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The map label for this gene is dedA [H]

Identifier: 108797745

GI number: 108797745

Start: 820195

End: 820797

Strand: Reverse

Name: dedA [H]

Synonym: Mmcs_0766

Alternate gene names: 108797745

Gene position: 820797-820195 (Counterclockwise)

Preceding gene: 108797746

Following gene: 108797744

Centisome position: 14.39

GC content: 67.83

Gene sequence:

>603_bases
ATGGACTCCCTGCTCGGCGCGCTCGGGCATGCGTGGTGGGCCTATCCGCTCCTTCTCGCCTTCTGCACATTCGACGCCGT
CGTACCCGTCATCCCGAGCGAGACCGGTCTGATCACGGGCGGAATCCTCTCCGCGGACGGCGCGATGTCACTGCCCCTGG
TGATCGCCATGGCCTCGATCGGATCGTTCGTCGGTGACAACCTGGCGTACTGGATCGGAAGGTCGGCCGAGGACCGGGCC
TGCCGGTGGATCACCCGTGGAGAGAAGGGGCGTCGAGGTCTGGACTGGGCGCGGCGGGAACTCGACGAGCACGGCGGATC
GATCATCATCGTGGCGCGGTTCATCCCCGGTGGTCGGACGCCGACGATGATCGCCTGCGGGATACTCGAATTCCCGTACC
GCCGGTTCCTCGCCTTCGACGCCGTCGCCGCCGTTCTCTGGGGAAGTATCAACACGCTGATCGGCTTCATCGGAGGGAAG
GCGTTCGCCGAGAACACGATCGGCGCGTTCGCGGTGTCATTCGGGGTGGCGGTCGCCGTGGGCGGCGCCGTCGAGGTGGT
GCGCAGGATGCGCCGCAAGCCCGAGCCCGCCGGGCAGCGCTAG

Upstream 100 bases:

>100_bases
CTCAACGCACCACGCCCGCCCGGGTTCCGGGCGGACTCGTCGTAGCCCCGGGCGGCCGCGGTGTTTCGGTTGCGGGCGAC
CCGGGCACCGAAGGAGGGTG

Downstream 100 bases:

>100_bases
GCATGGCGCGGTCATCGCGTGGGATGGTGGTGGTATGGACCTGATGCCGGCGGCGTTCATCGGACACGGCAGCCCCATGA
ACGCGCTCGAAGTCAACCGC

Product: hypothetical protein

Products: NA

Alternate protein names: Protein DSG-1 [H]

Number of amino acids: Translated: 200; Mature: 200

Protein sequence:

>200_residues
MDSLLGALGHAWWAYPLLLAFCTFDAVVPVIPSETGLITGGILSADGAMSLPLVIAMASIGSFVGDNLAYWIGRSAEDRA
CRWITRGEKGRRGLDWARRELDEHGGSIIIVARFIPGGRTPTMIACGILEFPYRRFLAFDAVAAVLWGSINTLIGFIGGK
AFAENTIGAFAVSFGVAVAVGGAVEVVRRMRRKPEPAGQR

Sequences:

>Translated_200_residues
MDSLLGALGHAWWAYPLLLAFCTFDAVVPVIPSETGLITGGILSADGAMSLPLVIAMASIGSFVGDNLAYWIGRSAEDRA
CRWITRGEKGRRGLDWARRELDEHGGSIIIVARFIPGGRTPTMIACGILEFPYRRFLAFDAVAAVLWGSINTLIGFIGGK
AFAENTIGAFAVSFGVAVAVGGAVEVVRRMRRKPEPAGQR
>Mature_200_residues
MDSLLGALGHAWWAYPLLLAFCTFDAVVPVIPSETGLITGGILSADGAMSLPLVIAMASIGSFVGDNLAYWIGRSAEDRA
CRWITRGEKGRRGLDWARRELDEHGGSIIIVARFIPGGRTPTMIACGILEFPYRRFLAFDAVAAVLWGSINTLIGFIGGK
AFAENTIGAFAVSFGVAVAVGGAVEVVRRMRRKPEPAGQR

Specific function: Unknown

COG id: COG0586

COG function: function code S; Uncharacterized membrane-associated protein

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the dedA family [H]

Homologues:

Organism=Escherichia coli, GI1788656, Length=183, Percent_Identity=27.8688524590164, Blast_Score=75, Evalue=4e-15,
Organism=Escherichia coli, GI87082056, Length=132, Percent_Identity=30.3030303030303, Blast_Score=61, Evalue=5e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR015414 [H]

Pfam domain/function: PF09335 SNARE_assoc [H]

EC number: NA

Molecular weight: Translated: 21367; Mature: 21367

Theoretical pI: Translated: 8.89; Mature: 8.89

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDSLLGALGHAWWAYPLLLAFCTFDAVVPVIPSETGLITGGILSADGAMSLPLVIAMASI
CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEECCEECCCCCHHHHHHHHHHHH
GSFVGDNLAYWIGRSAEDRACRWITRGEKGRRGLDWARRELDEHGGSIIIVARFIPGGRT
HHHHHCCHHHHHCCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCEEEEEEECCCCCC
PTMIACGILEFPYRRFLAFDAVAAVLWGSINTLIGFIGGKAFAENTIGAFAVSFGVAVAV
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH
GGAVEVVRRMRRKPEPAGQR
CHHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure
MDSLLGALGHAWWAYPLLLAFCTFDAVVPVIPSETGLITGGILSADGAMSLPLVIAMASI
CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEECCEECCCCCHHHHHHHHHHHH
GSFVGDNLAYWIGRSAEDRACRWITRGEKGRRGLDWARRELDEHGGSIIIVARFIPGGRT
HHHHHCCHHHHHCCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCEEEEEEECCCCCC
PTMIACGILEFPYRRFLAFDAVAAVLWGSINTLIGFIGGKAFAENTIGAFAVSFGVAVAV
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH
GGAVEVVRRMRRKPEPAGQR
CHHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]