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The map label for this gene is hdeB [H]

Identifier: 108811322

GI number: 108811322

Start: 1324838

End: 1325167

Strand: Reverse

Name: hdeB [H]

Synonym: YPN_1159

Alternate gene names: 108811322

Gene position: 1325167-1324838 (Counterclockwise)

Preceding gene: 108811324

Following gene: 108811311

Centisome position: 29.22

GC content: 40.91

Gene sequence:

>330_bases
ATGTCCTACAAATCACTGCGTAATATTGCACTGACTGGTTTGCTTCTTTCCACCGCGGCAACTACCTTTGCAGCAACGCC
GACAGGGACCACACCAAGTGATATGACTTGCAAAGAGTTCTTGGATCTAAATCCTAAGTCATTTACTCCGGTAGTTTATT
GGGTATTGAACGATGATACCCAATATAAACAAGGTGATTATGTTGATCTGCATGAGACCGATACTCTCGTGACACCTAAA
GTGGTCGAGGTATGTAAGAAGGCCCCAGAAAGTAAACTGTCTGAAATTAAACAGGACATTTTAAATTTCGCCAAAAAACA
CAATATGTAA

Upstream 100 bases:

>100_bases
AAAATCATTGAGAGTAGCTAACGCACATGCAGCTTGAAGTATGATGGGTATAAAGGTTATTACCGCATTTTTATTTAACA
AGTAAATAAGGAAAATAAAC

Downstream 100 bases:

>100_bases
TAACAAGTTCAATATGTAATAACAAGTTCAATATGTAACCTGTAAAAAAAAGACACTCATTAAGCGTTATCGGTTAATGA
GTGTCTCTATTTGTTAGCCT

Product: acid-resistance protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 109; Mature: 108

Protein sequence:

>109_residues
MSYKSLRNIALTGLLLSTAATTFAATPTGTTPSDMTCKEFLDLNPKSFTPVVYWVLNDDTQYKQGDYVDLHETDTLVTPK
VVEVCKKAPESKLSEIKQDILNFAKKHNM

Sequences:

>Translated_109_residues
MSYKSLRNIALTGLLLSTAATTFAATPTGTTPSDMTCKEFLDLNPKSFTPVVYWVLNDDTQYKQGDYVDLHETDTLVTPK
VVEVCKKAPESKLSEIKQDILNFAKKHNM
>Mature_108_residues
SYKSLRNIALTGLLLSTAATTFAATPTGTTPSDMTCKEFLDLNPKSFTPVVYWVLNDDTQYKQGDYVDLHETDTLVTPKV
VEVCKKAPESKLSEIKQDILNFAKKHNM

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Periplasmic Protein [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI87082279, Length=107, Percent_Identity=43.9252336448598, Blast_Score=88, Evalue=1e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010486 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 12174; Mature: 12043

Theoretical pI: Translated: 6.51; Mature: 6.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSYKSLRNIALTGLLLSTAATTFAATPTGTTPSDMTCKEFLDLNPKSFTPVVYWVLNDDT
CCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHCCCCCCCCCEEEEEECCCC
QYKQGDYVDLHETDTLVTPKVVEVCKKAPESKLSEIKQDILNFAKKHNM
CCCCCCEEECCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
SYKSLRNIALTGLLLSTAATTFAATPTGTTPSDMTCKEFLDLNPKSFTPVVYWVLNDDT
CHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHCCCCCCCCCEEEEEECCCC
QYKQGDYVDLHETDTLVTPKVVEVCKKAPESKLSEIKQDILNFAKKHNM
CCCCCCEEECCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12471157 [H]