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The map label for this gene is eccD3 [H]

Identifier: 108797359

GI number: 108797359

Start: 424468

End: 425847

Strand: Direct

Name: eccD3 [H]

Synonym: Mmcs_0379

Alternate gene names: 108797359

Gene position: 424468-425847 (Clockwise)

Preceding gene: 108797358

Following gene: 108797360

Centisome position: 7.44

GC content: 73.62

Gene sequence:

>1380_bases
GTGGCCGTACTCGCCGGTGGTGACGACGGCGGTCGGCTGACCGAGATGGCGCTGCCCGCCGGCCTGCCGCTGCGTGAGAT
CCTGCCCGCCGTGCAGCGCATGGCGCGTCCGCACGACGACGGCGACCGCGACGATCCGGCGCCCCAACCGGCGAGGCTGA
GCCTCGCGCCGATCGGCGGTGCGCCGTTCAGCCTCGACGCGACGCTGGACACCGTCGGCGTGGTCGACGGGGACCTGCTG
GCGCTGCAGCCGGTGCCCGCGGGCCCGAGCGCGCCGCGCATCGTCGAGGACATCGCCGACGCGGCGGTGATCTTCTCCGC
CGCGCGGGAGAAGCGTTGGGGACCAACGCACATCAGGCGCGCCGCCGCGGCCGCGGTGGTGGGTCTGATCCTGGTCGTCA
CCGGCCTGAGCGTCGCGCATCGCCTCGTCACCGACGACGGGATCGGCCTGATCGTGGTGTGTGCCGTGGCGGTGGCCGCG
GTGCTCGGCGCGCTGCTCAGCCGCGCGTCCTCGCCGGCGCTCGCGAGCACCCTGGCCCTGAGCGCACTGCCCGCGGTGGC
GGCCGCGTTCGCGCTGGCGGTGCCCGGCGACTTCGGCGCCGCGCAGATCCTGCTCGCCGCGGCGGGGGTCACCGCCTGGT
CGGTGATCAGCCTGACCACGGGCGACCGGGCCGTCGCGGTGTTCACCACCACCGCGGCAACGGGTTTCGGGGTGCTGCTC
ACCGCCGCCGCGGCATCGCTGTGGACGCTGTCGGAGACGGTGCTGGGTTGTGTGCTGATCCTCACCGGCCTGCTGGTGAC
CGTGCAGGCCGCGCAGTTGTCGGCGATGTGGGCCCGGTTCCCGCTGCCGGTGATCCCGGCGCCCGGCGACCCGACGCCGT
CGGCGCAACCGCTGCGGGTGCTCGAGGATCTGCCGCGCCGCGTGCAGCTGAGCCAGTCGCACCAGACCGGTTTCCTGGCC
GCGGGTGTGGTGCTCGGCGTGACGGGATCGCTTGTGCTGGTGGGTCAGCAGGACGTGTCGCGGTGGGCGTGGTACGTCGT
GGTGGCCGTGGCGGCAGGCGCGGTGCTCCGCGCCCGCGTCTGGGATTCGGCACCGTGCAAGGCGTGGCTGCTCGCCCACC
CGCTGTTGCTCGGCGTGGTGTTGCTCGTACTCTTCGCCGCCACCGACCGGTTCGACGCCGCCTGGTGGGCACTGGCCGCG
ACGGCGGCGGTCGTCGTGGTGTGGGTGATCGTCGCGCTCAACCCGTCGATTGCCTCCCCCGAGACGTACTCGCTGCCCAT
GCGCAGGCTCGTGGGGTTCGCCGCGACGGCAGTCGACGCCTCGCTGATCCCCGTGATGGCCCTGCTCGTCGGACTGTTCA
GCTGGGTGCTCAACAGGTGA

Upstream 100 bases:

>100_bases
GACACCCGACCCCGCGACGAATACGACACGAGAGAACCGAGAACACGACATGCCCGACACCACGACACTGTCCGACAACA
CTGTGATGCCGATCGTGCGG

Downstream 100 bases:

>100_bases
TCCGATCCCTCGCCTTGCTCGCCGTCACCGGTGCGGTCGCGCTGCTCGCCGCACCGTCGGCCGCTGCGGTGACCCCACCG
CAGGTGGATCCCGCGACACC

Product: hypothetical protein

Products: NA

Alternate protein names: ESX conserved component D3; Type VII secretion system protein eccD3; T7SS protein eccD3 [H]

Number of amino acids: Translated: 459; Mature: 458

Protein sequence:

>459_residues
MAVLAGGDDGGRLTEMALPAGLPLREILPAVQRMARPHDDGDRDDPAPQPARLSLAPIGGAPFSLDATLDTVGVVDGDLL
ALQPVPAGPSAPRIVEDIADAAVIFSAAREKRWGPTHIRRAAAAAVVGLILVVTGLSVAHRLVTDDGIGLIVVCAVAVAA
VLGALLSRASSPALASTLALSALPAVAAAFALAVPGDFGAAQILLAAAGVTAWSVISLTTGDRAVAVFTTTAATGFGVLL
TAAAASLWTLSETVLGCVLILTGLLVTVQAAQLSAMWARFPLPVIPAPGDPTPSAQPLRVLEDLPRRVQLSQSHQTGFLA
AGVVLGVTGSLVLVGQQDVSRWAWYVVVAVAAGAVLRARVWDSAPCKAWLLAHPLLLGVVLLVLFAATDRFDAAWWALAA
TAAVVVVWVIVALNPSIASPETYSLPMRRLVGFAATAVDASLIPVMALLVGLFSWVLNR

Sequences:

>Translated_459_residues
MAVLAGGDDGGRLTEMALPAGLPLREILPAVQRMARPHDDGDRDDPAPQPARLSLAPIGGAPFSLDATLDTVGVVDGDLL
ALQPVPAGPSAPRIVEDIADAAVIFSAAREKRWGPTHIRRAAAAAVVGLILVVTGLSVAHRLVTDDGIGLIVVCAVAVAA
VLGALLSRASSPALASTLALSALPAVAAAFALAVPGDFGAAQILLAAAGVTAWSVISLTTGDRAVAVFTTTAATGFGVLL
TAAAASLWTLSETVLGCVLILTGLLVTVQAAQLSAMWARFPLPVIPAPGDPTPSAQPLRVLEDLPRRVQLSQSHQTGFLA
AGVVLGVTGSLVLVGQQDVSRWAWYVVVAVAAGAVLRARVWDSAPCKAWLLAHPLLLGVVLLVLFAATDRFDAAWWALAA
TAAVVVVWVIVALNPSIASPETYSLPMRRLVGFAATAVDASLIPVMALLVGLFSWVLNR
>Mature_458_residues
AVLAGGDDGGRLTEMALPAGLPLREILPAVQRMARPHDDGDRDDPAPQPARLSLAPIGGAPFSLDATLDTVGVVDGDLLA
LQPVPAGPSAPRIVEDIADAAVIFSAAREKRWGPTHIRRAAAAAVVGLILVVTGLSVAHRLVTDDGIGLIVVCAVAVAAV
LGALLSRASSPALASTLALSALPAVAAAFALAVPGDFGAAQILLAAAGVTAWSVISLTTGDRAVAVFTTTAATGFGVLLT
AAAASLWTLSETVLGCVLILTGLLVTVQAAQLSAMWARFPLPVIPAPGDPTPSAQPLRVLEDLPRRVQLSQSHQTGFLAA
GVVLGVTGSLVLVGQQDVSRWAWYVVVAVAAGAVLRARVWDSAPCKAWLLAHPLLLGVVLLVLFAATDRFDAAWWALAAT
AAVVVVWVIVALNPSIASPETYSLPMRRLVGFAATAVDASLIPVMALLVGLFSWVLNR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the eccD/snm4 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006707 [H]

Pfam domain/function: PF04600 DUF571 [H]

EC number: NA

Molecular weight: Translated: 47003; Mature: 46872

Theoretical pI: Translated: 6.02; Mature: 6.02

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAVLAGGDDGGRLTEMALPAGLPLREILPAVQRMARPHDDGDRDDPAPQPARLSLAPIGG
CEEEECCCCCCCEEHHHCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEECCC
APFSLDATLDTVGVVDGDLLALQPVPAGPSAPRIVEDIADAAVIFSAAREKRWGPTHIRR
CCEEECCCHHHHCCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHH
AAAAAVVGLILVVTGLSVAHRLVTDDGIGLIVVCAVAVAAVLGALLSRASSPALASTLAL
HHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHH
SALPAVAAAFALAVPGDFGAAQILLAAAGVTAWSVISLTTGDRAVAVFTTTAATGFGVLL
HHHHHHHHHHHHHCCCCCCHHHHHHHHHCCHHEEEEEEECCCCEEEEEEECHHHHHHHHH
TAAAASLWTLSETVLGCVLILTGLLVTVQAAQLSAMWARFPLPVIPAPGDPTPSAQPLRV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEECCCCCCCCCCCHHHH
LEDLPRRVQLSQSHQTGFLAAGVVLGVTGSLVLVGQQDVSRWAWYVVVAVAAGAVLRARV
HHHCHHHHHHCCCCCCCHHHHHHHHHCCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHH
WDSAPCKAWLLAHPLLLGVVLLVLFAATDRFDAAWWALAATAAVVVVWVIVALNPSIASP
CCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
ETYSLPMRRLVGFAATAVDASLIPVMALLVGLFSWVLNR
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
AVLAGGDDGGRLTEMALPAGLPLREILPAVQRMARPHDDGDRDDPAPQPARLSLAPIGG
EEEECCCCCCCEEHHHCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEECCC
APFSLDATLDTVGVVDGDLLALQPVPAGPSAPRIVEDIADAAVIFSAAREKRWGPTHIRR
CCEEECCCHHHHCCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHH
AAAAAVVGLILVVTGLSVAHRLVTDDGIGLIVVCAVAVAAVLGALLSRASSPALASTLAL
HHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHH
SALPAVAAAFALAVPGDFGAAQILLAAAGVTAWSVISLTTGDRAVAVFTTTAATGFGVLL
HHHHHHHHHHHHHCCCCCCHHHHHHHHHCCHHEEEEEEECCCCEEEEEEECHHHHHHHHH
TAAAASLWTLSETVLGCVLILTGLLVTVQAAQLSAMWARFPLPVIPAPGDPTPSAQPLRV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEECCCCCCCCCCCHHHH
LEDLPRRVQLSQSHQTGFLAAGVVLGVTGSLVLVGQQDVSRWAWYVVVAVAAGAVLRARV
HHHCHHHHHHCCCCCCCHHHHHHHHHCCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHH
WDSAPCKAWLLAHPLLLGVVLLVLFAATDRFDAAWWALAATAAVVVVWVIVALNPSIASP
CCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
ETYSLPMRRLVGFAATAVDASLIPVMALLVGLFSWVLNR
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]