Definition | Mycobacterium sp. MCS chromosome, complete genome. |
---|---|
Accession | NC_008146 |
Length | 5,705,448 |
Click here to switch to the map view.
The map label for this gene is 108797601
Identifier: 108797601
GI number: 108797601
Start: 682892
End: 684367
Strand: Reverse
Name: 108797601
Synonym: Mmcs_0621
Alternate gene names: NA
Gene position: 684367-682892 (Counterclockwise)
Preceding gene: 108797602
Following gene: 108797599
Centisome position: 11.99
GC content: 69.38
Gene sequence:
>1476_bases ATGTTCGATACGGTGTTTGCGGGGCTGGAGGAGTCCGCGCTTCTTGCTGCGATCGAGCAGTCCGCGCGTGAGGAGGCGCA GGCCGGGGCGCGGAAGTTGGCCGCGATCGCACAGCTGGTGCATCTGACGGTGACCTGCGACGAGGAGTGCGACGGATGGG TGTATGACTCGTGGGCTGCGGCCGCCTCCGAGATCGGGGCGGTGTTGAACATCGGCCACAAGCGGGCGTCGGGGCAGATG CGGATCGCGGTCGCCCTGCGTGACCGGCTGCCCAAGGTCGCGGCGCTGTACCTGCAGGGGCGGTTGAGTGCCCGGTTGAT CTCCGAGATCAGCTGGCGCACCCGCCTGGTCGACGACGAGCAGGTGCTGGGGCTGTTGGATGCGGCGCTGGCCGAGGCGG CGTTGCGGTGGGGGCCGTTGTCGGAGGCGCGGTTGGCCCGGGCCCTCGATGCGGTGATCCACCGGTATGACCGGGATGCG GTGATCCGAGCCAAAGACACCGTCAAGACCCGCGACTTCCATATCGGATCCGTTGATGATCCCGACGAGTTGGTGTTGGT CTGGGGTCAGCTGCTGGGCTGTGACGCCGCAGCGCTGTCGGCGCGGATCGCCGCGTTGCTCAAAGGGATCTGCGACAACG ACCCGCGCAGCGTGGGTGAGCGGCGCTCGTGTGCGGTGGGCGCCATCGTCCAGGGCCACGACCATCTGCCGTGCCGCTGC GGCTCCCCCGCATGCGCGGCAGCAGCGCCGGAGAAGTCGAATGTGGTCATCTCGGTGATCGCCGATCCGGCCGCGGTCGA GGCGGCCCAGAAGCTGATCGCCGCCGAGGACGAACACCACGCCGCGAAGGACGAGCCCGAACCCGTCCCGTGCCCGCAGG ATTCGGGGGTGGCGTTGCTGCCCGGGGTGAAGCTCCTGCCGATCGTGGCGTTGGCCGAGGCGATCCGCGGTGGAGCGGCG ATCAAACCGTTGTGGCTGCCCGGCCCGGATCCCGAACCGCACTACCGGCCCTCGGCCACGCTGGCCGCGTTCGTGCGCGC CCGCGACCTGTTCTGCCGCTTCCCCGGCTGCGACGTGCCCGCCGAGCGCTGCGATATCGACCATGTCGTGCCGTGGCCGT ACGGACCCACCCACGCGTCGAACCTGAACTGCAAATGCCGCACCCACCACCTGGGAAAGACCTTCTGGGACGGCTGGCAT GACGAACAATCACCTGACGGCACGGTGACCTGGACAACGCCGACCGGCAAGCGCCACACCACGGTGCCGGGCAGCCGGCT GTTCTTCCCCGAATGGGACACCACCACCGCCGAGTTACCGCCGCTGGCCCAACCGCCCCCGGACCCCGGGCGCACCGCGA AGATGCCCAAGCGACGACGCACCCGCGCCGCCGACAACGCCGCCCGCGTCAAAGCCGAACGCGAACACAACGCCGCCCAA CGAAATTCGCGCGCGGAGCGACCACCACCGTTCTGA
Upstream 100 bases:
>100_bases CCTGACACATCAACCGTCACCGATGTCCTGATACAGAACGGTCACCGATGTTTTGAGACATCACAGCGGGTTGTCACCCG TCGACGCTACAATCGAACAC
Downstream 100 bases:
>100_bases CGAACGGCTAGCGAGAGCGGCCGTGCGGTGCCCGCAATCCGAGCGCGCGGCGGCCGGCCGCGATCAGCTGATCGCGCAGC TCCGCATCGTCGGCGTCACC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 491; Mature: 491
Protein sequence:
>491_residues MFDTVFAGLEESALLAAIEQSAREEAQAGARKLAAIAQLVHLTVTCDEECDGWVYDSWAAAASEIGAVLNIGHKRASGQM RIAVALRDRLPKVAALYLQGRLSARLISEISWRTRLVDDEQVLGLLDAALAEAALRWGPLSEARLARALDAVIHRYDRDA VIRAKDTVKTRDFHIGSVDDPDELVLVWGQLLGCDAAALSARIAALLKGICDNDPRSVGERRSCAVGAIVQGHDHLPCRC GSPACAAAAPEKSNVVISVIADPAAVEAAQKLIAAEDEHHAAKDEPEPVPCPQDSGVALLPGVKLLPIVALAEAIRGGAA IKPLWLPGPDPEPHYRPSATLAAFVRARDLFCRFPGCDVPAERCDIDHVVPWPYGPTHASNLNCKCRTHHLGKTFWDGWH DEQSPDGTVTWTTPTGKRHTTVPGSRLFFPEWDTTTAELPPLAQPPPDPGRTAKMPKRRRTRAADNAARVKAEREHNAAQ RNSRAERPPPF
Sequences:
>Translated_491_residues MFDTVFAGLEESALLAAIEQSAREEAQAGARKLAAIAQLVHLTVTCDEECDGWVYDSWAAAASEIGAVLNIGHKRASGQM RIAVALRDRLPKVAALYLQGRLSARLISEISWRTRLVDDEQVLGLLDAALAEAALRWGPLSEARLARALDAVIHRYDRDA VIRAKDTVKTRDFHIGSVDDPDELVLVWGQLLGCDAAALSARIAALLKGICDNDPRSVGERRSCAVGAIVQGHDHLPCRC GSPACAAAAPEKSNVVISVIADPAAVEAAQKLIAAEDEHHAAKDEPEPVPCPQDSGVALLPGVKLLPIVALAEAIRGGAA IKPLWLPGPDPEPHYRPSATLAAFVRARDLFCRFPGCDVPAERCDIDHVVPWPYGPTHASNLNCKCRTHHLGKTFWDGWH DEQSPDGTVTWTTPTGKRHTTVPGSRLFFPEWDTTTAELPPLAQPPPDPGRTAKMPKRRRTRAADNAARVKAEREHNAAQ RNSRAERPPPF >Mature_491_residues MFDTVFAGLEESALLAAIEQSAREEAQAGARKLAAIAQLVHLTVTCDEECDGWVYDSWAAAASEIGAVLNIGHKRASGQM RIAVALRDRLPKVAALYLQGRLSARLISEISWRTRLVDDEQVLGLLDAALAEAALRWGPLSEARLARALDAVIHRYDRDA VIRAKDTVKTRDFHIGSVDDPDELVLVWGQLLGCDAAALSARIAALLKGICDNDPRSVGERRSCAVGAIVQGHDHLPCRC GSPACAAAAPEKSNVVISVIADPAAVEAAQKLIAAEDEHHAAKDEPEPVPCPQDSGVALLPGVKLLPIVALAEAIRGGAA IKPLWLPGPDPEPHYRPSATLAAFVRARDLFCRFPGCDVPAERCDIDHVVPWPYGPTHASNLNCKCRTHHLGKTFWDGWH DEQSPDGTVTWTTPTGKRHTTVPGSRLFFPEWDTTTAELPPLAQPPPDPGRTAKMPKRRRTRAADNAARVKAEREHNAAQ RNSRAERPPPF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: To M.tuberculosis Rv3776 [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003870 - InterPro: IPR003615 [H]
Pfam domain/function: PF02720 DUF222 [H]
EC number: NA
Molecular weight: Translated: 53130; Mature: 53130
Theoretical pI: Translated: 6.71; Mature: 6.71
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.9 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 2.9 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFDTVFAGLEESALLAAIEQSAREEAQAGARKLAAIAQLVHLTVTCDEECDGWVYDSWAA CCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCCEEHHHHH AASEIGAVLNIGHKRASGQMRIAVALRDRLPKVAALYLQGRLSARLISEISWRTRLVDDE HHHHHHHHHHCCCCCCCCCEEEEEEHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH QVLGLLDAALAEAALRWGPLSEARLARALDAVIHRYDRDAVIRAKDTVKTRDFHIGSVDD HHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCEEEECCCCEECCEECCCCCC PDELVLVWGQLLGCDAAALSARIAALLKGICDNDPRSVGERRSCAVGAIVQGHDHLPCRC HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCHHHHCCHHCCCCEEEEECCCCCCCCC GSPACAAAAPEKSNVVISVIADPAAVEAAQKLIAAEDEHHAAKDEPEPVPCPQDSGVALL CCCCCCCCCCCCCCEEEEEECCCHHHHHHHHHHHCCCHHCCCCCCCCCCCCCCCCCEEEC PGVKLLPIVALAEAIRGGAAIKPLWLPGPDPEPHYRPSATLAAFVRARDLFCRFPGCDVP CCCHHHHHHHHHHHHCCCCCCCEEECCCCCCCCCCCCHHHHHHHHHHHHHHEECCCCCCC AERCDIDHVVPWPYGPTHASNLNCKCRTHHLGKTFWDGWHDEQSPDGTVTWTTPTGKRHT HHHCCCCCCCCCCCCCCCCCCCCCEEEECCCCHHHHCCCCCCCCCCCCEEECCCCCCCCC TVPGSRLFFPEWDTTTAELPPLAQPPPDPGRTAKMPKRRRTRAADNAARVKAEREHNAAQ CCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCHHHHHHHHHHHHHHH RNSRAERPPPF HCCCCCCCCCC >Mature Secondary Structure MFDTVFAGLEESALLAAIEQSAREEAQAGARKLAAIAQLVHLTVTCDEECDGWVYDSWAA CCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCCEEHHHHH AASEIGAVLNIGHKRASGQMRIAVALRDRLPKVAALYLQGRLSARLISEISWRTRLVDDE HHHHHHHHHHCCCCCCCCCEEEEEEHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH QVLGLLDAALAEAALRWGPLSEARLARALDAVIHRYDRDAVIRAKDTVKTRDFHIGSVDD HHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCEEEECCCCEECCEECCCCCC PDELVLVWGQLLGCDAAALSARIAALLKGICDNDPRSVGERRSCAVGAIVQGHDHLPCRC HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCHHHHCCHHCCCCEEEEECCCCCCCCC GSPACAAAAPEKSNVVISVIADPAAVEAAQKLIAAEDEHHAAKDEPEPVPCPQDSGVALL CCCCCCCCCCCCCCEEEEEECCCHHHHHHHHHHHCCCHHCCCCCCCCCCCCCCCCCEEEC PGVKLLPIVALAEAIRGGAAIKPLWLPGPDPEPHYRPSATLAAFVRARDLFCRFPGCDVP CCCHHHHHHHHHHHHCCCCCCCEEECCCCCCCCCCCCHHHHHHHHHHHHHHEECCCCCCC AERCDIDHVVPWPYGPTHASNLNCKCRTHHLGKTFWDGWHDEQSPDGTVTWTTPTGKRHT HHHCCCCCCCCCCCCCCCCCCCCCEEEECCCCHHHHCCCCCCCCCCCCEEECCCCCCCCC TVPGSRLFFPEWDTTTAELPPLAQPPPDPGRTAKMPKRRRTRAADNAARVKAEREHNAAQ CCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCHHHHHHHHHHHHHHH RNSRAERPPPF HCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]