| Definition | Mycobacterium sp. MCS chromosome, complete genome. |
|---|---|
| Accession | NC_008146 |
| Length | 5,705,448 |
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The map label for this gene is 108797794
Identifier: 108797794
GI number: 108797794
Start: 902871
End: 903719
Strand: Reverse
Name: 108797794
Synonym: Mmcs_0816
Alternate gene names: NA
Gene position: 903719-902871 (Counterclockwise)
Preceding gene: 108797795
Following gene: 108797788
Centisome position: 15.84
GC content: 57.95
Gene sequence:
>849_bases GTGAGAGGTCCATCCATCATCGAGCGCACCATGTCCATTTCCTACTCGATAGGGATCGACGGTCGCGCATGGCAGTATCA CTCACGTAGTGATAGGCACTCGAAAACAGCGTGCTGGGCAATAGCTTTCGATCTGCTCAATACGTCAAGTCTGTTGAGGC AACATGTCGCTGATGGCAAGGTGTCCTTCGCCATCAACCGTAAGATGAACAACTGGCAGACGGGGCGATCCAAGAATCTG GACCTCGTCATCGCTCGCGCCTCCGGCGGAAGCGGAGAGACTGCATCTGTCGGCCTGGAGGAACTCGCTGTACGCTATGC GATACGTCTGAGCGACGCGGAGCGAGCGCTCCTCCGTAGTTTGCCTTCCAGCTCCACTGGCGCCGCTGGTTCGACGGTGC TGGTCGCGCTCGAAGCCAAGGCCTGTATGACCGCGCACATGAAGGCGCGCCCGCGACTGTTCGACGAACTCGACGCGAGC CACTCGACTGTCCACGGCGACAACAACAATGCACTTGCTGTCGGCTTCGCGATGGTGAATCACGCCGAGCGATTCGTCAG CCCGGTCAACCAGTCAGGCTCTGAAGTTCACTACAACCGGCACAAGCAACCAGCCGACACACTGAAGGTCATCGAAAAGC TCCGAGAGATCAACCGTCGGCCCGGCCCACAGACAGGTCAGTCCGGCTTCGACGCGTTCGGCATCATGGTTGTCGAATTG GAGAATGACAGCTCACCAATGCACATTGTCACCGGACCGCCTGCACCTCAACCGGATAACGACTTCCACTACGAAAAGAT GATCATGCGAACCGCGCACTTGTACGATTCCAGCTTTGCGGCGGTGTAG
Upstream 100 bases:
>100_bases TCCTCCGACGAGCCAGATCAGGATCGCTGCGCTTCGTTCCAGGATTCCTTGAGGATGTGGAAGCGCACCTGGCGCGTATG TCGGGAACACAGGAAGTAGC
Downstream 100 bases:
>100_bases CCGCCTGGGAGCGTTCTCCAGCGGCGCCAAAGCCGGATTCCTCCGTCAACTGCTCTTACCAGACCAGATCGATAAGGACC CCTTGCTTGTAGAGGTTCTG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 282; Mature: 282
Protein sequence:
>282_residues MRGPSIIERTMSISYSIGIDGRAWQYHSRSDRHSKTACWAIAFDLLNTSSLLRQHVADGKVSFAINRKMNNWQTGRSKNL DLVIARASGGSGETASVGLEELAVRYAIRLSDAERALLRSLPSSSTGAAGSTVLVALEAKACMTAHMKARPRLFDELDAS HSTVHGDNNNALAVGFAMVNHAERFVSPVNQSGSEVHYNRHKQPADTLKVIEKLREINRRPGPQTGQSGFDAFGIMVVEL ENDSSPMHIVTGPPAPQPDNDFHYEKMIMRTAHLYDSSFAAV
Sequences:
>Translated_282_residues MRGPSIIERTMSISYSIGIDGRAWQYHSRSDRHSKTACWAIAFDLLNTSSLLRQHVADGKVSFAINRKMNNWQTGRSKNL DLVIARASGGSGETASVGLEELAVRYAIRLSDAERALLRSLPSSSTGAAGSTVLVALEAKACMTAHMKARPRLFDELDAS HSTVHGDNNNALAVGFAMVNHAERFVSPVNQSGSEVHYNRHKQPADTLKVIEKLREINRRPGPQTGQSGFDAFGIMVVEL ENDSSPMHIVTGPPAPQPDNDFHYEKMIMRTAHLYDSSFAAV >Mature_282_residues MRGPSIIERTMSISYSIGIDGRAWQYHSRSDRHSKTACWAIAFDLLNTSSLLRQHVADGKVSFAINRKMNNWQTGRSKNL DLVIARASGGSGETASVGLEELAVRYAIRLSDAERALLRSLPSSSTGAAGSTVLVALEAKACMTAHMKARPRLFDELDAS HSTVHGDNNNALAVGFAMVNHAERFVSPVNQSGSEVHYNRHKQPADTLKVIEKLREINRRPGPQTGQSGFDAFGIMVVEL ENDSSPMHIVTGPPAPQPDNDFHYEKMIMRTAHLYDSSFAAV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30887; Mature: 30887
Theoretical pI: Translated: 8.69; Mature: 8.69
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRGPSIIERTMSISYSIGIDGRAWQYHSRSDRHSKTACWAIAFDLLNTSSLLRQHVADGK CCCHHHHHHHHEEEEEECCCCCEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCE VSFAINRKMNNWQTGRSKNLDLVIARASGGSGETASVGLEELAVRYAIRLSDAERALLRS EEEEEECCCCCCCCCCCCCCEEEEEECCCCCCCHHHHCHHHHHHHHHEEECHHHHHHHHH LPSSSTGAAGSTVLVALEAKACMTAHMKARPRLFDELDASHSTVHGDNNNALAVGFAMVN CCCCCCCCCCCEEEEEEEHHHHHHHHHHCCCHHHHHHCCCCCEEECCCCCEEEEHHHHHH HAERFVSPVNQSGSEVHYNRHKQPADTLKVIEKLREINRRPGPQTGQSGFDAFGIMVVEL HHHHHHHHCCCCCCEECCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEEEE ENDSSPMHIVTGPPAPQPDNDFHYEKMIMRTAHLYDSSFAAV ECCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure MRGPSIIERTMSISYSIGIDGRAWQYHSRSDRHSKTACWAIAFDLLNTSSLLRQHVADGK CCCHHHHHHHHEEEEEECCCCCEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCE VSFAINRKMNNWQTGRSKNLDLVIARASGGSGETASVGLEELAVRYAIRLSDAERALLRS EEEEEECCCCCCCCCCCCCCEEEEEECCCCCCCHHHHCHHHHHHHHHEEECHHHHHHHHH LPSSSTGAAGSTVLVALEAKACMTAHMKARPRLFDELDASHSTVHGDNNNALAVGFAMVN CCCCCCCCCCCEEEEEEEHHHHHHHHHHCCCHHHHHHCCCCCEEECCCCCEEEEHHHHHH HAERFVSPVNQSGSEVHYNRHKQPADTLKVIEKLREINRRPGPQTGQSGFDAFGIMVVEL HHHHHHHHCCCCCCEECCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEEEE ENDSSPMHIVTGPPAPQPDNDFHYEKMIMRTAHLYDSSFAAV ECCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA