Definition | Mycobacterium sp. MCS chromosome, complete genome. |
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Accession | NC_008146 |
Length | 5,705,448 |
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The map label for this gene is 108797484
Identifier: 108797484
GI number: 108797484
Start: 560206
End: 561039
Strand: Reverse
Name: 108797484
Synonym: Mmcs_0504
Alternate gene names: NA
Gene position: 561039-560206 (Counterclockwise)
Preceding gene: 108797486
Following gene: 108797481
Centisome position: 9.83
GC content: 71.34
Gene sequence:
>834_bases ATGTCGAACCCACGAGGGCCCGGACAGGGTGACGAGCCGACCGAGCCGTCGGCAGCGGGTGGCCCCGGCGACCAGACCGG CCCCGACGACGCCACCAGGCCGTCTCCGACGGCCGATCACGAACCCGCCACCGAGGTGATCGCGTCCTCGTCACCGGGGG CGGACCAGTTCGAGCCGTCGGAGGGCGAACGCCGCTTCACCGCCCCGTCGGGCTTCGACGCCGGGTCCACCCAGAAGATC GACCCACCACCGGACCCGGCCACCGAGGTGTTCCCCCGCTCCGAGGGCGGCCTCCCCGGTTCGGGCACCGACCCGTTCGC CGCGCAGAAGGCCGCGGGCCCGCAGGTCATCCCCCCGCGCGGCGATGCGCCGCGACCGCCGCAGCAGGGCCGTCGCAGCT GGGGCTGGGTGGTGGCCGTCGTGTTGGTGATCGCGGCGCTGGTGGCGATCGCGATCCTGGGCACGATCCTGTTGACCCGC GGATCCGGGTCGACCGCATCGCAGGAGGATCAGGTCCGCGCGACAATCGAGCAGTTCGACGTCGCCATCCAGAACGGCGA TCTGGCGACGTTGCGGGGCATCACGTGCGGCGCCAAGCGCGACAGTTACGTCAACTACGACGACAAGGCCTGGGCGGAGA CCCACAAGCGGGTCGCCGCGGCCAAGCAGTACCCGGTGGTCGCCAGCATCGACCAGATCGTCGTCAACGGCGACCACGCG GAGGCCAACGTCACCGCCTTCATGGCCTATGCGCCGCAGACCCGCTCGACCCGCAGCTTCGACCTGGAGTTCCGCGACGA CCAGTGGAAGATCTGCCAGGCGCCGTCGCCCTAA
Upstream 100 bases:
>100_bases ATGGACAACATTGTGCCGTGCCGGTCGCGGCGCGCGGTCATCGGTCCGAATCGGCCGATAAGCTCCATCGGTAGCGTCGT TGGAGGAGGAACGCAACGGG
Downstream 100 bases:
>100_bases TCGGCGGTGACCGAGCGGCCCTCGCTGTGTAGATCCCGGCAGGCCTCGATGACACGCTCGGCCATCCCCGCCTCGGCCTT CTTCAGATAGCTGCGCGGGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 277; Mature: 276
Protein sequence:
>277_residues MSNPRGPGQGDEPTEPSAAGGPGDQTGPDDATRPSPTADHEPATEVIASSSPGADQFEPSEGERRFTAPSGFDAGSTQKI DPPPDPATEVFPRSEGGLPGSGTDPFAAQKAAGPQVIPPRGDAPRPPQQGRRSWGWVVAVVLVIAALVAIAILGTILLTR GSGSTASQEDQVRATIEQFDVAIQNGDLATLRGITCGAKRDSYVNYDDKAWAETHKRVAAAKQYPVVASIDQIVVNGDHA EANVTAFMAYAPQTRSTRSFDLEFRDDQWKICQAPSP
Sequences:
>Translated_277_residues MSNPRGPGQGDEPTEPSAAGGPGDQTGPDDATRPSPTADHEPATEVIASSSPGADQFEPSEGERRFTAPSGFDAGSTQKI DPPPDPATEVFPRSEGGLPGSGTDPFAAQKAAGPQVIPPRGDAPRPPQQGRRSWGWVVAVVLVIAALVAIAILGTILLTR GSGSTASQEDQVRATIEQFDVAIQNGDLATLRGITCGAKRDSYVNYDDKAWAETHKRVAAAKQYPVVASIDQIVVNGDHA EANVTAFMAYAPQTRSTRSFDLEFRDDQWKICQAPSP >Mature_276_residues SNPRGPGQGDEPTEPSAAGGPGDQTGPDDATRPSPTADHEPATEVIASSSPGADQFEPSEGERRFTAPSGFDAGSTQKID PPPDPATEVFPRSEGGLPGSGTDPFAAQKAAGPQVIPPRGDAPRPPQQGRRSWGWVVAVVLVIAALVAIAILGTILLTRG SGSTASQEDQVRATIEQFDVAIQNGDLATLRGITCGAKRDSYVNYDDKAWAETHKRVAAAKQYPVVASIDQIVVNGDHAE ANVTAFMAYAPQTRSTRSFDLEFRDDQWKICQAPSP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29127; Mature: 28996
Theoretical pI: Translated: 4.47; Mature: 4.47
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 1.4 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 0.4 %Met (Mature Protein) 1.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSNPRGPGQGDEPTEPSAAGGPGDQTGPDDATRPSPTADHEPATEVIASSSPGADQFEPS CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCC EGERRFTAPSGFDAGSTQKIDPPPDPATEVFPRSEGGLPGSGTDPFAAQKAAGPQVIPPR CCCEEECCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCC GDAPRPPQQGRRSWGWVVAVVLVIAALVAIAILGTILLTRGSGSTASQEDQVRATIEQFD CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHH VAIQNGDLATLRGITCGAKRDSYVNYDDKAWAETHKRVAAAKQYPVVASIDQIVVNGDHA HEECCCCEEEEECEECCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEECCEEEECCCCC EANVTAFMAYAPQTRSTRSFDLEFRDDQWKICQAPSP CCCEEEEEEECCCCCCCCEEEEEECCCCEEEECCCCC >Mature Secondary Structure SNPRGPGQGDEPTEPSAAGGPGDQTGPDDATRPSPTADHEPATEVIASSSPGADQFEPS CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCC EGERRFTAPSGFDAGSTQKIDPPPDPATEVFPRSEGGLPGSGTDPFAAQKAAGPQVIPPR CCCEEECCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCC GDAPRPPQQGRRSWGWVVAVVLVIAALVAIAILGTILLTRGSGSTASQEDQVRATIEQFD CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHH VAIQNGDLATLRGITCGAKRDSYVNYDDKAWAETHKRVAAAKQYPVVASIDQIVVNGDHA HEECCCCEEEEECEECCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEECCEEEECCCCC EANVTAFMAYAPQTRSTRSFDLEFRDDQWKICQAPSP CCCEEEEEEECCCCCCCCEEEEEECCCCEEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA