Definition | Mycobacterium sp. MCS chromosome, complete genome. |
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Accession | NC_008146 |
Length | 5,705,448 |
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The map label for this gene is 108797398
Identifier: 108797398
GI number: 108797398
Start: 464502
End: 464927
Strand: Reverse
Name: 108797398
Synonym: Mmcs_0418
Alternate gene names: NA
Gene position: 464927-464502 (Counterclockwise)
Preceding gene: 108797399
Following gene: 108797397
Centisome position: 8.15
GC content: 65.96
Gene sequence:
>426_bases GTGAGACGACTGGTGGTGCGAGCAGGAGCAGTGGTGGGTGCCGTCGTCACTTCAGGATGCGGTTTGACCGGCTCGCCGCC GAGTGAACCGTCCGCGCAGGCGGGCCAGATCACGCTCGACGGTCAGACGCGCGAAACCCGGTCCGTCGAGTGCAGTCAGA TCGAGTGGTCGCTGATGATCGACGCGGGCGCTGAACCTGGCCGGGCCCACGCATATCTGCGCCTCGGAGGTCAGGAGCCG GTAGTCGAGACGGTCAGCATCGACGACATCGGCCCTGTGAACGGCGTCGCCGGGGGTGATCTGGGCAAGGCCGAGGCCAC CCTCGACGACACCATCTACACGATCACAGGCACGGTGGTCGGACCCGATCCGGCCAACCCCGGACAATCGCAGACAATGC CCTTCGAGATCAAAGCGCCCTGCTGA
Upstream 100 bases:
>100_bases TTCCAGCAGCACCGGCGACTGAGCGACGTCTCCCGCGATGTGGTTCTCACGCGAGTTGTGACCAGATCCGGGTATCCGAG TTTCGGCTAGGAGGTGTTCG
Downstream 100 bases:
>100_bases ACCTCCGGGTTCCGGAGGTGTAGCGACTACGGCGCCGGTGGCGGAGCCGTCACCGTCACCGTTGTCGTGCTGACGGTGGT GCTCGTGGTCGTGCTGGTGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 141; Mature: 141
Protein sequence:
>141_residues MRRLVVRAGAVVGAVVTSGCGLTGSPPSEPSAQAGQITLDGQTRETRSVECSQIEWSLMIDAGAEPGRAHAYLRLGGQEP VVETVSIDDIGPVNGVAGGDLGKAEATLDDTIYTITGTVVGPDPANPGQSQTMPFEIKAPC
Sequences:
>Translated_141_residues MRRLVVRAGAVVGAVVTSGCGLTGSPPSEPSAQAGQITLDGQTRETRSVECSQIEWSLMIDAGAEPGRAHAYLRLGGQEP VVETVSIDDIGPVNGVAGGDLGKAEATLDDTIYTITGTVVGPDPANPGQSQTMPFEIKAPC >Mature_141_residues MRRLVVRAGAVVGAVVTSGCGLTGSPPSEPSAQAGQITLDGQTRETRSVECSQIEWSLMIDAGAEPGRAHAYLRLGGQEP VVETVSIDDIGPVNGVAGGDLGKAEATLDDTIYTITGTVVGPDPANPGQSQTMPFEIKAPC
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14418; Mature: 14418
Theoretical pI: Translated: 4.18; Mature: 4.18
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRRLVVRAGAVVGAVVTSGCGLTGSPPSEPSAQAGQITLDGQTRETRSVECSQIEWSLMI CCEEEEECCHHEEHHHHCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCEECEEEEEEEE DAGAEPGRAHAYLRLGGQEPVVETVSIDDIGPVNGVAGGDLGKAEATLDDTIYTITGTVV ECCCCCCCEEEEEEECCCCCEEEEEECCCCCCCCCCCCCCCCCCCEECCCEEEEEEEEEE GPDPANPGQSQTMPFEIKAPC CCCCCCCCCCCCCCEEEECCC >Mature Secondary Structure MRRLVVRAGAVVGAVVTSGCGLTGSPPSEPSAQAGQITLDGQTRETRSVECSQIEWSLMI CCEEEEECCHHEEHHHHCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCEECEEEEEEEE DAGAEPGRAHAYLRLGGQEPVVETVSIDDIGPVNGVAGGDLGKAEATLDDTIYTITGTVV ECCCCCCCEEEEEEECCCCCEEEEEECCCCCCCCCCCCCCCCCCCEECCCEEEEEEEEEE GPDPANPGQSQTMPFEIKAPC CCCCCCCCCCCCCCEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA