPLGLCMVPVARLKTPKKLIVIDTIEERLALAKAFGADVVINPLKEDADKIVKSLTGGYG CCHHHHHHHHHHCCCCCEEEEEECHHHHHHHHHHCCCCEEECCHHHHHHHHHHHHCCCCC CDVYIEATGAPIGVTQGLQMIRKLGRFVEFSVFGQETTVDWSIIGDRKELDIRGAHLAPY EEEEEEECCCCCCHHHHHHHHHHHHHHEEEEEECCCEEEEEEEECCCCCEEECCCEECCC SYEIATDLFERGLVTSKGIVTHSYSLDDWEKAFELADSTNSIKVILVP HHHHHHHHHHCCCCCCCCEEEEECCCHHHHHHHHHCCCCCCEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 10086842; 11058132 [H]