Definition | Yersinia pestis Nepal516, complete genome. |
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Accession | NC_008149 |
Length | 4,534,590 |
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The map label for this gene is ybaM [C]
Identifier: 108811127
GI number: 108811127
Start: 1119792
End: 1119947
Strand: Reverse
Name: ybaM [C]
Synonym: YPN_0962
Alternate gene names: 108811127
Gene position: 1119947-1119792 (Counterclockwise)
Preceding gene: 108811128
Following gene: 108811123
Centisome position: 24.7
GC content: 43.59
Gene sequence:
>156_bases ATGTCAGTTGAACAAGCACCACCTGAACTACAACTGGCAGTAGATCTTATCTATCTGCTGGAATGTAACGAAATAGCACC GGAAACGGCTCTCGCAGCATTGGCTATCGTACAACTTGATTACCAACGTAAACTTCGCCATAAAGAATCAGACTGA
Upstream 100 bases:
>100_bases AAATACTTTCTAAATGGAAACCTAGCGAAGCTAGCACTGGTGAGTGACTGCTCTGCTCCGCTTCTTTCGTTAATTGAAAC TTTAAATATTGGTCACATAT
Downstream 100 bases:
>100_bases ACCTACTACTTCTGATGTGTACTGAGGCGACTCGGCACGACATCGCCTCTGCTATTCCCGCTTTTATGCTGCTGGTGCGA TAACATGGGTTATCTCACGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 51; Mature: 50
Protein sequence:
>51_residues MSVEQAPPELQLAVDLIYLLECNEIAPETALAALAIVQLDYQRKLRHKESD
Sequences:
>Translated_51_residues MSVEQAPPELQLAVDLIYLLECNEIAPETALAALAIVQLDYQRKLRHKESD >Mature_50_residues SVEQAPPELQLAVDLIYLLECNEIAPETALAALAIVQLDYQRKLRHKESD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 5751; Mature: 5619
Theoretical pI: Translated: 4.17; Mature: 4.17
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSVEQAPPELQLAVDLIYLLECNEIAPETALAALAIVQLDYQRKLRHKESD CCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure SVEQAPPELQLAVDLIYLLECNEIAPETALAALAIVQLDYQRKLRHKESD CCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA