Definition | Mycobacterium sp. MCS chromosome, complete genome. |
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Accession | NC_008146 |
Length | 5,705,448 |
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The map label for this gene is 108797377
Identifier: 108797377
GI number: 108797377
Start: 443387
End: 444040
Strand: Direct
Name: 108797377
Synonym: Mmcs_0397
Alternate gene names: NA
Gene position: 443387-444040 (Clockwise)
Preceding gene: 108797376
Following gene: 108797379
Centisome position: 7.77
GC content: 68.81
Gene sequence:
>654_bases ATGCGCCGACTGTTGACCCTGCTGTGCGCAGCCGCCGTGTGTCTGGTCGCCGGGGCACCGGTCGCACCAGCCACCGCCCC GTGGTTCGCCTCGTCGGTCGGGGCGGCGACCCAGGTGATCTCCGTTGTGGGCGTGGGCGGTTCGTCGGCCAAGATGGATG TCTACCAGCGCACGGCGGTGGGTTGGCAGCCGGTCGCCGCGGGCATCCCCGCGTTCATCGGCGCCAAGGGGATGGCGCCG CAGACCCACGACGGTGAGATGAAGACGCCGATGGGGGTGTTCACGCTCGACTTCGCGTTCGGCACCGAACCCAACCCGGG CGGCGGACTGCCCTACGTCCAGGTCGGGCCCGACCACTGGTGGGACGGGGACATGAAGAGCCCCACCTACAACACCATGC AGGTGTGCAAGAAGGAACAGTGCCGGTTCAACACATCGCTGAGTGCGGGGACCGAGAACCTCGACATCCCGCAGTACCGG CACGCGGTGGTGATGGGGGTCAACAAAGCGCGTGTGCCGGGCAACGGCGGCGCCTTCTTCGTGCACTCCACCGACGGTGG GCCGACGGCCGGGTGCGTGGCCATCGACGACGGCACGCTGGTCGAGGTCATGCGGTGGCTGCGGTCCGGTGCGCTGATCG CGCTCTCGAAGTGA
Upstream 100 bases:
>100_bases GGCAGGTGTGGGCGCAGTGGCTCGACGGGGTCCTCGGTCGCGACCCGATCGTGTCCGAACGTTGACGTGACCGAGAGGCC GACCGCCCAGGATGGGTGGG
Downstream 100 bases:
>100_bases ACCGTCAAAGGTTCAGTGCACGACCACGTTTGAGCTTGAAGTTGAGGTTGTCCAGCGACATGCTCGCATCGTAGGTGCGG TCGTAACCGGTGGCGCAGAT
Product: hypothetical protein
Products: NA
Alternate protein names: ErfK/YbiS/YcfS/YnhG Family Protein; S-Layer Homology And Secreted GW Repeat Fusion Protein; S-Layer Domain Protein; S-Layer Domain-Containing Protein; SH3 Domain-Containing Protein; Secreted GW Repeat; Lipoprotein
Number of amino acids: Translated: 217; Mature: 217
Protein sequence:
>217_residues MRRLLTLLCAAAVCLVAGAPVAPATAPWFASSVGAATQVISVVGVGGSSAKMDVYQRTAVGWQPVAAGIPAFIGAKGMAP QTHDGEMKTPMGVFTLDFAFGTEPNPGGGLPYVQVGPDHWWDGDMKSPTYNTMQVCKKEQCRFNTSLSAGTENLDIPQYR HAVVMGVNKARVPGNGGAFFVHSTDGGPTAGCVAIDDGTLVEVMRWLRSGALIALSK
Sequences:
>Translated_217_residues MRRLLTLLCAAAVCLVAGAPVAPATAPWFASSVGAATQVISVVGVGGSSAKMDVYQRTAVGWQPVAAGIPAFIGAKGMAP QTHDGEMKTPMGVFTLDFAFGTEPNPGGGLPYVQVGPDHWWDGDMKSPTYNTMQVCKKEQCRFNTSLSAGTENLDIPQYR HAVVMGVNKARVPGNGGAFFVHSTDGGPTAGCVAIDDGTLVEVMRWLRSGALIALSK >Mature_217_residues MRRLLTLLCAAAVCLVAGAPVAPATAPWFASSVGAATQVISVVGVGGSSAKMDVYQRTAVGWQPVAAGIPAFIGAKGMAP QTHDGEMKTPMGVFTLDFAFGTEPNPGGGLPYVQVGPDHWWDGDMKSPTYNTMQVCKKEQCRFNTSLSAGTENLDIPQYR HAVVMGVNKARVPGNGGAFFVHSTDGGPTAGCVAIDDGTLVEVMRWLRSGALIALSK
Specific function: Unknown
COG id: COG3786
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22626; Mature: 22626
Theoretical pI: Translated: 7.88; Mature: 7.88
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 4.1 %Met (Translated Protein) 6.5 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 4.1 %Met (Mature Protein) 6.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRRLLTLLCAAAVCLVAGAPVAPATAPWFASSVGAATQVISVVGVGGSSAKMDVYQRTAV CHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHEECCCCCCHHHHHHHHHC GWQPVAAGIPAFIGAKGMAPQTHDGEMKTPMGVFTLDFAFGTEPNPGGGLPYVQVGPDHW CCCCHHHCCCHHHCCCCCCCCCCCCCCCCCCEEEEEEEEECCCCCCCCCCCEEEECCCCC WDGDMKSPTYNTMQVCKKEQCRFNTSLSAGTENLDIPQYRHAVVMGVNKARVPGNGGAFF CCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHEEEEEECCCCCCCCCCCEEE VHSTDGGPTAGCVAIDDGTLVEVMRWLRSGALIALSK EECCCCCCCEEEEEECCCCHHHHHHHHHCCCEEEECC >Mature Secondary Structure MRRLLTLLCAAAVCLVAGAPVAPATAPWFASSVGAATQVISVVGVGGSSAKMDVYQRTAV CHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHEECCCCCCHHHHHHHHHC GWQPVAAGIPAFIGAKGMAPQTHDGEMKTPMGVFTLDFAFGTEPNPGGGLPYVQVGPDHW CCCCHHHCCCHHHCCCCCCCCCCCCCCCCCCEEEEEEEEECCCCCCCCCCCEEEECCCCC WDGDMKSPTYNTMQVCKKEQCRFNTSLSAGTENLDIPQYRHAVVMGVNKARVPGNGGAFF CCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHEEEEEECCCCCCCCCCCEEE VHSTDGGPTAGCVAIDDGTLVEVMRWLRSGALIALSK EECCCCCCCEEEEEECCCCHHHHHHHHHCCCEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA