| Definition | Mycobacterium sp. MCS chromosome, complete genome. |
|---|---|
| Accession | NC_008146 |
| Length | 5,705,448 |
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The map label for this gene is narP [C]
Identifier: 108797407
GI number: 108797407
Start: 474095
End: 475729
Strand: Direct
Name: narP [C]
Synonym: Mmcs_0427
Alternate gene names: 108797407
Gene position: 474095-475729 (Clockwise)
Preceding gene: 108797403
Following gene: 108797408
Centisome position: 8.31
GC content: 70.4
Gene sequence:
>1635_bases ATGGTTCGCGACGCGCGCGCGGAGGCATCCACCGCCTACGAGCGACACGGGTGGGAGGATGCGTACAACTTGCTGTCCTC CGCTGACGCGCAGGATTCGCTCGCGGCTGAGGATCTGAACCGGCTGGCCACTGCCGCTCATCTCACCGGGCGCTTCGACG CCGCCGGTGAGGCGTGGGAACGGGCGTACCGGGCATATGTCGAGCACGGCCATGTCGCCGAGGCAGTGCGGTGCTCGTTC TGGCACGCCCTGACACTGATGCTGCGCGGCGAGCACGCACGCGGCAGCGGGTGGTTGGTCCGGGCCCAGGGTCTCCTCGA GGAGGCAGGCCTCGACAGCGTCGAACGGGGGTACTTGCGCATCCCGGTTGCGCTGCAGGCCCTCGGTGGTGGTGACCCGT CGGCCGCATATGCCGAGTTCGACGCGATCGCAGCGGTCGCGAGGCGGTTCGGCGACCCGGATCTGCGGGCTCTCGGCCAG CTCGGCCGCGGTCAGGCGCTGGTCGCCCGTGGCGAGGCCGCACGGGGAACCGCGATCTTCGACGAGGCGATGCTGGCGGT GACGACCGGTGAGGTGTCGGCGATCGCCGCCGGGATTGTCTACTGCGCCGTCATCATCTCCTGTCAGCAGGTTTTCGATG TGCGTCGGGCCGCGGAGTGGACGGCGACGATGAGCCGCTGGTGTGCCGAGCAGCAGGGCCTCAAGGCGTTCCGCGGGCAG TGTTTGGTGCACCGTTCACAGATCATGCAACTGCAGGGTGAGTGGTCGGATGCGATGGAGGAGGTACGCCGGGCCTGCGA TGCGCTGTCAGACGTCCCCGGGGATCCGGTGCTGGGTATGGCGCACTACCAGCAGGCCGAGCTGCTCCGGCTGCGCGGCG AACTGGACCGGGCCGAGCTGGCGTACCGCGAAGCCAGCGGCTGGGGGCACCCGGTGCAGCCGGGGCTGGCACTGCTACGG CTGGCCCAGGGTCGGGTGGATGATGCGCTCGCCGCGATCCGCCGCGCGATGGCAGCAGCCGAGGGACCGGTCGAACGATC CCGGGTGCTGGCCGCCTACGCGGAGATCGCGCTCGCGGCCGGTGACGTCGAAGCGGCTCGCAGTGCGGCCGAGCAGCTCG AGACCATCGCGGCGGACTTCGAGTCGCCATACCTGCGGGCGGTCGGCGAGTACGCGCGTGGCTCGGTGCTGTTGGCGGGC GGCGATCCAGCGGCGGCCTGCACGGTCCTGCGCCGATCCTGGGCGGCCTGGCAGGAGCTGGACGCGCCCTACGAGGCCGC CCGGGTGCGGCTGCGAATGGCGCAGGCGTGCCGGCGGATGAACGATGACGACACCGCCGCGATGGAGCTCGACGCCGCCC GCCGGGTGTTCGAGCAACTCGGCGCCGCACCGGCGCTGGCGCAGGTTGCCGAGGTATCCACGAACGCACCGGCAGGTGCG CCGAGCGGGCTGACCACGCGTGAGTTGGAGGTGCTGCGCCTGCTGGCGACAGGGGCGACCAACCGCGAAATCGCCCATAC GCTGGTGATCAGCGAGAAAACGGTGGCCCGCCATCTGGGCAACATCTTCAACAAGCTCGACGTTTCGTCCCGGACCGCCG CGACCGCTTACGCCTACCAGCACGACCTGGTGTAG
Upstream 100 bases:
>100_bases GACGGCCCACAGTCCGTGTGTGTCGGAGCCGGTCATTTGTCTCACCAGCGTGCAGGCGCATCCTGGATGCCAGAGGATCG CGTACCGAAAAGGGGCAGCG
Downstream 100 bases:
>100_bases CCGCCTGCGCAGAATTACCCACGCCGCCTCGCGGGGCATTTGGTCAATCCGACCGATGCGGTACCGCTCGGCCCGCCCAT ACCGTCGGGCCCATGGCACA
Product: LuxR family transcriptional regulator
Products: NA
Alternate protein names: Transcriptional Regulator LuxR Family; Response Regulator Receiver Protein; Transcriptional Regulator; TPR Repeat-Containing Protein; Regulatory Protein LuxRResponse Regulator Receiver; Transcriptional Regulator CadC
Number of amino acids: Translated: 544; Mature: 544
Protein sequence:
>544_residues MVRDARAEASTAYERHGWEDAYNLLSSADAQDSLAAEDLNRLATAAHLTGRFDAAGEAWERAYRAYVEHGHVAEAVRCSF WHALTLMLRGEHARGSGWLVRAQGLLEEAGLDSVERGYLRIPVALQALGGGDPSAAYAEFDAIAAVARRFGDPDLRALGQ LGRGQALVARGEAARGTAIFDEAMLAVTTGEVSAIAAGIVYCAVIISCQQVFDVRRAAEWTATMSRWCAEQQGLKAFRGQ CLVHRSQIMQLQGEWSDAMEEVRRACDALSDVPGDPVLGMAHYQQAELLRLRGELDRAELAYREASGWGHPVQPGLALLR LAQGRVDDALAAIRRAMAAAEGPVERSRVLAAYAEIALAAGDVEAARSAAEQLETIAADFESPYLRAVGEYARGSVLLAG GDPAAACTVLRRSWAAWQELDAPYEAARVRLRMAQACRRMNDDDTAAMELDAARRVFEQLGAAPALAQVAEVSTNAPAGA PSGLTTRELEVLRLLATGATNREIAHTLVISEKTVARHLGNIFNKLDVSSRTAATAYAYQHDLV
Sequences:
>Translated_544_residues MVRDARAEASTAYERHGWEDAYNLLSSADAQDSLAAEDLNRLATAAHLTGRFDAAGEAWERAYRAYVEHGHVAEAVRCSF WHALTLMLRGEHARGSGWLVRAQGLLEEAGLDSVERGYLRIPVALQALGGGDPSAAYAEFDAIAAVARRFGDPDLRALGQ LGRGQALVARGEAARGTAIFDEAMLAVTTGEVSAIAAGIVYCAVIISCQQVFDVRRAAEWTATMSRWCAEQQGLKAFRGQ CLVHRSQIMQLQGEWSDAMEEVRRACDALSDVPGDPVLGMAHYQQAELLRLRGELDRAELAYREASGWGHPVQPGLALLR LAQGRVDDALAAIRRAMAAAEGPVERSRVLAAYAEIALAAGDVEAARSAAEQLETIAADFESPYLRAVGEYARGSVLLAG GDPAAACTVLRRSWAAWQELDAPYEAARVRLRMAQACRRMNDDDTAAMELDAARRVFEQLGAAPALAQVAEVSTNAPAGA PSGLTTRELEVLRLLATGATNREIAHTLVISEKTVARHLGNIFNKLDVSSRTAATAYAYQHDLV >Mature_544_residues MVRDARAEASTAYERHGWEDAYNLLSSADAQDSLAAEDLNRLATAAHLTGRFDAAGEAWERAYRAYVEHGHVAEAVRCSF WHALTLMLRGEHARGSGWLVRAQGLLEEAGLDSVERGYLRIPVALQALGGGDPSAAYAEFDAIAAVARRFGDPDLRALGQ LGRGQALVARGEAARGTAIFDEAMLAVTTGEVSAIAAGIVYCAVIISCQQVFDVRRAAEWTATMSRWCAEQQGLKAFRGQ CLVHRSQIMQLQGEWSDAMEEVRRACDALSDVPGDPVLGMAHYQQAELLRLRGELDRAELAYREASGWGHPVQPGLALLR LAQGRVDDALAAIRRAMAAAEGPVERSRVLAAYAEIALAAGDVEAARSAAEQLETIAADFESPYLRAVGEYARGSVLLAG GDPAAACTVLRRSWAAWQELDAPYEAARVRLRMAQACRRMNDDDTAAMELDAARRVFEQLGAAPALAQVAEVSTNAPAGA PSGLTTRELEVLRLLATGATNREIAHTLVISEKTVARHLGNIFNKLDVSSRTAATAYAYQHDLV
Specific function: This Protein Activates The Expression Of The Nitrate Reductase (Narghji) And Formate Dehydrogenase-N (Fdnghi) Operons And Represses The Transcription Of The Fumarate Reductase (Frdabcd) Operon In Response To A Nitrate/Nitrite Induction Signal Transmitted
COG id: COG2197
COG function: function code TK; Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 58546; Mature: 58546
Theoretical pI: Translated: 5.20; Mature: 5.20
Prosite motif: PS00622 HTH_LUXR_1 ; PS50043 HTH_LUXR_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVRDARAEASTAYERHGWEDAYNLLSSADAQDSLAAEDLNRLATAAHLTGRFDAAGEAWE CCCCCHHHHHHHHHHCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHH RAYRAYVEHGHVAEAVRCSFWHALTLMLRGEHARGSGWLVRAQGLLEEAGLDSVERGYLR HHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEHHHHHHHCCCCHHHCCCEE IPVALQALGGGDPSAAYAEFDAIAAVARRFGDPDLRALGQLGRGQALVARGEAARGTAIF ECHHHHECCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCEEEECCCCCCCCHHH DEAMLAVTTGEVSAIAAGIVYCAVIISCQQVFDVRRAAEWTATMSRWCAEQQGLKAFRGQ HHHHHEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CLVHRSQIMQLQGEWSDAMEEVRRACDALSDVPGDPVLGMAHYQQAELLRLRGELDRAEL HHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCHHHH AYREASGWGHPVQPGLALLRLAQGRVDDALAAIRRAMAAAEGPVERSRVLAAYAEIALAA HHHHCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHC GDVEAARSAAEQLETIAADFESPYLRAVGEYARGSVLLAGGDPAAACTVLRRSWAAWQEL CCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCEEEECCCHHHHHHHHHHHHHHHHHC DAPYEAARVRLRMAQACRRMNDDDTAAMELDAARRVFEQLGAAPALAQVAEVSTNAPAGA CCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCC PSGLTTRELEVLRLLATGATNREIAHTLVISEKTVARHLGNIFNKLDVSSRTAATAYAYQ CCCCCHHHHHHHHHHHCCCCCHHHHHHHEECHHHHHHHHHHHHHHHCCCCHHHHHHHHHH HDLV HCCC >Mature Secondary Structure MVRDARAEASTAYERHGWEDAYNLLSSADAQDSLAAEDLNRLATAAHLTGRFDAAGEAWE CCCCCHHHHHHHHHHCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHH RAYRAYVEHGHVAEAVRCSFWHALTLMLRGEHARGSGWLVRAQGLLEEAGLDSVERGYLR HHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEHHHHHHHCCCCHHHCCCEE IPVALQALGGGDPSAAYAEFDAIAAVARRFGDPDLRALGQLGRGQALVARGEAARGTAIF ECHHHHECCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCEEEECCCCCCCCHHH DEAMLAVTTGEVSAIAAGIVYCAVIISCQQVFDVRRAAEWTATMSRWCAEQQGLKAFRGQ HHHHHEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CLVHRSQIMQLQGEWSDAMEEVRRACDALSDVPGDPVLGMAHYQQAELLRLRGELDRAEL HHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCHHHH AYREASGWGHPVQPGLALLRLAQGRVDDALAAIRRAMAAAEGPVERSRVLAAYAEIALAA HHHHCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHC GDVEAARSAAEQLETIAADFESPYLRAVGEYARGSVLLAGGDPAAACTVLRRSWAAWQEL CCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCEEEECCCHHHHHHHHHHHHHHHHHC DAPYEAARVRLRMAQACRRMNDDDTAAMELDAARRVFEQLGAAPALAQVAEVSTNAPAGA CCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCC PSGLTTRELEVLRLLATGATNREIAHTLVISEKTVARHLGNIFNKLDVSSRTAATAYAYQ CCCCCHHHHHHHHHHHCCCCCHHHHHHHEECHHHHHHHHHHHHHHHCCCCHHHHHHHHHH HDLV HCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA