Definition | Mycobacterium sp. MCS chromosome, complete genome. |
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Accession | NC_008146 |
Length | 5,705,448 |
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The map label for this gene is 108797522
Identifier: 108797522
GI number: 108797522
Start: 601479
End: 602798
Strand: Reverse
Name: 108797522
Synonym: Mmcs_0542
Alternate gene names: NA
Gene position: 602798-601479 (Counterclockwise)
Preceding gene: 108797524
Following gene: 108797521
Centisome position: 10.57
GC content: 69.77
Gene sequence:
>1320_bases GTGACTGTGGAGTTGGCGCATCCCTCGACCGAGCCGCTGGCGTCCCGGTCGCCGACCACTCCCGCCCATCCGCGCTGGTT CTTCCTGTGGACCACGCCGGGCCGCATTCTGACCATCGGCATCGTGCTCGCCGCTCTCGCGATCGCCAGCGCCTTCGCCA CGTCGACGACGATCAACGACCGCCAGCGGGCGCTCACCACCGTCCTCAACCACACCGAACCCCTGTCGTTCGCCGCCGGT GAGTTGTACAGCCGGCTCTCGGTCGCCGATGCCGCCGCCGCGACGGCGTTCATCGCCGGCACCGAACCGCGCGACGTGCG CCAGCGCTATGAACAGGCGATCACCGACGCCGCGGTCGCTCTGACGCGGGCCTCGAGTGGGCTGACCGACGAGGAGCTGG TTCAGTTGCTCGGCCGGATCAACGCCGAACTCGCGGTGTACACCGGACTGGTGGAGACGGCGCGGACCAACAACCGGGCG GGCAACCCGGTCGGCTCGTCCTACCTGTCCGAGGCGTCGTCGCTGATGCAGACCAAGATCCTGCCCGACGCCGAGCGGCT CTACGAGCGCACCTCGGCGCAGGTCGATCAGGAGACCGGCGCATCCACCCGCATCCCGGCGCCGGTCATCCTCGTGGTGC TCGCGACGCTGCTGTTCGGTCTGTTCGCCAACCGCTGGCTGGCCCGGCGCACCCGGCGGCGGGTGAACATCGGCTTCGTC GCGGGCGGTCTGGCGGTGTTGATCATGGTGTTGTGGGTCGGTACCGCGCTGACGATCTCGACCACCGACAGCCGCAGCGC CAGGGGCGCAGGCGCCGAATCGCTCAAGACGATCACCACCCTGGCCATCACCGCGCAGCAGGCCCGCGCCGACGAGACGC TCGCGCTGATCCGCCGCGGAGACGAGGAGGTCCGCAAACAGTCCTACTACCAGCGAATCGACGGTATGCAGAAGAAGCTG GCGGACTACCTCGCGCGGGAGGACGCGATCGACAGCACCGACCTGGTCGCCGCCGAGGACCTGCTGGCCCGGTGGCGGGC GGCCGACGACCGCATCAACGCCTACATCGCGGTCGGCAACTACCAGGCCGCCACCCAGGTCGCGCTCGGCACCGGCGAGG ACGATTCCACCCCGGCGTTCGACAAGCTCAACGATGCGCTGACCAAGGCGATCGAGCAGAGCCGGAGCCAGCTGCGCAAC GACATCCTCAACGCCCGGCGGGTGCTGTCGGGTGCGACGGCGGGCGCCGCGGCGCTCAGTGTGATCGCGGCGGTGGCGGT GGCGCTGGGCTTGTGGCCACGACTGAGTGAGTACCGGTGA
Upstream 100 bases:
>100_bases GCTCCGCTCGATTGGGCGCGAGCCGTGACAGAACCTCTTAGGATTCTTTTATAGAGTCGGACGGTCGGGAAGTTGCCGGA GAGATGAGGACCGCGCGCAG
Downstream 100 bases:
>100_bases TGAGCGCTCGCGCGAAGAACAGACAGCGGGTGATGAAGAGGCTGCTCGCGTTGCTCAGTGCCACGGTGCTGGTGCTGGCG GGTTGTGGCCAGGCGGCGTC
Product: hypothetical protein
Products: NA
Alternate protein names: Integral Membrane Protein
Number of amino acids: Translated: 439; Mature: 438
Protein sequence:
>439_residues MTVELAHPSTEPLASRSPTTPAHPRWFFLWTTPGRILTIGIVLAALAIASAFATSTTINDRQRALTTVLNHTEPLSFAAG ELYSRLSVADAAAATAFIAGTEPRDVRQRYEQAITDAAVALTRASSGLTDEELVQLLGRINAELAVYTGLVETARTNNRA GNPVGSSYLSEASSLMQTKILPDAERLYERTSAQVDQETGASTRIPAPVILVVLATLLFGLFANRWLARRTRRRVNIGFV AGGLAVLIMVLWVGTALTISTTDSRSARGAGAESLKTITTLAITAQQARADETLALIRRGDEEVRKQSYYQRIDGMQKKL ADYLAREDAIDSTDLVAAEDLLARWRAADDRINAYIAVGNYQAATQVALGTGEDDSTPAFDKLNDALTKAIEQSRSQLRN DILNARRVLSGATAGAAALSVIAAVAVALGLWPRLSEYR
Sequences:
>Translated_439_residues MTVELAHPSTEPLASRSPTTPAHPRWFFLWTTPGRILTIGIVLAALAIASAFATSTTINDRQRALTTVLNHTEPLSFAAG ELYSRLSVADAAAATAFIAGTEPRDVRQRYEQAITDAAVALTRASSGLTDEELVQLLGRINAELAVYTGLVETARTNNRA GNPVGSSYLSEASSLMQTKILPDAERLYERTSAQVDQETGASTRIPAPVILVVLATLLFGLFANRWLARRTRRRVNIGFV AGGLAVLIMVLWVGTALTISTTDSRSARGAGAESLKTITTLAITAQQARADETLALIRRGDEEVRKQSYYQRIDGMQKKL ADYLAREDAIDSTDLVAAEDLLARWRAADDRINAYIAVGNYQAATQVALGTGEDDSTPAFDKLNDALTKAIEQSRSQLRN DILNARRVLSGATAGAAALSVIAAVAVALGLWPRLSEYR >Mature_438_residues TVELAHPSTEPLASRSPTTPAHPRWFFLWTTPGRILTIGIVLAALAIASAFATSTTINDRQRALTTVLNHTEPLSFAAGE LYSRLSVADAAAATAFIAGTEPRDVRQRYEQAITDAAVALTRASSGLTDEELVQLLGRINAELAVYTGLVETARTNNRAG NPVGSSYLSEASSLMQTKILPDAERLYERTSAQVDQETGASTRIPAPVILVVLATLLFGLFANRWLARRTRRRVNIGFVA GGLAVLIMVLWVGTALTISTTDSRSARGAGAESLKTITTLAITAQQARADETLALIRRGDEEVRKQSYYQRIDGMQKKLA DYLAREDAIDSTDLVAAEDLLARWRAADDRINAYIAVGNYQAATQVALGTGEDDSTPAFDKLNDALTKAIEQSRSQLRND ILNARRVLSGATAGAAALSVIAAVAVALGLWPRLSEYR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 47240; Mature: 47109
Theoretical pI: Translated: 7.73; Mature: 7.73
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 0.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 0.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTVELAHPSTEPLASRSPTTPAHPRWFFLWTTPGRILTIGIVLAALAIASAFATSTTIND CEEEECCCCCCCCCCCCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHCCCHH RQRALTTVLNHTEPLSFAAGELYSRLSVADAAAATAFIAGTEPRDVRQRYEQAITDAAVA HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHH LTRASSGLTDEELVQLLGRINAELAVYTGLVETARTNNRAGNPVGSSYLSEASSLMQTKI HHHHCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHC LPDAERLYERTSAQVDQETGASTRIPAPVILVVLATLLFGLFANRWLARRTRRRVNIGFV CCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEH AGGLAVLIMVLWVGTALTISTTDSRSARGAGAESLKTITTLAITAQQARADETLALIRRG HHHHHHHHHHHHHCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCC DEEVRKQSYYQRIDGMQKKLADYLAREDAIDSTDLVAAEDLLARWRAADDRINAYIAVGN HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEECC YQAATQVALGTGEDDSTPAFDKLNDALTKAIEQSRSQLRNDILNARRVLSGATAGAAALS CCHHHHEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH VIAAVAVALGLWPRLSEYR HHHHHHHHHHHCCHHHCCC >Mature Secondary Structure TVELAHPSTEPLASRSPTTPAHPRWFFLWTTPGRILTIGIVLAALAIASAFATSTTIND EEEECCCCCCCCCCCCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHCCCHH RQRALTTVLNHTEPLSFAAGELYSRLSVADAAAATAFIAGTEPRDVRQRYEQAITDAAVA HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHH LTRASSGLTDEELVQLLGRINAELAVYTGLVETARTNNRAGNPVGSSYLSEASSLMQTKI HHHHCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHC LPDAERLYERTSAQVDQETGASTRIPAPVILVVLATLLFGLFANRWLARRTRRRVNIGFV CCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEH AGGLAVLIMVLWVGTALTISTTDSRSARGAGAESLKTITTLAITAQQARADETLALIRRG HHHHHHHHHHHHHCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCC DEEVRKQSYYQRIDGMQKKLADYLAREDAIDSTDLVAAEDLLARWRAADDRINAYIAVGN HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEECC YQAATQVALGTGEDDSTPAFDKLNDALTKAIEQSRSQLRNDILNARRVLSGATAGAAALS CCHHHHEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH VIAAVAVALGLWPRLSEYR HHHHHHHHHHHCCHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA