| Definition | Mycobacterium sp. MCS chromosome, complete genome. |
|---|---|
| Accession | NC_008146 |
| Length | 5,705,448 |
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The map label for this gene is 108797322
Identifier: 108797322
GI number: 108797322
Start: 378565
End: 379137
Strand: Direct
Name: 108797322
Synonym: Mmcs_0342
Alternate gene names: NA
Gene position: 378565-379137 (Clockwise)
Preceding gene: 108797320
Following gene: 108797323
Centisome position: 6.64
GC content: 72.08
Gene sequence:
>573_bases GTGGGTGTGTGGCGGACGGTGTGCCGGGTCAGCGTGGCGGTGGGCTGCGCCTGCGGTGTGCTGTTCGGCGCCGCGCCGTC CCACGCGGACCCCGCCGAACCCGGCGTTGACACCCTGGTAGGGCCCGCGGCGACCGACACCTTCGGCGGATACCTCCCCG AAGACGGGACGCTGACCGCCTTCGACGTCGAGAATCCGATCGTCGGCAGGCTCGATCCCGCACTGCTGGCGGCCGTGCAG GAGGCCAGCCGCGCGGCGGCCGCCGACGGCGTCGAGGTCGAGATCAACTCCGGTTGGCGCTCGATCGGGTTCCAGGAGCG GCTGTTCGAGGACGGGGTGCGCACCTACGGCAGCGTGGAGGTCGCCCGGCAGTTCGTCGCGTCACCGCAGACGTCGATGC ACGTGGTCGGGCGGGCGGTGGACGTCGGCGGACCGGGCGCGGCGGCGTGGATGTCGCGCAACGGCCCACGGTTCGGACTG TGTCAGGTGTACGCCAACGAGCTGTGGCACTACGAGTTGACCGCGGACGCCAACGGCGCCTGCCCGCCGATGAAACCGAA CGCGACCGGCTGA
Upstream 100 bases:
>100_bases GGACCGGGAGCGGGCGGCACCGATCGGCTGTGGTCCCGGCGGCATGGGAGAGATCGTAATCCGGTCGCGCGGTGCAGGCC GAAGCTGGCATGGTGGCGGG
Downstream 100 bases:
>100_bases CAGCCGGGAATGTCGTTCTCACGCTCGGTAACATGATGGCCGTGTCGGGAGAAGACGCGGTGACCACCGGTGTCGCGGGT TCTCTGATCCTGACGTCGGA
Product: peptidase M15B and M15C, D,D-carboxypeptidase VanY/endolysins
Products: NA
Alternate protein names: D-Alanyl-D-Alanine Carboxypeptidase; VanY-Type Carboxypeptidase; D-Alanyl-D-Alanine Carboxypeptidase Family Protein; M15 Family Peptidase
Number of amino acids: Translated: 190; Mature: 189
Protein sequence:
>190_residues MGVWRTVCRVSVAVGCACGVLFGAAPSHADPAEPGVDTLVGPAATDTFGGYLPEDGTLTAFDVENPIVGRLDPALLAAVQ EASRAAAADGVEVEINSGWRSIGFQERLFEDGVRTYGSVEVARQFVASPQTSMHVVGRAVDVGGPGAAAWMSRNGPRFGL CQVYANELWHYELTADANGACPPMKPNATG
Sequences:
>Translated_190_residues MGVWRTVCRVSVAVGCACGVLFGAAPSHADPAEPGVDTLVGPAATDTFGGYLPEDGTLTAFDVENPIVGRLDPALLAAVQ EASRAAAADGVEVEINSGWRSIGFQERLFEDGVRTYGSVEVARQFVASPQTSMHVVGRAVDVGGPGAAAWMSRNGPRFGL CQVYANELWHYELTADANGACPPMKPNATG >Mature_189_residues GVWRTVCRVSVAVGCACGVLFGAAPSHADPAEPGVDTLVGPAATDTFGGYLPEDGTLTAFDVENPIVGRLDPALLAAVQE ASRAAAADGVEVEINSGWRSIGFQERLFEDGVRTYGSVEVARQFVASPQTSMHVVGRAVDVGGPGAAAWMSRNGPRFGLC QVYANELWHYELTADANGACPPMKPNATG
Specific function: Unknown
COG id: COG1876
COG function: function code M; D-alanyl-D-alanine carboxypeptidase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19765; Mature: 19634
Theoretical pI: Translated: 4.42; Mature: 4.42
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.6 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 2.6 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGVWRTVCRVSVAVGCACGVLFGAAPSHADPAEPGVDTLVGPAATDTFGGYLPEDGTLTA CCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCEEE FDVENPIVGRLDPALLAAVQEASRAAAADGVEVEINSGWRSIGFQERLFEDGVRTYGSVE EECCCCCCCCCCHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCHHHHHHHHHHHHCCHHH VARQFVASPQTSMHVVGRAVDVGGPGAAAWMSRNGPRFGLCQVYANELWHYELTADANGA HHHHHHHCCCCHHHHHHEEEECCCCCHHHHHCCCCCCCHHHHHHHHHHEEEEEECCCCCC CPPMKPNATG CCCCCCCCCC >Mature Secondary Structure GVWRTVCRVSVAVGCACGVLFGAAPSHADPAEPGVDTLVGPAATDTFGGYLPEDGTLTA CHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCEEE FDVENPIVGRLDPALLAAVQEASRAAAADGVEVEINSGWRSIGFQERLFEDGVRTYGSVE EECCCCCCCCCCHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCHHHHHHHHHHHHCCHHH VARQFVASPQTSMHVVGRAVDVGGPGAAAWMSRNGPRFGLCQVYANELWHYELTADANGA HHHHHHHCCCCHHHHHHEEEECCCCCHHHHHCCCCCCCHHHHHHHHHHEEEEEECCCCCC CPPMKPNATG CCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA