Definition | Mycobacterium sp. MCS chromosome, complete genome. |
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Accession | NC_008146 |
Length | 5,705,448 |
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The map label for this gene is 108797568
Identifier: 108797568
GI number: 108797568
Start: 648093
End: 648797
Strand: Reverse
Name: 108797568
Synonym: Mmcs_0588
Alternate gene names: NA
Gene position: 648797-648093 (Counterclockwise)
Preceding gene: 108797571
Following gene: 108797567
Centisome position: 11.37
GC content: 69.5
Gene sequence:
>705_bases GTGCGTACTGGTCACCCGCGACGGCGAACGGCAGGTCTTCGTCTACGACGACGACAGCGACGAGCCTGCCAAGGAACTGG TGCTGGCACCCGACGAGGCCGACGGTGTCGCGGAGATCCTGCACAGCCGCCCCATCGCCGACCGGGTCCGGTCGCTGGAA CGCCGCGTCGATGCGCTGATCGGAGAACGGGCATCATGACGATTACGACGGCCACCGGATGGACCGCCCGATTGAATGAA GTCGCCATGCAAGCACACGAGATCGCGGTCTCGCCCCCGACCGTCCGCATGGACGATCCGGTGTCCAAGGCGGTGCAGCT CATGGTCGTCAACCGGCTGCCCGGGCTCGTCGTCGTCGACGACGCGGACCACCCGATCGCCGTCCTGCCCGGCACGCAGG TCCTCCGCCTGACCATCCCCGAGACCTACCGCGACGATCCGGCCCTGGTCCGCACCGTCGACGAGATCCACGCCGACCTG TTCTGGCACGGCCCCGGGCGGCTCACCGTCGGCGACTGCCTGCCGTCACCCGTCGCGAAACCCGCGACGGTGGCGCCCGA CGCCACCCTGCTCGAGGTCGCGACCGTGATGGCGACCAAGCGGAGTCCGTTGATCGCGATCGTTGACGGCGCTGGGCGAT TGACCGGTGCGGTGACCCTCGAACGGCTGCTGACCAGTCTGGCCGTCGCCGGCCCGGGCGACTGA
Upstream 100 bases:
>100_bases TGGAGGTGGACCAATAAGGAGCTGCGATGCGTATCGATCGGACGACGGTGCCCGGCGGCGGGATGCTGCACCACATCGTC ACCCGGGCCGGTGGCCGGCT
Downstream 100 bases:
>100_bases TCCCGGCTCTGCGAGCGCGTGTCAGCAGCTCCGGCCGTGTCGTTCTCGCCGGCTCCGGTGCTCGCACTGGCGATCTTCGT CGTCGCGTTCTGGTTCATCG
Product: signal transduction protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 234; Mature: 234
Protein sequence:
>234_residues MRTGHPRRRTAGLRLRRRQRRACQGTGAGTRRGRRCRGDPAQPPHRRPGPVAGTPRRCADRRTGIMTITTATGWTARLNE VAMQAHEIAVSPPTVRMDDPVSKAVQLMVVNRLPGLVVVDDADHPIAVLPGTQVLRLTIPETYRDDPALVRTVDEIHADL FWHGPGRLTVGDCLPSPVAKPATVAPDATLLEVATVMATKRSPLIAIVDGAGRLTGAVTLERLLTSLAVAGPGD
Sequences:
>Translated_234_residues MRTGHPRRRTAGLRLRRRQRRACQGTGAGTRRGRRCRGDPAQPPHRRPGPVAGTPRRCADRRTGIMTITTATGWTARLNE VAMQAHEIAVSPPTVRMDDPVSKAVQLMVVNRLPGLVVVDDADHPIAVLPGTQVLRLTIPETYRDDPALVRTVDEIHADL FWHGPGRLTVGDCLPSPVAKPATVAPDATLLEVATVMATKRSPLIAIVDGAGRLTGAVTLERLLTSLAVAGPGD >Mature_234_residues MRTGHPRRRTAGLRLRRRQRRACQGTGAGTRRGRRCRGDPAQPPHRRPGPVAGTPRRCADRRTGIMTITTATGWTARLNE VAMQAHEIAVSPPTVRMDDPVSKAVQLMVVNRLPGLVVVDDADHPIAVLPGTQVLRLTIPETYRDDPALVRTVDEIHADL FWHGPGRLTVGDCLPSPVAKPATVAPDATLLEVATVMATKRSPLIAIVDGAGRLTGAVTLERLLTSLAVAGPGD
Specific function: Unknown
COG id: COG0517
COG function: function code R; FOG: CBS domain
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25125; Mature: 25125
Theoretical pI: Translated: 11.71; Mature: 11.71
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRTGHPRRRTAGLRLRRRQRRACQGTGAGTRRGRRCRGDPAQPPHRRPGPVAGTPRRCAD CCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHH RRTGIMTITTATGWTARLNEVAMQAHEIAVSPPTVRMDDPVSKAVQLMVVNRLPGLVVVD CCCCEEEEEECCCCHHHHHHHHHHHHHEECCCCCEECCCHHHHHHHHHHHHCCCCEEEEE DADHPIAVLPGTQVLRLTIPETYRDDPALVRTVDEIHADLFWHGPGRLTVGDCLPSPVAK CCCCCEEEECCCEEEEEECCCCCCCCHHHHHHHHHHHHEEEECCCCCEEECCCCCCCCCC PATVAPDATLLEVATVMATKRSPLIAIVDGAGRLTGAVTLERLLTSLAVAGPGD CCCCCCCHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure MRTGHPRRRTAGLRLRRRQRRACQGTGAGTRRGRRCRGDPAQPPHRRPGPVAGTPRRCAD CCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHH RRTGIMTITTATGWTARLNEVAMQAHEIAVSPPTVRMDDPVSKAVQLMVVNRLPGLVVVD CCCCEEEEEECCCCHHHHHHHHHHHHHEECCCCCEECCCHHHHHHHHHHHHCCCCEEEEE DADHPIAVLPGTQVLRLTIPETYRDDPALVRTVDEIHADLFWHGPGRLTVGDCLPSPVAK CCCCCEEEECCCEEEEEECCCCCCCCHHHHHHHHHHHHEEEECCCCCEEECCCCCCCCCC PATVAPDATLLEVATVMATKRSPLIAIVDGAGRLTGAVTLERLLTSLAVAGPGD CCCCCCCHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA