Definition | Yersinia pestis Nepal516, complete genome. |
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Accession | NC_008149 |
Length | 4,534,590 |
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The map label for this gene is 108811311
Identifier: 108811311
GI number: 108811311
Start: 1315404
End: 1315580
Strand: Reverse
Name: 108811311
Synonym: YPN_1148
Alternate gene names: NA
Gene position: 1315580-1315404 (Counterclockwise)
Preceding gene: 108811322
Following gene: 108811304
Centisome position: 29.01
GC content: 24.29
Gene sequence:
>177_bases TTGGAAATTTCACCATTATTTTATAACTTTATAGTCAAAAGTATAAAATCAGTTAAAATTAAAACAAAAAACTTTAAAAT CAATAAATTAAAAAGCACCCAATCTGACGCAGCATTTACCATCAACACCATGAAAAACCTGTTTTACATTCAAAAAAACG TAAAATCTTATGGATAA
Upstream 100 bases:
>100_bases ATCATGAGTTAGATTTTACATCATTATTTTTGTAAAAAAAGACGCTAAAAATCAATTCATTGCTATAGATGCTTCACCTA TAAAGAATATAGGCTAAAAC
Downstream 100 bases:
>100_bases GATGGCTAACGGCAAGAGAGCGCCTGAGGGAATCACCCCCGTAATCAGCAATCAATAAATTCGCATTCCATGCTAGAGTT ATAATGAACGCCAAGTCTAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 58; Mature: 58
Protein sequence:
>58_residues MEISPLFYNFIVKSIKSVKIKTKNFKINKLKSTQSDAAFTINTMKNLFYIQKNVKSYG
Sequences:
>Translated_58_residues MEISPLFYNFIVKSIKSVKIKTKNFKINKLKSTQSDAAFTINTMKNLFYIQKNVKSYG >Mature_58_residues MEISPLFYNFIVKSIKSVKIKTKNFKINKLKSTQSDAAFTINTMKNLFYIQKNVKSYG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 6753; Mature: 6753
Theoretical pI: Translated: 10.80; Mature: 10.80
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEISPLFYNFIVKSIKSVKIKTKNFKINKLKSTQSDAAFTINTMKNLFYIQKNVKSYG CCCCHHHHHHHHHHHHHCEEECCCEEEEECCCCCCCCEEEHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MEISPLFYNFIVKSIKSVKIKTKNFKINKLKSTQSDAAFTINTMKNLFYIQKNVKSYG CCCCHHHHHHHHHHHHHCEEECCCEEEEECCCCCCCCEEEHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA