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The map label for this gene is ybeX [C]

Identifier: 108800420

GI number: 108800420

Start: 3664503

End: 3665813

Strand: Reverse

Name: ybeX [C]

Synonym: Mmcs_3454

Alternate gene names: 108800420

Gene position: 3665813-3664503 (Counterclockwise)

Preceding gene: 108800421

Following gene: 108800419

Centisome position: 64.25

GC content: 68.57

Gene sequence:

>1311_bases
ATGAGCGGACTTCCCCAACTCATCGGAGTGATCGCGCTCGTCGCGTTCGGTGGGCTGTTCGCGGCTATCGACGCCGCGCT
GAGCACGGTGTCCATGGCCCGGGTCGAGGAACTCGTACGCGAGGAACGGCCGGGAGCCGTGCGGTTGCAGCGGGTGATGC
ACGAACGGCCCCGCTACATCAACCTCATCGTGCTGCTGCGGATCGCCTGCGAGGTGACCGCGACTGTGCTGCTCGCCGCC
TACCTGGACGGCCACCTCGGCGTGAGCTGGGGACTGACCGCGGCCGCGGCCATCATGGTGGTCGCCAGCTTCGTCGCCGT
CGGCGTCGGGCCGCGCACCGTCGGGCGCCAGAACGCCTATCCCATCGCGCTGTACACCGCGCTTCCGCTGCAGGCCATCT
CGGTGCTGCTCACCCCGATCAGCCGCCTGCTGGTGTTGATCGGCAACGCGCTGACCCCCGGCCGCGGATTCCGCAACGGG
CCGTTCGCCTCGGAGATCGAACTGCGTGAGGTCGTCGACCTGGCGCAGCAGCGCGGCGTGGTGGCCGACGACGAGCGCCG
GATGATCCAGTCGGTGTTCGAACTCGGCGACACCGCGGCCCGCGAGGTGATGGTGCCGCGCACCGAGATGGTGTGGATCG
AAAGTGACAAGACAGCCGGCCAGGCCACCTCACTCGCGGTCCGCAGCGGACACTCCCGCATCCCCGTCATCGGGGAGAAC
GTCGACGACGTGGTCGGCGTGGTGTACCTGAAAGACCTCGTCCAGCAGACGTATTACTCGGTCAACGGCGGCCGCGACAC
CACCGTCGCGCAGGTCATGCGCGATCCGGTGTTCGTGCCGGACTCCAAACCGCTCGACGAACTGCTGCGTGAGATGCAGC
GCGACCGCTACCACATGGCGCTGCTGGTCGACGAGTACGGCGCCATCGCCGGGCTGGTCACCATCGAGGACGTCCTCGAG
GAGATCGTGGGTGAGATCGCCGACGAGTACGACACCGACGAGGTGGCGCCGGTCGAAGAACTCGGCAACCGGGAGTACCG
GGTGTCCGCGCGGCTGCCCATCGAGGACCTCGGCGAGCTCTACGACATCGAGTTCGGTGAGGATCTCGACGTCGACACCG
TCGGCGGTCTGGTCGCCTTCGAACTCGGGCGCGTACCGCTGCCCGGCGCCGAGATCACCTGGGACGGCCTGCGGCTCAAG
GCCGAAGGCGGCCCCGACCATCGCGGCCGGGTGCGCATCGGCACCGTCCTGGTCAGCCCCACCGAGCCAGAGCACGACGA
CGAGACCGAACCCGAGGAGCGCGGTGACTGA

Upstream 100 bases:

>100_bases
TGCTCGAGGAGTGGGTGGCCCATCAGGTCGAGGCGTATCACCTCGACCGTCAGACCGAGCGAGACCGGCGGCTGCTCGAC
AAGTCCCGGTACTTCGACGA

Downstream 100 bases:

>100_bases
GCTGGACCCCGAGGACGACAAACTCGTCGTACTGGCGCGCGGCGCGATGGCGCGGGCCGAGGCGGCCGGCGGCGCCGCCG
TGCGCGACCTCGACGGCCGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 436; Mature: 435

Protein sequence:

>436_residues
MSGLPQLIGVIALVAFGGLFAAIDAALSTVSMARVEELVREERPGAVRLQRVMHERPRYINLIVLLRIACEVTATVLLAA
YLDGHLGVSWGLTAAAAIMVVASFVAVGVGPRTVGRQNAYPIALYTALPLQAISVLLTPISRLLVLIGNALTPGRGFRNG
PFASEIELREVVDLAQQRGVVADDERRMIQSVFELGDTAAREVMVPRTEMVWIESDKTAGQATSLAVRSGHSRIPVIGEN
VDDVVGVVYLKDLVQQTYYSVNGGRDTTVAQVMRDPVFVPDSKPLDELLREMQRDRYHMALLVDEYGAIAGLVTIEDVLE
EIVGEIADEYDTDEVAPVEELGNREYRVSARLPIEDLGELYDIEFGEDLDVDTVGGLVAFELGRVPLPGAEITWDGLRLK
AEGGPDHRGRVRIGTVLVSPTEPEHDDETEPEERGD

Sequences:

>Translated_436_residues
MSGLPQLIGVIALVAFGGLFAAIDAALSTVSMARVEELVREERPGAVRLQRVMHERPRYINLIVLLRIACEVTATVLLAA
YLDGHLGVSWGLTAAAAIMVVASFVAVGVGPRTVGRQNAYPIALYTALPLQAISVLLTPISRLLVLIGNALTPGRGFRNG
PFASEIELREVVDLAQQRGVVADDERRMIQSVFELGDTAAREVMVPRTEMVWIESDKTAGQATSLAVRSGHSRIPVIGEN
VDDVVGVVYLKDLVQQTYYSVNGGRDTTVAQVMRDPVFVPDSKPLDELLREMQRDRYHMALLVDEYGAIAGLVTIEDVLE
EIVGEIADEYDTDEVAPVEELGNREYRVSARLPIEDLGELYDIEFGEDLDVDTVGGLVAFELGRVPLPGAEITWDGLRLK
AEGGPDHRGRVRIGTVLVSPTEPEHDDETEPEERGD
>Mature_435_residues
SGLPQLIGVIALVAFGGLFAAIDAALSTVSMARVEELVREERPGAVRLQRVMHERPRYINLIVLLRIACEVTATVLLAAY
LDGHLGVSWGLTAAAAIMVVASFVAVGVGPRTVGRQNAYPIALYTALPLQAISVLLTPISRLLVLIGNALTPGRGFRNGP
FASEIELREVVDLAQQRGVVADDERRMIQSVFELGDTAAREVMVPRTEMVWIESDKTAGQATSLAVRSGHSRIPVIGENV
DDVVGVVYLKDLVQQTYYSVNGGRDTTVAQVMRDPVFVPDSKPLDELLREMQRDRYHMALLVDEYGAIAGLVTIEDVLEE
IVGEIADEYDTDEVAPVEELGNREYRVSARLPIEDLGELYDIEFGEDLDVDTVGGLVAFELGRVPLPGAEITWDGLRLKA
EGGPDHRGRVRIGTVLVSPTEPEHDDETEPEERGD

Specific function: Unknown

COG id: COG1253

COG function: function code R; Hemolysins and related proteins containing CBS domains

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 CBS domains [H]

Homologues:

Organism=Homo sapiens, GI310128564, Length=395, Percent_Identity=26.5822784810127, Blast_Score=146, Evalue=4e-35,
Organism=Homo sapiens, GI94681046, Length=286, Percent_Identity=28.6713286713287, Blast_Score=70, Evalue=3e-12,
Organism=Escherichia coli, GI1786879, Length=224, Percent_Identity=37.5, Blast_Score=150, Evalue=2e-37,
Organism=Escherichia coli, GI145693175, Length=388, Percent_Identity=24.4845360824742, Blast_Score=109, Evalue=4e-25,
Organism=Escherichia coli, GI87082033, Length=240, Percent_Identity=28.75, Blast_Score=108, Evalue=6e-25,
Organism=Escherichia coli, GI1790664, Length=454, Percent_Identity=19.8237885462555, Blast_Score=102, Evalue=5e-23,
Organism=Escherichia coli, GI1788119, Length=251, Percent_Identity=27.8884462151394, Blast_Score=89, Evalue=8e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016169
- InterPro:   IPR000644
- InterPro:   IPR002550
- InterPro:   IPR005170 [H]

Pfam domain/function: PF00571 CBS; PF03471 CorC_HlyC; PF01595 DUF21 [H]

EC number: NA

Molecular weight: Translated: 47512; Mature: 47381

Theoretical pI: Translated: 4.28; Mature: 4.28

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSGLPQLIGVIALVAFGGLFAAIDAALSTVSMARVEELVREERPGAVRLQRVMHERPRYI
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCHH
NLIVLLRIACEVTATVLLAAYLDGHLGVSWGLTAAAAIMVVASFVAVGVGPRTVGRQNAY
HHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
PIALYTALPLQAISVLLTPISRLLVLIGNALTPGRGFRNGPFASEIELREVVDLAQQRGV
CEEEEHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCC
VADDERRMIQSVFELGDTAAREVMVPRTEMVWIESDKTAGQATSLAVRSGHSRIPVIGEN
CCCHHHHHHHHHHHHCCHHHHHEECCCCEEEEEECCCCCCHHHHHHHHCCCCCCCEECCC
VDDVVGVVYLKDLVQQTYYSVNGGRDTTVAQVMRDPVFVPDSKPLDELLREMQRDRYHMA
HHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHCHHEEE
LLVDEYGAIAGLVTIEDVLEEIVGEIADEYDTDEVAPVEELGNREYRVSARLPIEDLGEL
EEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHCCCEEEEEECCCHHHHHHH
YDIEFGEDLDVDTVGGLVAFELGRVPLPGAEITWDGLRLKAEGGPDHRGRVRIGTVLVSP
HCCCCCCCCCCHHHCCHHHHHHCCCCCCCCCEEECCEEEEECCCCCCCCEEEEEEEEECC
TEPEHDDETEPEERGD
CCCCCCCCCCCHHCCC
>Mature Secondary Structure 
SGLPQLIGVIALVAFGGLFAAIDAALSTVSMARVEELVREERPGAVRLQRVMHERPRYI
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCHH
NLIVLLRIACEVTATVLLAAYLDGHLGVSWGLTAAAAIMVVASFVAVGVGPRTVGRQNAY
HHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
PIALYTALPLQAISVLLTPISRLLVLIGNALTPGRGFRNGPFASEIELREVVDLAQQRGV
CEEEEHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCC
VADDERRMIQSVFELGDTAAREVMVPRTEMVWIESDKTAGQATSLAVRSGHSRIPVIGEN
CCCHHHHHHHHHHHHCCHHHHHEECCCCEEEEEECCCCCCHHHHHHHHCCCCCCCEECCC
VDDVVGVVYLKDLVQQTYYSVNGGRDTTVAQVMRDPVFVPDSKPLDELLREMQRDRYHMA
HHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHCHHEEE
LLVDEYGAIAGLVTIEDVLEEIVGEIADEYDTDEVAPVEELGNREYRVSARLPIEDLGEL
EEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHCCCEEEEEECCCHHHHHHH
YDIEFGEDLDVDTVGGLVAFELGRVPLPGAEITWDGLRLKAEGGPDHRGRVRIGTVLVSP
HCCCCCCCCCCHHHCCHHHHHHCCCCCCCCCEEECCEEEEECCCCCCCCEEEEEEEEECC
TEPEHDDETEPEERGD
CCCCCCCCCCCHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]