Definition Mycobacterium sp. MCS chromosome, complete genome.
Accession NC_008146
Length 5,705,448

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The map label for this gene is 108797322

Identifier: 108797322

GI number: 108797322

Start: 378565

End: 379137

Strand: Direct

Name: 108797322

Synonym: Mmcs_0342

Alternate gene names: NA

Gene position: 378565-379137 (Clockwise)

Preceding gene: 108797320

Following gene: 108797323

Centisome position: 6.64

GC content: 72.08

Gene sequence:

>573_bases
GTGGGTGTGTGGCGGACGGTGTGCCGGGTCAGCGTGGCGGTGGGCTGCGCCTGCGGTGTGCTGTTCGGCGCCGCGCCGTC
CCACGCGGACCCCGCCGAACCCGGCGTTGACACCCTGGTAGGGCCCGCGGCGACCGACACCTTCGGCGGATACCTCCCCG
AAGACGGGACGCTGACCGCCTTCGACGTCGAGAATCCGATCGTCGGCAGGCTCGATCCCGCACTGCTGGCGGCCGTGCAG
GAGGCCAGCCGCGCGGCGGCCGCCGACGGCGTCGAGGTCGAGATCAACTCCGGTTGGCGCTCGATCGGGTTCCAGGAGCG
GCTGTTCGAGGACGGGGTGCGCACCTACGGCAGCGTGGAGGTCGCCCGGCAGTTCGTCGCGTCACCGCAGACGTCGATGC
ACGTGGTCGGGCGGGCGGTGGACGTCGGCGGACCGGGCGCGGCGGCGTGGATGTCGCGCAACGGCCCACGGTTCGGACTG
TGTCAGGTGTACGCCAACGAGCTGTGGCACTACGAGTTGACCGCGGACGCCAACGGCGCCTGCCCGCCGATGAAACCGAA
CGCGACCGGCTGA

Upstream 100 bases:

>100_bases
GGACCGGGAGCGGGCGGCACCGATCGGCTGTGGTCCCGGCGGCATGGGAGAGATCGTAATCCGGTCGCGCGGTGCAGGCC
GAAGCTGGCATGGTGGCGGG

Downstream 100 bases:

>100_bases
CAGCCGGGAATGTCGTTCTCACGCTCGGTAACATGATGGCCGTGTCGGGAGAAGACGCGGTGACCACCGGTGTCGCGGGT
TCTCTGATCCTGACGTCGGA

Product: peptidase M15B and M15C, D,D-carboxypeptidase VanY/endolysins

Products: NA

Alternate protein names: D-Alanyl-D-Alanine Carboxypeptidase; VanY-Type Carboxypeptidase; D-Alanyl-D-Alanine Carboxypeptidase Family Protein; M15 Family Peptidase

Number of amino acids: Translated: 190; Mature: 189

Protein sequence:

>190_residues
MGVWRTVCRVSVAVGCACGVLFGAAPSHADPAEPGVDTLVGPAATDTFGGYLPEDGTLTAFDVENPIVGRLDPALLAAVQ
EASRAAAADGVEVEINSGWRSIGFQERLFEDGVRTYGSVEVARQFVASPQTSMHVVGRAVDVGGPGAAAWMSRNGPRFGL
CQVYANELWHYELTADANGACPPMKPNATG

Sequences:

>Translated_190_residues
MGVWRTVCRVSVAVGCACGVLFGAAPSHADPAEPGVDTLVGPAATDTFGGYLPEDGTLTAFDVENPIVGRLDPALLAAVQ
EASRAAAADGVEVEINSGWRSIGFQERLFEDGVRTYGSVEVARQFVASPQTSMHVVGRAVDVGGPGAAAWMSRNGPRFGL
CQVYANELWHYELTADANGACPPMKPNATG
>Mature_189_residues
GVWRTVCRVSVAVGCACGVLFGAAPSHADPAEPGVDTLVGPAATDTFGGYLPEDGTLTAFDVENPIVGRLDPALLAAVQE
ASRAAAADGVEVEINSGWRSIGFQERLFEDGVRTYGSVEVARQFVASPQTSMHVVGRAVDVGGPGAAAWMSRNGPRFGLC
QVYANELWHYELTADANGACPPMKPNATG

Specific function: Unknown

COG id: COG1876

COG function: function code M; D-alanyl-D-alanine carboxypeptidase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19765; Mature: 19634

Theoretical pI: Translated: 4.42; Mature: 4.42

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.6 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
2.6 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGVWRTVCRVSVAVGCACGVLFGAAPSHADPAEPGVDTLVGPAATDTFGGYLPEDGTLTA
CCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCEEE
FDVENPIVGRLDPALLAAVQEASRAAAADGVEVEINSGWRSIGFQERLFEDGVRTYGSVE
EECCCCCCCCCCHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCHHHHHHHHHHHHCCHHH
VARQFVASPQTSMHVVGRAVDVGGPGAAAWMSRNGPRFGLCQVYANELWHYELTADANGA
HHHHHHHCCCCHHHHHHEEEECCCCCHHHHHCCCCCCCHHHHHHHHHHEEEEEECCCCCC
CPPMKPNATG
CCCCCCCCCC
>Mature Secondary Structure 
GVWRTVCRVSVAVGCACGVLFGAAPSHADPAEPGVDTLVGPAATDTFGGYLPEDGTLTA
CHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCEEE
FDVENPIVGRLDPALLAAVQEASRAAAADGVEVEINSGWRSIGFQERLFEDGVRTYGSVE
EECCCCCCCCCCHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCHHHHHHHHHHHHCCHHH
VARQFVASPQTSMHVVGRAVDVGGPGAAAWMSRNGPRFGLCQVYANELWHYELTADANGA
HHHHHHHCCCCHHHHHHEEEECCCCCHHHHHCCCCCCCHHHHHHHHHHEEEEEECCCCCC
CPPMKPNATG
CCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA