Definition | Mycobacterium sp. MCS chromosome, complete genome. |
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Accession | NC_008146 |
Length | 5,705,448 |
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The map label for this gene is 108797954
Identifier: 108797954
GI number: 108797954
Start: 1088106
End: 1088600
Strand: Direct
Name: 108797954
Synonym: Mmcs_0981
Alternate gene names: NA
Gene position: 1088106-1088600 (Clockwise)
Preceding gene: 108797951
Following gene: 108797955
Centisome position: 19.07
GC content: 70.91
Gene sequence:
>495_bases GTGGTGGTGACCGCCGCCGGTTGCGCGCACTCGGTCACCGGCACCGCGATGCCCGCCCAGTCCGACGCCGTCCCGGACCC CGACCGCGACTACGGATACGTCGACAACCGCTGCGGCCTGCTCGAGGACTCCACCGTCTCGGAGACCCTCGACGCCGACG AGGTGGTCCGCCCCTACAGCGGTGCGGTGTGTCAGTACGTCCTCATGCGCGGCGAGGTCATGGTCGACGTCACCTTCTCG TGGTTCGACACCGGCAACCTCGAGCGGGAACGCACGCTGGCCGCCGAGCGGGGAGCGCAGGTGAGCGACACCGTCATCGA GCGGCATCCCGCCTTCCTGGCGCGCCGGTCGACGACCGGGGTGGCGTGCTCGGCGACCGCGGCGGCCGGATCCGGGGTGC TCAGCTGGTGGGTGCAGTACCGCGGGCAGAAGTCCGGTGACCCGTGCGTGGATGCGGAGAAGCTGTTGTCGGCGACCCTC TCGTCGGATCTGTGA
Upstream 100 bases:
>100_bases CGTGCGCACCGGTCGCTGAACCCCTCGGTGCTCGGTACCGTTGGCGGCAATGCGTCGGCGTGTCAGCGTTGTTGCGGGTT GTGCCGCTGCGGCGGTCACC
Downstream 100 bases:
>100_bases GGTGCCCGTGAAAAGGATCCTCCTCGGATGCCTGGCGGCGCTGCTGCTGGCCGGCTGCGGCGGCGCCGACGAACAGCAGG CCGCCCCGGCAGCGGACCCG
Product: hypothetical protein
Products: NA
Alternate protein names: Lipoprotein
Number of amino acids: Translated: 164; Mature: 164
Protein sequence:
>164_residues MVVTAAGCAHSVTGTAMPAQSDAVPDPDRDYGYVDNRCGLLEDSTVSETLDADEVVRPYSGAVCQYVLMRGEVMVDVTFS WFDTGNLERERTLAAERGAQVSDTVIERHPAFLARRSTTGVACSATAAAGSGVLSWWVQYRGQKSGDPCVDAEKLLSATL SSDL
Sequences:
>Translated_164_residues MVVTAAGCAHSVTGTAMPAQSDAVPDPDRDYGYVDNRCGLLEDSTVSETLDADEVVRPYSGAVCQYVLMRGEVMVDVTFS WFDTGNLERERTLAAERGAQVSDTVIERHPAFLARRSTTGVACSATAAAGSGVLSWWVQYRGQKSGDPCVDAEKLLSATL SSDL >Mature_164_residues MVVTAAGCAHSVTGTAMPAQSDAVPDPDRDYGYVDNRCGLLEDSTVSETLDADEVVRPYSGAVCQYVLMRGEVMVDVTFS WFDTGNLERERTLAAERGAQVSDTVIERHPAFLARRSTTGVACSATAAAGSGVLSWWVQYRGQKSGDPCVDAEKLLSATL SSDL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17487; Mature: 17487
Theoretical pI: Translated: 4.27; Mature: 4.27
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.0 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 5.5 %Cys+Met (Translated Protein) 3.0 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 5.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVVTAAGCAHSVTGTAMPAQSDAVPDPDRDYGYVDNRCGLLEDSTVSETLDADEVVRPYS CEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCHHHHHCCCC GAVCQYVLMRGEVMVDVTFSWFDTGNLERERTLAAERGAQVSDTVIERHPAFLARRSTTG HHHHHHHHHCCCEEEEEEEEEECCCCCCHHHHHHHHCCCCHHHHHHHHCHHHHHHCCCCC VACSATAAAGSGVLSWWVQYRGQKSGDPCVDAEKLLSATLSSDL EEEECCHHCCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCC >Mature Secondary Structure MVVTAAGCAHSVTGTAMPAQSDAVPDPDRDYGYVDNRCGLLEDSTVSETLDADEVVRPYS CEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCHHHHHCCCC GAVCQYVLMRGEVMVDVTFSWFDTGNLERERTLAAERGAQVSDTVIERHPAFLARRSTTG HHHHHHHHHCCCEEEEEEEEEECCCCCCHHHHHHHHCCCCHHHHHHHHCHHHHHHCCCCC VACSATAAAGSGVLSWWVQYRGQKSGDPCVDAEKLLSATLSSDL EEEECCHHCCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA