| Definition | Mycobacterium sp. MCS chromosome, complete genome. |
|---|---|
| Accession | NC_008146 |
| Length | 5,705,448 |
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The map label for this gene is iciA [C]
Identifier: 108797334
GI number: 108797334
Start: 395740
End: 396654
Strand: Direct
Name: iciA [C]
Synonym: Mmcs_0354
Alternate gene names: 108797334
Gene position: 395740-396654 (Clockwise)
Preceding gene: 108797332
Following gene: 108797336
Centisome position: 6.94
GC content: 71.8
Gene sequence:
>915_bases GTGGCCACAGCCCATTCGCGGACGCGTGACGAGGTCCGCCTCGGCGCCGACCAACTGGCCGCCCTCGCGGCGGTGATCGA ATTCGGCAGCTTCGACGCGGCCGCCGAGCACCTGCATGTGACCCCGTCCGCGGTGAGCCAACGCATCAAGGCGCTCGAAC AGCGGGTCGGACAGGTTCTGGTGGTGCGCGAAAAGCCCTGTCGGGCAACAGCATCGGGCATACCACTGCTGCGCCTCGCG GCGCAGACCGCGCTGCTCGAGGCCGAAGCGCTCGGGGAGCTCGGCGGTCCGGGCGCCGCCCTGGTGCCGCGGGTGGCGGT GGCCGTCAACGCGGACTCCATGGCCACGTGGTTCACCGCCGTGCTGGGCGACGTCTCGGAGGTGTTGTTCGACATCCGGA TCGAGGATCAGGATCACTCCGCCCGGCTGCTGCGCGAAGGCGTGGTGATGGGGGCGGTCACCACCGAGCGCAGCCCGGTG CCCGGCTGCCGGGTGCAGTCCCTCGGGGTGATGCGGTACCTGCCCGTGGCGAGCGCGGGGTACGTCGAGCGGTATCTGCC CGACGGTTTCACCGCGGTCGCCGCGGCGCACGCGCCGTCGCTGGCCTGGAATCGCGATGATGCGTTACAGGACATGCTGA TCCGCCGGGCATTTCGCCGCGCGATCACCCGGCCGGTGCACTACGTGCCCACCGCGGAGGGGTTCGGCGCGGCGGTGCGC GCCGGGCTGGGCTGGGGGATGTACCCGGAGCAACTGGCCGTCCCCGAACTGGCCGGTGGTTCGCTCGTCCGGGTCGCCGA CGTGCATCTCGACGTGCCGTTGTACTGGCAGTGCTGGAAACTCGACAGCCCGCTGGTGGCGCGACTGACCGGCGCGGTCC GATCCGCGGCGGCCGGTCTGGCGCGGCGGCGATGA
Upstream 100 bases:
>100_bases TCGAAGAAGCGATCGAGGCGATTCATGGGACGAACCCTAAGGTGAACCACCGTCGACGGCGAATTACCACGGCGGGCGCC AGGAATCCTAGATTGGTTCG
Downstream 100 bases:
>100_bases CGATTTATACGCGCCCTCTGAGGATGAGGTTCCAGTAGGTGCGCGGCAGCACGTAGCGGTCGAACGCCCACGCCGTGCGG CGAGATTCGAGTGGGTCGAC
Product: chromosome replication initiation inhibitor protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 304; Mature: 303
Protein sequence:
>304_residues MATAHSRTRDEVRLGADQLAALAAVIEFGSFDAAAEHLHVTPSAVSQRIKALEQRVGQVLVVREKPCRATASGIPLLRLA AQTALLEAEALGELGGPGAALVPRVAVAVNADSMATWFTAVLGDVSEVLFDIRIEDQDHSARLLREGVVMGAVTTERSPV PGCRVQSLGVMRYLPVASAGYVERYLPDGFTAVAAAHAPSLAWNRDDALQDMLIRRAFRRAITRPVHYVPTAEGFGAAVR AGLGWGMYPEQLAVPELAGGSLVRVADVHLDVPLYWQCWKLDSPLVARLTGAVRSAAAGLARRR
Sequences:
>Translated_304_residues MATAHSRTRDEVRLGADQLAALAAVIEFGSFDAAAEHLHVTPSAVSQRIKALEQRVGQVLVVREKPCRATASGIPLLRLA AQTALLEAEALGELGGPGAALVPRVAVAVNADSMATWFTAVLGDVSEVLFDIRIEDQDHSARLLREGVVMGAVTTERSPV PGCRVQSLGVMRYLPVASAGYVERYLPDGFTAVAAAHAPSLAWNRDDALQDMLIRRAFRRAITRPVHYVPTAEGFGAAVR AGLGWGMYPEQLAVPELAGGSLVRVADVHLDVPLYWQCWKLDSPLVARLTGAVRSAAAGLARRR >Mature_303_residues ATAHSRTRDEVRLGADQLAALAAVIEFGSFDAAAEHLHVTPSAVSQRIKALEQRVGQVLVVREKPCRATASGIPLLRLAA QTALLEAEALGELGGPGAALVPRVAVAVNADSMATWFTAVLGDVSEVLFDIRIEDQDHSARLLREGVVMGAVTTERSPVP GCRVQSLGVMRYLPVASAGYVERYLPDGFTAVAAAHAPSLAWNRDDALQDMLIRRAFRRAITRPVHYVPTAEGFGAAVRA GLGWGMYPEQLAVPELAGGSLVRVADVHLDVPLYWQCWKLDSPLVARLTGAVRSAAAGLARRR
Specific function: Specific Inhibitor Of Chromosomal Initiation Of Replication In VItro. Binds The Three 13-Mers In The Origin (Oric) To Block Initiation Of Replication. [C]
COG id: COG0583
COG function: function code K; Transcriptional regulator
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 HTH lysR-type DNA-binding domain [H]
Homologues:
Organism=Escherichia coli, GI1789283, Length=280, Percent_Identity=36.4285714285714, Blast_Score=153, Evalue=1e-38,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000847 - InterPro: IPR005119 - InterPro: IPR017685 - InterPro: IPR011991 [H]
Pfam domain/function: PF00126 HTH_1; PF03466 LysR_substrate [H]
EC number: NA
Molecular weight: Translated: 32481; Mature: 32350
Theoretical pI: Translated: 8.11; Mature: 8.11
Prosite motif: PS50931 HTH_LYSR
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MATAHSRTRDEVRLGADQLAALAAVIEFGSFDAAAEHLHVTPSAVSQRIKALEQRVGQVL CCCCCCCCHHHHHHCHHHHHHHHHHHHHCCCHHHHHHEECCHHHHHHHHHHHHHHHCCEE VVREKPCRATASGIPLLRLAAQTALLEAEALGELGGPGAALVPRVAVAVNADSMATWFTA EEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHEEEEECCCHHHHHHHH VLGDVSEVLFDIRIEDQDHSARLLREGVVMGAVTTERSPVPGCRVQSLGVMRYLPVASAG HHHHHHHHHEEEEECCCCHHHHHHHCCHHEEEEECCCCCCCCCCHHHCCHHHHCCCCCCH YVERYLPDGFTAVAAAHAPSLAWNRDDALQDMLIRRAFRRAITRPVHYVPTAEGFGAAVR HHHHHCCCCHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEECCCCCCHHHHHH AGLGWGMYPEQLAVPELAGGSLVRVADVHLDVPLYWQCWKLDSPLVARLTGAVRSAAAGL HCCCCCCCHHHHCCCCCCCCCEEEEEEEEECCCCEEEEEECCCHHHHHHHHHHHHHHHHH ARRR HCCC >Mature Secondary Structure ATAHSRTRDEVRLGADQLAALAAVIEFGSFDAAAEHLHVTPSAVSQRIKALEQRVGQVL CCCCCCCHHHHHHCHHHHHHHHHHHHHCCCHHHHHHEECCHHHHHHHHHHHHHHHCCEE VVREKPCRATASGIPLLRLAAQTALLEAEALGELGGPGAALVPRVAVAVNADSMATWFTA EEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHEEEEECCCHHHHHHHH VLGDVSEVLFDIRIEDQDHSARLLREGVVMGAVTTERSPVPGCRVQSLGVMRYLPVASAG HHHHHHHHHEEEEECCCCHHHHHHHCCHHEEEEECCCCCCCCCCHHHCCHHHHCCCCCCH YVERYLPDGFTAVAAAHAPSLAWNRDDALQDMLIRRAFRRAITRPVHYVPTAEGFGAAVR HHHHHCCCCHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEECCCCCCHHHHHH AGLGWGMYPEQLAVPELAGGSLVRVADVHLDVPLYWQCWKLDSPLVARLTGAVRSAAAGL HCCCCCCCHHHHCCCCCCCCCEEEEEEEEECCCCEEEEEECCCHHHHHHHHHHHHHHHHH ARRR HCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]