Definition Yersinia pestis Nepal516, complete genome.
Accession NC_008149
Length 4,534,590

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The map label for this gene is 108811240

Identifier: 108811240

GI number: 108811240

Start: 1239660

End: 1239947

Strand: Reverse

Name: 108811240

Synonym: YPN_1076

Alternate gene names: NA

Gene position: 1239947-1239660 (Counterclockwise)

Preceding gene: 108811241

Following gene: 108811238

Centisome position: 27.34

GC content: 42.71

Gene sequence:

>288_bases
GTGGCTCGGGGTGATCACCAGCGTATTAACATAGTATATGGCTTCGGTGTCCATTGGTGCCATTTTCAATTTTTTGAATG
TTGTTTAAAACATAAAGGTGTCGCCATGAAAACCAGCCATCGGGCAATCAGTACCGTTCGTGAAGCCCGAAAGGCGATTC
GTAGTGGTTATGACAAACCCATCCCAAAGAAAGGCATTAAAACTGGTTTTAAAATTGATAAGCCACCAGATGAAATGACC
ACGATAGAGGTTCACATCACGCAGGTGGCTTATTTAATATCAGTGTAG

Upstream 100 bases:

>100_bases
ACCTCGCGCTTTATCTCATTCTGATCGAAAAAGACCTGATTGTGATTATCTGGGAACGTGCAGATCTGATGGAAGGTTAT
CACTATCCACGTTAGTTGTT

Downstream 100 bases:

>100_bases
ACTTCAATCAATACACACTACAACGGCCTGTAAATATCCCTGTAGTACGTTAATCTTTTACGAAAAAAATGACGTTCATC
CACAGAAAGCTTTGCTTCAA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 95; Mature: 94

Protein sequence:

>95_residues
MARGDHQRINIVYGFGVHWCHFQFFECCLKHKGVAMKTSHRAISTVREARKAIRSGYDKPIPKKGIKTGFKIDKPPDEMT
TIEVHITQVAYLISV

Sequences:

>Translated_95_residues
MARGDHQRINIVYGFGVHWCHFQFFECCLKHKGVAMKTSHRAISTVREARKAIRSGYDKPIPKKGIKTGFKIDKPPDEMT
TIEVHITQVAYLISV
>Mature_94_residues
ARGDHQRINIVYGFGVHWCHFQFFECCLKHKGVAMKTSHRAISTVREARKAIRSGYDKPIPKKGIKTGFKIDKPPDEMTT
IEVHITQVAYLISV

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 10871; Mature: 10740

Theoretical pI: Translated: 10.26; Mature: 10.26

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.2 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
6.3 %Cys+Met (Translated Protein)
3.2 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
5.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MARGDHQRINIVYGFGVHWCHFQFFECCLKHKGVAMKTSHRAISTVREARKAIRSGYDKP
CCCCCCCEEEEEEECCCHHHHHHHHHHHHHCCCCEECCHHHHHHHHHHHHHHHHCCCCCC
IPKKGIKTGFKIDKPPDEMTTIEVHITQVAYLISV
CCCCCCCCCCCCCCCCCCEEEEEEHHHHHHHHHCC
>Mature Secondary Structure 
ARGDHQRINIVYGFGVHWCHFQFFECCLKHKGVAMKTSHRAISTVREARKAIRSGYDKP
CCCCCCEEEEEEECCCHHHHHHHHHHHHHCCCCEECCHHHHHHHHHHHHHHHHCCCCCC
IPKKGIKTGFKIDKPPDEMTTIEVHITQVAYLISV
CCCCCCCCCCCCCCCCCCEEEEEEHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA