Definition | Mycobacterium sp. MCS chromosome, complete genome. |
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Accession | NC_008146 |
Length | 5,705,448 |
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The map label for this gene is 108797645
Identifier: 108797645
GI number: 108797645
Start: 725326
End: 726297
Strand: Direct
Name: 108797645
Synonym: Mmcs_0665
Alternate gene names: NA
Gene position: 725326-726297 (Clockwise)
Preceding gene: 108797644
Following gene: 108797646
Centisome position: 12.71
GC content: 69.34
Gene sequence:
>972_bases ATGACAGAACCAGATAACAGCTCCAGCACCCGGCCGATCTCGGTCGCCGAGTTGCTCGCGAAGAACGGCACCATCGGCGC GCCCCCGGTCGGTGGCCGGCGTCGGCGCCGCCGTGGCAACGCCGATGCGGTGACCGTCGCCGAGCTGACCGGTGAGATCC CGATCGTCACCGACCGCGCCTCGGACACCCGCGAGGAGCGGGCCGACGAGACCGCGCGGATCCCCGTCAACGGCGCCACC CAAGAGCAGGAGACGGTCACCGAACCCGCGCCGGAGGACGTCGTCGAACCCGAGGTCACCGAGGTGGCCGAATTCGAGAC CGAGGAGCCCGACGACGTCGACGTCGACGAGGACATCCCGCTCGAACAGGACACCGTCGAACAGGACACCGTCGGCGCCG AGGACATGAGCCCCGACCCGCTCCTTGACGACGACGAGGAGCCGGCGGATCTGCTCGACTCTGACCTCGACGAACCGGCG CGCGAACGTTCCCAGACCGACGACGACGAGTTGCCGTCGTATCTGCGTTCGTCGGCCGGGCCGCTGTTCGGCGGCGGCAC CGTCGCCGACGACCTCGCCCGCCGCGGCAAGGACGCCGACACCGCCACGATCGACGAGCACGACGACGAGGACGAACTCG ACGAGCACGACCTCCGCGACGACACGCGCGATGACCTCCGCGATGATGACGTCGAGGCCGGCGGTCGCATGTCGGCGTTC CTGCGCGGCGCCTGGATCGTCGGACAGTGCATCATCGCCGTCGCGTTCGGAGCGGGCCTGTTCATCGCGTTCGACCAGCT GTGGAAGTGGAACAACATCGTCGCGCTCGTGCTGTCGGTGCTGGTGATCCTCGGGCTGGTGGTCGGGGTGCGCGTGGTGC GCAAGACCGAGGACATCGGCAGCACGCTGATCGCGGTGGCAGTGGGCGCACTGGTCACGCTGGGACCGCTGGCGTTGCTC CAGTCCGGCTAG
Upstream 100 bases:
>100_bases CCCGCGTGAGCGGTATGGACGATCTCGCCGCGGTGGAGACGCCGGTGCGGGATGCTGGACCCAAGGCGCTCAGCCCAACT GCCACTAAAGGCAACACACG
Downstream 100 bases:
>100_bases TCACCCTGTGCGCCCCGCGATCAAGGTCGGTCTGTCGACGGCCTCGGTCTATCCGCTGAGGACCGAGGCCGCCTTCGAGT ACGCCGCCCGCCTCGGCTAC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 323; Mature: 322
Protein sequence:
>323_residues MTEPDNSSSTRPISVAELLAKNGTIGAPPVGGRRRRRRGNADAVTVAELTGEIPIVTDRASDTREERADETARIPVNGAT QEQETVTEPAPEDVVEPEVTEVAEFETEEPDDVDVDEDIPLEQDTVEQDTVGAEDMSPDPLLDDDEEPADLLDSDLDEPA RERSQTDDDELPSYLRSSAGPLFGGGTVADDLARRGKDADTATIDEHDDEDELDEHDLRDDTRDDLRDDDVEAGGRMSAF LRGAWIVGQCIIAVAFGAGLFIAFDQLWKWNNIVALVLSVLVILGLVVGVRVVRKTEDIGSTLIAVAVGALVTLGPLALL QSG
Sequences:
>Translated_323_residues MTEPDNSSSTRPISVAELLAKNGTIGAPPVGGRRRRRRGNADAVTVAELTGEIPIVTDRASDTREERADETARIPVNGAT QEQETVTEPAPEDVVEPEVTEVAEFETEEPDDVDVDEDIPLEQDTVEQDTVGAEDMSPDPLLDDDEEPADLLDSDLDEPA RERSQTDDDELPSYLRSSAGPLFGGGTVADDLARRGKDADTATIDEHDDEDELDEHDLRDDTRDDLRDDDVEAGGRMSAF LRGAWIVGQCIIAVAFGAGLFIAFDQLWKWNNIVALVLSVLVILGLVVGVRVVRKTEDIGSTLIAVAVGALVTLGPLALL QSG >Mature_322_residues TEPDNSSSTRPISVAELLAKNGTIGAPPVGGRRRRRRGNADAVTVAELTGEIPIVTDRASDTREERADETARIPVNGATQ EQETVTEPAPEDVVEPEVTEVAEFETEEPDDVDVDEDIPLEQDTVEQDTVGAEDMSPDPLLDDDEEPADLLDSDLDEPAR ERSQTDDDELPSYLRSSAGPLFGGGTVADDLARRGKDADTATIDEHDDEDELDEHDLRDDTRDDLRDDDVEAGGRMSAFL RGAWIVGQCIIAVAFGAGLFIAFDQLWKWNNIVALVLSVLVILGLVVGVRVVRKTEDIGSTLIAVAVGALVTLGPLALLQ SG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: To M.tuberculosis Rv0497 [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 34779; Mature: 34648
Theoretical pI: Translated: 3.77; Mature: 3.77
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 1.2 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 0.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTEPDNSSSTRPISVAELLAKNGTIGAPPVGGRRRRRRGNADAVTVAELTGEIPIVTDRA CCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCHHHHHCCCCCEEEHHHHCCCCCEEECCC SDTREERADETARIPVNGATQEQETVTEPAPEDVVEPEVTEVAEFETEEPDDVDVDEDIP CHHHHHHCCCCEECCCCCCCCHHHHHCCCCCHHHCCCCHHHHHHHCCCCCCCCCCCCCCC LEQDTVEQDTVGAEDMSPDPLLDDDEEPADLLDSDLDEPARERSQTDDDELPSYLRSSAG CCCCCCHHHHCCCCCCCCCCCCCCCCCCHHHHHHHCCHHHHHHCCCCHHHHHHHHHHCCC PLFGGGTVADDLARRGKDADTATIDEHDDEDELDEHDLRDDTRDDLRDDDVEAGGRMSAF CCCCCCHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHCCCCCHHHCCCCCHHCCCHHHHH LRGAWIVGQCIIAVAFGAGLFIAFDQLWKWNNIVALVLSVLVILGLVVGVRVVRKTEDIG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH STLIAVAVGALVTLGPLALLQSG HHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure TEPDNSSSTRPISVAELLAKNGTIGAPPVGGRRRRRRGNADAVTVAELTGEIPIVTDRA CCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCHHHHHCCCCCEEEHHHHCCCCCEEECCC SDTREERADETARIPVNGATQEQETVTEPAPEDVVEPEVTEVAEFETEEPDDVDVDEDIP CHHHHHHCCCCEECCCCCCCCHHHHHCCCCCHHHCCCCHHHHHHHCCCCCCCCCCCCCCC LEQDTVEQDTVGAEDMSPDPLLDDDEEPADLLDSDLDEPARERSQTDDDELPSYLRSSAG CCCCCCHHHHCCCCCCCCCCCCCCCCCCHHHHHHHCCHHHHHHCCCCHHHHHHHHHHCCC PLFGGGTVADDLARRGKDADTATIDEHDDEDELDEHDLRDDTRDDLRDDDVEAGGRMSAF CCCCCCHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHCCCCCHHHCCCCCHHCCCHHHHH LRGAWIVGQCIIAVAFGAGLFIAFDQLWKWNNIVALVLSVLVILGLVVGVRVVRKTEDIG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH STLIAVAVGALVTLGPLALLQSG HHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 11234002 [H]