| Definition | Mycobacterium sp. MCS chromosome, complete genome. |
|---|---|
| Accession | NC_008146 |
| Length | 5,705,448 |
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The map label for this gene is 108797873
Identifier: 108797873
GI number: 108797873
Start: 993915
End: 994850
Strand: Reverse
Name: 108797873
Synonym: Mmcs_0898
Alternate gene names: NA
Gene position: 994850-993915 (Counterclockwise)
Preceding gene: 108797874
Following gene: 108797872
Centisome position: 17.44
GC content: 68.27
Gene sequence:
>936_bases ATGGGCCACACTGGACAGGTGACGGAACCGGGAGCCACACGCGTCGCGGTCTACCTCGACTTCGACAACATCGTGATTTC GCGGTACGACCAGGTCCACGGGCGCAGTTCGTACCAGAAGGACAAGACCAAGGACCCCGACGACTTCGCGGACAAACTGC AGCGCGCCACCGTCGACATCGGCGCGGTGATCGACTTCGCGTCTTCGTTCGGCACGCTGGTGCTCACCCGCGCCTATGCG GACTGGTCCTCGGACGTCAACGCGAACTACCGCGGACAGCTCGTGGCCCGAGCCGTCGACCTGGTGCAGCTGTTCCCGGC CGCCGCATACGGCAAGAACGGCGCCGACATCCGGCTGGCCGTCGACGCGGTCGAGGACATGTTCCGGCTACCCGACCTGA CCCACGTGGTGATCGTCGGCGGGGATTCGGACTACATCGCGCTGGCGCAGCGCTGCAAACGGCTCGGCCGCTACGTGGTC GGCATCGGGGTGGCCGGTGCGTCGAGCCGGTCGCTGGCCGCCGCCTGCGACGAGTTCGTCACCTACGACGCGCTGCCCGG GGTCCCGGTCCCGCCGCCCGCGGAGCCGGCCGACAGCGACAAGGCCGAGCCCGCCAAGCGCACCCGGCGCCGCAAGCCGG ACAAGTCCGAAGAGCCCGACCACGAACCCGACGCCGAACCGGAGCCCGATCCCGGGGATTCCGCGACGGCGCTGCTGATG CGGGCGTTGCGGATCGGCCTGGAGAAGGACGACGCCGACTGGTTGCACAACTCCGCGGTCAAGGCGCAGATGAAGCGGAT GGATCCGTCGTTCAACGAGAAATCGCTCGGCTACCGGTCGTTCAGCGATTTCCTGCGCTCGCACGCCGATCTGGTCGAAC TCGACGAGAGCTCGACCACCCGCTTGGTGCGCCTGCGGCTCCCCGCCGACTCATGA
Upstream 100 bases:
>100_bases GTCGAATGGACGCTGGTCGCCAACCCGACGGTGCGCCGCGTCCTCGGCATCTGCGATCCGCACCTCACATTGCCGCAGGC TGCCTGATTCCGGGCGGCCC
Downstream 100 bases:
>100_bases GCGTCGGCGCCCTCGCCGTCACCGGGTTGCTGCGCGCCTTCACCGACGCGGAGGTGTTCGAACCCGCCGATGTGCACGTC GCGCGCCGGCTCACCGACAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 311; Mature: 310
Protein sequence:
>311_residues MGHTGQVTEPGATRVAVYLDFDNIVISRYDQVHGRSSYQKDKTKDPDDFADKLQRATVDIGAVIDFASSFGTLVLTRAYA DWSSDVNANYRGQLVARAVDLVQLFPAAAYGKNGADIRLAVDAVEDMFRLPDLTHVVIVGGDSDYIALAQRCKRLGRYVV GIGVAGASSRSLAAACDEFVTYDALPGVPVPPPAEPADSDKAEPAKRTRRRKPDKSEEPDHEPDAEPEPDPGDSATALLM RALRIGLEKDDADWLHNSAVKAQMKRMDPSFNEKSLGYRSFSDFLRSHADLVELDESSTTRLVRLRLPADS
Sequences:
>Translated_311_residues MGHTGQVTEPGATRVAVYLDFDNIVISRYDQVHGRSSYQKDKTKDPDDFADKLQRATVDIGAVIDFASSFGTLVLTRAYA DWSSDVNANYRGQLVARAVDLVQLFPAAAYGKNGADIRLAVDAVEDMFRLPDLTHVVIVGGDSDYIALAQRCKRLGRYVV GIGVAGASSRSLAAACDEFVTYDALPGVPVPPPAEPADSDKAEPAKRTRRRKPDKSEEPDHEPDAEPEPDPGDSATALLM RALRIGLEKDDADWLHNSAVKAQMKRMDPSFNEKSLGYRSFSDFLRSHADLVELDESSTTRLVRLRLPADS >Mature_310_residues GHTGQVTEPGATRVAVYLDFDNIVISRYDQVHGRSSYQKDKTKDPDDFADKLQRATVDIGAVIDFASSFGTLVLTRAYAD WSSDVNANYRGQLVARAVDLVQLFPAAAYGKNGADIRLAVDAVEDMFRLPDLTHVVIVGGDSDYIALAQRCKRLGRYVVG IGVAGASSRSLAAACDEFVTYDALPGVPVPPPAEPADSDKAEPAKRTRRRKPDKSEEPDHEPDAEPEPDPGDSATALLMR ALRIGLEKDDADWLHNSAVKAQMKRMDPSFNEKSLGYRSFSDFLRSHADLVELDESSTTRLVRLRLPADS
Specific function: Unknown
COG id: COG1432
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 34024; Mature: 33893
Theoretical pI: Translated: 4.91; Mature: 4.91
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGHTGQVTEPGATRVAVYLDFDNIVISRYDQVHGRSSYQKDKTKDPDDFADKLQRATVDI CCCCCCCCCCCCCEEEEEEECCCHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHH GAVIDFASSFGTLVLTRAYADWSSDVNANYRGQLVARAVDLVQLFPAAAYGKNGADIRLA HHHHHHHHHHHHEEHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEEE VDAVEDMFRLPDLTHVVIVGGDSDYIALAQRCKRLGRYVVGIGVAGASSRSLAAACDEFV HHHHHHHHHCCCCEEEEEEECCCCHHHHHHHHHHHCCEEEEEEECCCCCCHHHHHHHHHH TYDALPGVPVPPPAEPADSDKAEPAKRTRRRKPDKSEEPDHEPDAEPEPDPGDSATALLM HHCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHH RALRIGLEKDDADWLHNSAVKAQMKRMDPSFNEKSLGYRSFSDFLRSHADLVELDESSTT HHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCCHHCCHHHHHHHHHCCCCEEECCCCCCE RLVRLRLPADS EEEEEECCCCC >Mature Secondary Structure GHTGQVTEPGATRVAVYLDFDNIVISRYDQVHGRSSYQKDKTKDPDDFADKLQRATVDI CCCCCCCCCCCCEEEEEEECCCHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHH GAVIDFASSFGTLVLTRAYADWSSDVNANYRGQLVARAVDLVQLFPAAAYGKNGADIRLA HHHHHHHHHHHHEEHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEEE VDAVEDMFRLPDLTHVVIVGGDSDYIALAQRCKRLGRYVVGIGVAGASSRSLAAACDEFV HHHHHHHHHCCCCEEEEEEECCCCHHHHHHHHHHHCCEEEEEEECCCCCCHHHHHHHHHH TYDALPGVPVPPPAEPADSDKAEPAKRTRRRKPDKSEEPDHEPDAEPEPDPGDSATALLM HHCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHH RALRIGLEKDDADWLHNSAVKAQMKRMDPSFNEKSLGYRSFSDFLRSHADLVELDESSTT HHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCCHHCCHHHHHHHHHCCCCEEECCCCCCE RLVRLRLPADS EEEEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA