Definition | Mycobacterium sp. MCS chromosome, complete genome. |
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Accession | NC_008146 |
Length | 5,705,448 |
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The map label for this gene is 108797379
Identifier: 108797379
GI number: 108797379
Start: 444610
End: 445323
Strand: Direct
Name: 108797379
Synonym: Mmcs_0399
Alternate gene names: NA
Gene position: 444610-445323 (Clockwise)
Preceding gene: 108797377
Following gene: 108797381
Centisome position: 7.79
GC content: 68.21
Gene sequence:
>714_bases ATGGCGGTCGTCGCCGGTCCCGGCCGGTTCGAGGAAGCCGCCTCCGCCGCACTGGGCCTCGCGCTGCTGACGCTGTGGGT CGGCAGGCGCCGCGGGGTTCCGGTGCACGCACTCGAGGCGTTCGGCGTCGCCTTCTTCGCGGTGCTGGCCGTCCTCGGGC TGATCGCCCCGCCGGACACCATCCGGTGGCTGGAACTGTGGGCCGGCGAAATGAGCAACGTCGCACTGGCGCTCTTCGCG GTCGCCACACTGCTGACCCGGCGTCCGTTTACCCTGGCGTACGCGAAAGACACTGCACCACAGGAGTACTGGGACAGCCC GGTCTTCCTCCGGATCAACTACGTCATCTCGGCGGTGTGGGCGAGTGCCTTCCTGGTGTCGGCGGCCGCAGGCGCGTACG CGGACGGGGTGCTGGGCGACAACGACAACTTCTGGTTCTCCTGGATCGTGCCGCTGGCCGCGATCATCTTCGCCGGGGCC TTCACCGACCACTACCCGGACCGCGCGACGGGCGAGAGCACGGCCTCCTGGGCGCGGGTGTTCGACTGGTTGCCGATTTT CGTCGTCATCACCGGCATCGTCGGCTGGGTGTCGGATTCGACCTCCGACACGGTCGGCATCGCGCTGATCGTCATCGGCA GCGTCGGGTCGGCGTTGATGCGCAAGGTTTTTCCCGACGAGCCGGCGAAAATCCCCGGGCCGTCACAGTCATAG
Upstream 100 bases:
>100_bases CATTGCAGCACAACCGGCGGGGACGGCATAGAGTCCGGGCATGAAATTGATCGACGGCTACGTCAGATCGCCGTTCGCGG GTCTCGCGCCGTGGATCCTG
Downstream 100 bases:
>100_bases AGACCGCGTGAGATCCCGCGTCGCCGGGCCCTCGAGCAGGGTCCCGTCCGGTGCGAAACGCGACCCGTGCAACGGGCATT CCCACGATTCGTCGGAGTCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 237; Mature: 236
Protein sequence:
>237_residues MAVVAGPGRFEEAASAALGLALLTLWVGRRRGVPVHALEAFGVAFFAVLAVLGLIAPPDTIRWLELWAGEMSNVALALFA VATLLTRRPFTLAYAKDTAPQEYWDSPVFLRINYVISAVWASAFLVSAAAGAYADGVLGDNDNFWFSWIVPLAAIIFAGA FTDHYPDRATGESTASWARVFDWLPIFVVITGIVGWVSDSTSDTVGIALIVIGSVGSALMRKVFPDEPAKIPGPSQS
Sequences:
>Translated_237_residues MAVVAGPGRFEEAASAALGLALLTLWVGRRRGVPVHALEAFGVAFFAVLAVLGLIAPPDTIRWLELWAGEMSNVALALFA VATLLTRRPFTLAYAKDTAPQEYWDSPVFLRINYVISAVWASAFLVSAAAGAYADGVLGDNDNFWFSWIVPLAAIIFAGA FTDHYPDRATGESTASWARVFDWLPIFVVITGIVGWVSDSTSDTVGIALIVIGSVGSALMRKVFPDEPAKIPGPSQS >Mature_236_residues AVVAGPGRFEEAASAALGLALLTLWVGRRRGVPVHALEAFGVAFFAVLAVLGLIAPPDTIRWLELWAGEMSNVALALFAV ATLLTRRPFTLAYAKDTAPQEYWDSPVFLRINYVISAVWASAFLVSAAAGAYADGVLGDNDNFWFSWIVPLAAIIFAGAF TDHYPDRATGESTASWARVFDWLPIFVVITGIVGWVSDSTSDTVGIALIVIGSVGSALMRKVFPDEPAKIPGPSQS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25288; Mature: 25157
Theoretical pI: Translated: 4.60; Mature: 4.60
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 0.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAVVAGPGRFEEAASAALGLALLTLWVGRRRGVPVHALEAFGVAFFAVLAVLGLIAPPDT CEEECCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCH IRWLELWAGEMSNVALALFAVATLLTRRPFTLAYAKDTAPQEYWDSPVFLRINYVISAVW HHHHHHHHCHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCHHHCCCCEEEHHHHHHHHHH ASAFLVSAAAGAYADGVLGDNDNFWFSWIVPLAAIIFAGAFTDHYPDRATGESTASWARV HHHHHHHHHHCHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHH FDWLPIFVVITGIVGWVSDSTSDTVGIALIVIGSVGSALMRKVFPDEPAKIPGPSQS HHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC >Mature Secondary Structure AVVAGPGRFEEAASAALGLALLTLWVGRRRGVPVHALEAFGVAFFAVLAVLGLIAPPDT EEECCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCH IRWLELWAGEMSNVALALFAVATLLTRRPFTLAYAKDTAPQEYWDSPVFLRINYVISAVW HHHHHHHHCHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCHHHCCCCEEEHHHHHHHHHH ASAFLVSAAAGAYADGVLGDNDNFWFSWIVPLAAIIFAGAFTDHYPDRATGESTASWARV HHHHHHHHHHCHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHH FDWLPIFVVITGIVGWVSDSTSDTVGIALIVIGSVGSALMRKVFPDEPAKIPGPSQS HHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA