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The map label for this gene is 108797340

Identifier: 108797340

GI number: 108797340

Start: 401138

End: 402442

Strand: Reverse

Name: 108797340

Synonym: Mmcs_0360

Alternate gene names: NA

Gene position: 402442-401138 (Counterclockwise)

Preceding gene: 108797342

Following gene: 108797339

Centisome position: 7.05

GC content: 70.42

Gene sequence:

>1305_bases
ATGGCTGACATGGCCGGACCCCGGGCTCAGGGCCTGACGCTGGACATCGCCGGTCGCACGCTGACCGTCACCCACCCCGA
CAAGGTCGTCTTCGAGACGCACCAGGGCAGGCCGCCGATCAGCAAACTGGACCTGATCGAGTACTACCTCGCCGTGGCCG
ACGGCGCCCTGCGCGGCGTCGCGGACCGGCCGATGATCCTCAAACGCTTCGTCAAGGGCATCACCGAGGAGGCGGTGTTC
CAGAAGCGCGCACCGGCCAAGCGCCCCGACTACGTCGACGTCGCGGAACTGAAGTACGCCTCGGGCACCTCGGCGAAGGA
GGCGGTGATCCACGACGCCGCGGGGCTGGCGTGGGCGGTCAACATCGGATGCGTCGACCTCAACCCCCATCCGACGCGTT
CGGGCGATCTCGCCCATCCCGACGAACTGAGGGTCGACCTCGACCCGATGCCGGGTGTCGACTGGCAGCAGATAGTCGCC
GTCGCGATGGTGGCCCGAGAAGTGCTCGAGGACCACGGCCTGACCGCCTGGCCGAAGACCTCGGGTTCGCGCGGCTTCCA
CATCTATGCCCGCATCGAACCGCGCTGGCCGTTCAAATTCGTCCGGCTGGCCGCCCAGACGATCGCCCGCGAGGTGGAGC
GGCGCGCGCCCGACCTCGCGACCAGCCGGTGGTGGAAGGAGGAACGCGAAGGGGTGTTCGTGGACTTCAACCAGAACGCC
TTCGACCGCACCGTCGCGTCGGCGTACTCGGTGCGCGCCACCCCGGACGCCCGGGTGTCCACCCCGCTGCGCTGGGACGA
GGTGCCGGGCTGCCGGCCCGAGGCGTTCACCGTCGCGACCGTGCCCGCCCGCTACGCCGAGATCGGCGATCCGTGGGAGT
CGATGGACGACCATCCCGGCCGGCTGGACGCGCTGCTCGATCTCGCCGACCGACTGGGGCCGGCCGAGAAGGCGCCCCGC
GGCGCCAAACGGCAGGGCGCTGGGGCCACAGGCCGCAGGCAGTCGGTGATGCCGCTCATCGAGATCGCCCGCACCAAGAC
CAAGGACGAGGCACTGGCCGCACTCGACACCTGGCGTCAGCGCCACCCGGCCGCGGCGGAACGGCTGCAACCGCCCGACG
TCCTCGTCGACGGGATGCGCGGTCCCAGTTCCATCTGGTACCGGATCCGGATCAACCTCCGGCACGTCCCGGAGGAGCAG
CGTCCGCCGCAGGAACCGCTGCTGGCCGATTACAGTCCGTGGGAGAACTACACCGGGCCCCAGTGGGCCTCCCAGTCGCG
GCACGGCCCGGATACCGACCGGTAA

Upstream 100 bases:

>100_bases
CCTTCGCGGCAACCTGCGACGGAAGTTCGGTGAGCTTCGGCATGTCACCACAATATGTGACCCATGTCGCAGCGGAGGCG
GGTATCGGACAGTCCTTACC

Downstream 100 bases:

>100_bases
CAATCGCATCACGAGTCCCGCGAATAGCAACTCTTACCAAAGGTTTAGCGGTAGCTACCCGGCGGCCTTAAATTCCCCGC
ATAACTTCGGAGTCACGTTG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 434; Mature: 433

Protein sequence:

>434_residues
MADMAGPRAQGLTLDIAGRTLTVTHPDKVVFETHQGRPPISKLDLIEYYLAVADGALRGVADRPMILKRFVKGITEEAVF
QKRAPAKRPDYVDVAELKYASGTSAKEAVIHDAAGLAWAVNIGCVDLNPHPTRSGDLAHPDELRVDLDPMPGVDWQQIVA
VAMVAREVLEDHGLTAWPKTSGSRGFHIYARIEPRWPFKFVRLAAQTIAREVERRAPDLATSRWWKEEREGVFVDFNQNA
FDRTVASAYSVRATPDARVSTPLRWDEVPGCRPEAFTVATVPARYAEIGDPWESMDDHPGRLDALLDLADRLGPAEKAPR
GAKRQGAGATGRRQSVMPLIEIARTKTKDEALAALDTWRQRHPAAAERLQPPDVLVDGMRGPSSIWYRIRINLRHVPEEQ
RPPQEPLLADYSPWENYTGPQWASQSRHGPDTDR

Sequences:

>Translated_434_residues
MADMAGPRAQGLTLDIAGRTLTVTHPDKVVFETHQGRPPISKLDLIEYYLAVADGALRGVADRPMILKRFVKGITEEAVF
QKRAPAKRPDYVDVAELKYASGTSAKEAVIHDAAGLAWAVNIGCVDLNPHPTRSGDLAHPDELRVDLDPMPGVDWQQIVA
VAMVAREVLEDHGLTAWPKTSGSRGFHIYARIEPRWPFKFVRLAAQTIAREVERRAPDLATSRWWKEEREGVFVDFNQNA
FDRTVASAYSVRATPDARVSTPLRWDEVPGCRPEAFTVATVPARYAEIGDPWESMDDHPGRLDALLDLADRLGPAEKAPR
GAKRQGAGATGRRQSVMPLIEIARTKTKDEALAALDTWRQRHPAAAERLQPPDVLVDGMRGPSSIWYRIRINLRHVPEEQ
RPPQEPLLADYSPWENYTGPQWASQSRHGPDTDR
>Mature_433_residues
ADMAGPRAQGLTLDIAGRTLTVTHPDKVVFETHQGRPPISKLDLIEYYLAVADGALRGVADRPMILKRFVKGITEEAVFQ
KRAPAKRPDYVDVAELKYASGTSAKEAVIHDAAGLAWAVNIGCVDLNPHPTRSGDLAHPDELRVDLDPMPGVDWQQIVAV
AMVAREVLEDHGLTAWPKTSGSRGFHIYARIEPRWPFKFVRLAAQTIAREVERRAPDLATSRWWKEEREGVFVDFNQNAF
DRTVASAYSVRATPDARVSTPLRWDEVPGCRPEAFTVATVPARYAEIGDPWESMDDHPGRLDALLDLADRLGPAEKAPRG
AKRQGAGATGRRQSVMPLIEIARTKTKDEALAALDTWRQRHPAAAERLQPPDVLVDGMRGPSSIWYRIRINLRHVPEEQR
PPQEPLLADYSPWENYTGPQWASQSRHGPDTDR

Specific function: Unknown

COG id: COG3285

COG function: function code L; Predicted eukaryotic-type DNA primase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ATP-dependent DNA ligase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012309
- InterPro:   IPR012310
- InterPro:   IPR014146
- InterPro:   IPR002755
- InterPro:   IPR014144
- InterPro:   IPR014145
- InterPro:   IPR012340
- InterPro:   IPR016027 [H]

Pfam domain/function: PF04679 DNA_ligase_A_C; PF01068 DNA_ligase_A_M; PF01896 DNA_primase_S [H]

EC number: NA

Molecular weight: Translated: 48388; Mature: 48257

Theoretical pI: Translated: 6.92; Mature: 6.92

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MADMAGPRAQGLTLDIAGRTLTVTHPDKVVFETHQGRPPISKLDLIEYYLAVADGALRGV
CCCCCCCCCCCEEEEECCCEEEEECCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHCC
ADRPMILKRFVKGITEEAVFQKRAPAKRPDYVDVAELKYASGTSAKEAVIHDAAGLAWAV
CCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHEEECCCCCHHHHHHHHCCCEEEEE
NIGCVDLNPHPTRSGDLAHPDELRVDLDPMPGVDWQQIVAVAMVAREVLEDHGLTAWPKT
EEEEEECCCCCCCCCCCCCCCCCEEECCCCCCCCHHHHHHHHHHHHHHHHHCCCEECCCC
SGSRGFHIYARIEPRWPFKFVRLAAQTIAREVERRAPDLATSRWWKEEREGVFVDFNQNA
CCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCEEEECCCCH
FDRTVASAYSVRATPDARVSTPLRWDEVPGCRPEAFTVATVPARYAEIGDPWESMDDHPG
HHHHHHHHHEEECCCCCCCCCCCCCCCCCCCCCCCEEEEECCHHHHHCCCCHHHCCCCCC
RLDALLDLADRLGPAEKAPRGAKRQGAGATGRRQSVMPLIEIARTKTKDEALAALDTWRQ
HHHHHHHHHHHCCCHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHH
RHPAAAERLQPPDVLVDGMRGPSSIWYRIRINLRHVPEEQRPPQEPLLADYSPWENYTGP
HCCHHHHHCCCCHHEEECCCCCCEEEEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCC
QWASQSRHGPDTDR
CCCCCCCCCCCCCC
>Mature Secondary Structure 
ADMAGPRAQGLTLDIAGRTLTVTHPDKVVFETHQGRPPISKLDLIEYYLAVADGALRGV
CCCCCCCCCCEEEEECCCEEEEECCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHCC
ADRPMILKRFVKGITEEAVFQKRAPAKRPDYVDVAELKYASGTSAKEAVIHDAAGLAWAV
CCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHEEECCCCCHHHHHHHHCCCEEEEE
NIGCVDLNPHPTRSGDLAHPDELRVDLDPMPGVDWQQIVAVAMVAREVLEDHGLTAWPKT
EEEEEECCCCCCCCCCCCCCCCCEEECCCCCCCCHHHHHHHHHHHHHHHHHCCCEECCCC
SGSRGFHIYARIEPRWPFKFVRLAAQTIAREVERRAPDLATSRWWKEEREGVFVDFNQNA
CCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCEEEECCCCH
FDRTVASAYSVRATPDARVSTPLRWDEVPGCRPEAFTVATVPARYAEIGDPWESMDDHPG
HHHHHHHHHEEECCCCCCCCCCCCCCCCCCCCCCCEEEEECCHHHHHCCCCHHHCCCCCC
RLDALLDLADRLGPAEKAPRGAKRQGAGATGRRQSVMPLIEIARTKTKDEALAALDTWRQ
HHHHHHHHHHHCCCHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHH
RHPAAAERLQPPDVLVDGMRGPSSIWYRIRINLRHVPEEQRPPQEPLLADYSPWENYTGP
HCCHHHHHCCCCHHEEECCCCCCEEEEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCC
QWASQSRHGPDTDR
CCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]