Definition Yersinia pestis Nepal516, complete genome.
Accession NC_008149
Length 4,534,590

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The map label for this gene is 108811382

Identifier: 108811382

GI number: 108811382

Start: 1385949

End: 1386527

Strand: Reverse

Name: 108811382

Synonym: YPN_1219

Alternate gene names: NA

Gene position: 1386527-1385949 (Counterclockwise)

Preceding gene: 108811383

Following gene: 108811380

Centisome position: 30.58

GC content: 36.96

Gene sequence:

>579_bases
TTGAACGCTGCTTGCAGCGACATCAAAGAGGTGAGACCCATAGATGGGCCGAGTAACGAAAGCAGCCGACATACATGCAG
CTTGAAGTCTGTCGGGTATATATTATTAACCCTCAACAAAGGTACTATAATGAATAAATATAATAGCGTATTCCTCCTTG
TTACTCTCAGTGCTGCCATTATCTCTTTCAATACTCGCGCTGCAGAACATGGAATGATCACATTGAATCAAAACTCGGGT
AACCTGCAACCTATTAGCCCCCTAGTTCTCTTGGCCGCTGAAAATGGGGTTCTCCCTTCATTTGAAGTTCAACATTTAGC
AAATAGTTATAATCGATATGGCAACAAAGTAAAAATAGAGTTTACCATGAGCTCGGAACAATTAATAAATTATTATATTT
ACATAACCAATAGCACAGGGGTTAATTATTATGAAACCTCTGGATTTATTAATAACTCACAAAAAAACATCAATCTGGAA
ATTGAAGACATCCCTTTGGGGAATTATAACCTAGTCATCAACGCCTATAATAATGATCAGAACTCAATGATAAAGAGATA
TCAGATCGATATAAAATAG

Upstream 100 bases:

>100_bases
AGGCGGCAATTGAGTAAGTCCTCAGAATTTATTTTAAGGTCAACAACAAGTCAGTGACTTGGATGACAACGGTTATTGAC
ACCTAGCGCCAGAAGCAGAT

Downstream 100 bases:

>100_bases
CAGGTAATAAAAATAACTTCATCAAGTCGATGATTAAATAAAATAAACTATATACCCAAAATAATTTGAGTTACAGAAAG
GCAACAAGGGAGTAAGTTCC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 192; Mature: 192

Protein sequence:

>192_residues
MNAACSDIKEVRPIDGPSNESSRHTCSLKSVGYILLTLNKGTIMNKYNSVFLLVTLSAAIISFNTRAAEHGMITLNQNSG
NLQPISPLVLLAAENGVLPSFEVQHLANSYNRYGNKVKIEFTMSSEQLINYYIYITNSTGVNYYETSGFINNSQKNINLE
IEDIPLGNYNLVINAYNNDQNSMIKRYQIDIK

Sequences:

>Translated_192_residues
MNAACSDIKEVRPIDGPSNESSRHTCSLKSVGYILLTLNKGTIMNKYNSVFLLVTLSAAIISFNTRAAEHGMITLNQNSG
NLQPISPLVLLAAENGVLPSFEVQHLANSYNRYGNKVKIEFTMSSEQLINYYIYITNSTGVNYYETSGFINNSQKNINLE
IEDIPLGNYNLVINAYNNDQNSMIKRYQIDIK
>Mature_192_residues
MNAACSDIKEVRPIDGPSNESSRHTCSLKSVGYILLTLNKGTIMNKYNSVFLLVTLSAAIISFNTRAAEHGMITLNQNSG
NLQPISPLVLLAAENGVLPSFEVQHLANSYNRYGNKVKIEFTMSSEQLINYYIYITNSTGVNYYETSGFINNSQKNINLE
IEDIPLGNYNLVINAYNNDQNSMIKRYQIDIK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21472; Mature: 21472

Theoretical pI: Translated: 6.78; Mature: 6.78

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNAACSDIKEVRPIDGPSNESSRHTCSLKSVGYILLTLNKGTIMNKYNSVFLLVTLSAAI
CCCCHHHHHHCCCCCCCCCCCCCEEEEECCCCEEEEEECCCEEEECCCCEEEEEEEEEEE
ISFNTRAAEHGMITLNQNSGNLQPISPLVLLAAENGVLPSFEVQHLANSYNRYGNKVKIE
EEECCCCCCCCEEEEECCCCCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHCCCEEEEE
FTMSSEQLINYYIYITNSTGVNYYETSGFINNSQKNINLEIEDIPLGNYNLVINAYNNDQ
EEECCCCEEEEEEEEECCCCCCEEECCCEEECCCCEEEEEEEEECCCCEEEEEEEEECCC
NSMIKRYQIDIK
HHEEEEEEEEEC
>Mature Secondary Structure
MNAACSDIKEVRPIDGPSNESSRHTCSLKSVGYILLTLNKGTIMNKYNSVFLLVTLSAAI
CCCCHHHHHHCCCCCCCCCCCCCEEEEECCCCEEEEEECCCEEEECCCCEEEEEEEEEEE
ISFNTRAAEHGMITLNQNSGNLQPISPLVLLAAENGVLPSFEVQHLANSYNRYGNKVKIE
EEECCCCCCCCEEEEECCCCCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHCCCEEEEE
FTMSSEQLINYYIYITNSTGVNYYETSGFINNSQKNINLEIEDIPLGNYNLVINAYNNDQ
EEECCCCEEEEEEEEECCCCCCEEECCCEEECCCCEEEEEEEEECCCCEEEEEEEEECCC
NSMIKRYQIDIK
HHEEEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA