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The map label for this gene is yajL [H]

Identifier: 108811081

GI number: 108811081

Start: 1067036

End: 1067626

Strand: Reverse

Name: yajL [H]

Synonym: YPN_0916

Alternate gene names: 108811081

Gene position: 1067626-1067036 (Counterclockwise)

Preceding gene: 108811082

Following gene: 108811078

Centisome position: 23.54

GC content: 51.1

Gene sequence:

>591_bases
ATGAGCGTATCGGCGCTGGTTTGCCTGGCTCCTGGTAGCGAGGAAACCGAGGCAGTCACAACTATTGATATTCTGGTGCG
CGCAGGCATCAATGTCACAACCGCCAGTGTCGCGGGTGATGGCGCACTGGAGATTATCTGTTCGCGCGGAGTGAGGCTGT
TGGCCGATACCCGTTTAGTGGATGTCGCCGATCAAAAATTTGATGTGATAGTGCTCCCCGGTGGGATTAAAGGCGCGGAG
TGCTTTCGCGATAGTCCGTTGCTGGTTGCAACAGTCCGACAAACCCATAATGAGGGCCGTTTGGTTGCCGCAATTTGTGC
GGCTCCCGCACTGGTGCTCGAGCATCACCAGTTATTTCCCGTAGGGAATATGACCGGGTTCCCCTCACTAAAAGATAAAA
TAGCCCCAAATAAATGGATGGATCAACGCGTCGTCTACGATAGACGGGTTAATTTAGTCACCAGCCAAGGGCCAGGAACA
TCCATCGATTTCGCTCTAAAAATTGTGTTTTTATTACTTGGACGGGAAAAGGCGGAAGAAATTGCCTGGCAGCTAGTGTT
GCCGCCAGGAATTTATAATTATCGGGAATGA

Upstream 100 bases:

>100_bases
TATATAACCGGTTATTTACTGCGGCGCGCCCGTAGTCATGGTATGGCATTACCAGAAAATGCTCGACTGTATGAATTAAT
CAAACGTAAGGAAAGTGATT

Downstream 100 bases:

>100_bases
TGGCCGCCGTAACGGTTACTGCGCAAATCCTGAATGGCAACGCGCAGTGCCGTCAATTATCAAAAAACTAAGGGCGATAG
ACTTTCACGTTGGTATACCC

Product: DJ-1 family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 196; Mature: 195

Protein sequence:

>196_residues
MSVSALVCLAPGSEETEAVTTIDILVRAGINVTTASVAGDGALEIICSRGVRLLADTRLVDVADQKFDVIVLPGGIKGAE
CFRDSPLLVATVRQTHNEGRLVAAICAAPALVLEHHQLFPVGNMTGFPSLKDKIAPNKWMDQRVVYDRRVNLVTSQGPGT
SIDFALKIVFLLLGREKAEEIAWQLVLPPGIYNYRE

Sequences:

>Translated_196_residues
MSVSALVCLAPGSEETEAVTTIDILVRAGINVTTASVAGDGALEIICSRGVRLLADTRLVDVADQKFDVIVLPGGIKGAE
CFRDSPLLVATVRQTHNEGRLVAAICAAPALVLEHHQLFPVGNMTGFPSLKDKIAPNKWMDQRVVYDRRVNLVTSQGPGT
SIDFALKIVFLLLGREKAEEIAWQLVLPPGIYNYRE
>Mature_195_residues
SVSALVCLAPGSEETEAVTTIDILVRAGINVTTASVAGDGALEIICSRGVRLLADTRLVDVADQKFDVIVLPGGIKGAEC
FRDSPLLVATVRQTHNEGRLVAAICAAPALVLEHHQLFPVGNMTGFPSLKDKIAPNKWMDQRVVYDRRVNLVTSQGPGTS
IDFALKIVFLLLGREKAEEIAWQLVLPPGIYNYRE

Specific function: Involved in biogenesis of ribosomal proteins, probably as a ribosomal protein-folding chaperone. Interacts with ribosomal subunits, ribosomes and polysomes. Confers resistance to oxidative stress [H]

COG id: COG0693

COG function: function code R; Putative intracellular protease/amidase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase C56 family [H]

Homologues:

Organism=Homo sapiens, GI183227678, Length=190, Percent_Identity=40, Blast_Score=112, Evalue=1e-25,
Organism=Homo sapiens, GI31543380, Length=190, Percent_Identity=40, Blast_Score=112, Evalue=1e-25,
Organism=Escherichia coli, GI87081736, Length=196, Percent_Identity=73.9795918367347, Blast_Score=296, Evalue=4e-82,
Organism=Caenorhabditis elegans, GI17531319, Length=187, Percent_Identity=39.0374331550802, Blast_Score=120, Evalue=5e-28,
Organism=Caenorhabditis elegans, GI17558714, Length=187, Percent_Identity=36.8983957219251, Blast_Score=106, Evalue=7e-24,
Organism=Drosophila melanogaster, GI28571932, Length=188, Percent_Identity=45.7446808510638, Blast_Score=150, Evalue=6e-37,
Organism=Drosophila melanogaster, GI24653499, Length=187, Percent_Identity=39.572192513369, Blast_Score=105, Evalue=1e-23,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006287
- InterPro:   IPR002818 [H]

Pfam domain/function: PF01965 DJ-1_PfpI [H]

EC number: NA

Molecular weight: Translated: 21178; Mature: 21047

Theoretical pI: Translated: 5.72; Mature: 5.72

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSVSALVCLAPGSEETEAVTTIDILVRAGINVTTASVAGDGALEIICSRGVRLLADTRLV
CCCCEEEEECCCCCCCHHHHHEEHHHHCCCCEEEEEECCCCHHEEHHHCCCEEEECCEEE
DVADQKFDVIVLPGGIKGAECFRDSPLLVATVRQTHNEGRLVAAICAAPALVLEHHQLFP
EECCCCEEEEEECCCCCHHHHHCCCCEEEEEEECCCCCCCEEEEHHHCHHHHHHCCCEEE
VGNMTGFPSLKDKIAPNKWMDQRVVYDRRVNLVTSQGPGTSIDFALKIVFLLLGREKAEE
CCCCCCCCCCHHHCCCCCHHHHHHHEECEEEEEECCCCCCCHHHHHHHHHHHHCCCHHHH
IAWQLVLPPGIYNYRE
EEEEEEECCCCCCCCC
>Mature Secondary Structure 
SVSALVCLAPGSEETEAVTTIDILVRAGINVTTASVAGDGALEIICSRGVRLLADTRLV
CCCEEEEECCCCCCCHHHHHEEHHHHCCCCEEEEEECCCCHHEEHHHCCCEEEECCEEE
DVADQKFDVIVLPGGIKGAECFRDSPLLVATVRQTHNEGRLVAAICAAPALVLEHHQLFP
EECCCCEEEEEECCCCCHHHHHCCCCEEEEEEECCCCCCCEEEEHHHCHHHHHHCCCEEE
VGNMTGFPSLKDKIAPNKWMDQRVVYDRRVNLVTSQGPGTSIDFALKIVFLLLGREKAEE
CCCCCCCCCCHHHCCCCCHHHHHHHEECEEEEEECCCCCCCHHHHHHHHHHHHCCCHHHH
IAWQLVLPPGIYNYRE
EEEEEEECCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503; 9592144 [H]