Definition | Mycobacterium sp. MCS chromosome, complete genome. |
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Accession | NC_008146 |
Length | 5,705,448 |
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The map label for this gene is 108797270
Identifier: 108797270
GI number: 108797270
Start: 328309
End: 328731
Strand: Direct
Name: 108797270
Synonym: Mmcs_0290
Alternate gene names: NA
Gene position: 328309-328731 (Clockwise)
Preceding gene: 108797269
Following gene: 108797271
Centisome position: 5.75
GC content: 68.56
Gene sequence:
>423_bases GTGCTGGGTGCGGTGTTGGCGTTGGCGGCGGTGCTGTCGCCGCCGGCGGCGCACGCCGAGACGCCGTACGGCAACTTCGA GATGCAGATCCAGGGCAGGTACGACTTCCACACCTGGCTGTGGGCGGTGTCGCGGTGCCCGGGTGAGTGTCTACGGGTGC AGGCGATCGCGCAGCCCGTCGCCAAGGCGTTCGCGTTCCGGGCGGATGCCCACCTGGTCGACGGACGCTACACCATGACC GTCGACGTGCCCGACGGATTGCGTTGCGGCAACGTCTACTACGGTCCGGTGATCCCCACCCGTGACGTGTACACCTGGGA CGACGCAACCCGGTCGGGAACGCTGTCCTCGTCTTTCGCCACCGGATGTGACGGCGCGCCCGGTGGGACCCTGACCTACC CGTTCCGGCTGGTTCGCCTGTAG
Upstream 100 bases:
>100_bases ACAACAACAAGTGCATGGTGACGGTGTTCGGCAAGACGCACTGCGTGCTGGACCCGGGTCAGCGCTACGGACCGGTGGTG AGCCAGTCGTGAGGAGCGCA
Downstream 100 bases:
>100_bases AAAGCACTGCATGCGAATCGGTGTGTCCACGCCAGTGGTCGTCCAGGTGCCCGGGGTGGCCGCGGAGTGGGAGCGGGACG CCGGGATCGAGGACCTGCGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 140; Mature: 140
Protein sequence:
>140_residues MLGAVLALAAVLSPPAAHAETPYGNFEMQIQGRYDFHTWLWAVSRCPGECLRVQAIAQPVAKAFAFRADAHLVDGRYTMT VDVPDGLRCGNVYYGPVIPTRDVYTWDDATRSGTLSSSFATGCDGAPGGTLTYPFRLVRL
Sequences:
>Translated_140_residues MLGAVLALAAVLSPPAAHAETPYGNFEMQIQGRYDFHTWLWAVSRCPGECLRVQAIAQPVAKAFAFRADAHLVDGRYTMT VDVPDGLRCGNVYYGPVIPTRDVYTWDDATRSGTLSSSFATGCDGAPGGTLTYPFRLVRL >Mature_140_residues MLGAVLALAAVLSPPAAHAETPYGNFEMQIQGRYDFHTWLWAVSRCPGECLRVQAIAQPVAKAFAFRADAHLVDGRYTMT VDVPDGLRCGNVYYGPVIPTRDVYTWDDATRSGTLSSSFATGCDGAPGGTLTYPFRLVRL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15187; Mature: 15187
Theoretical pI: Translated: 6.76; Mature: 6.76
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.9 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 2.9 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 5.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLGAVLALAAVLSPPAAHAETPYGNFEMQIQGRYDFHTWLWAVSRCPGECLRVQAIAQPV CHHHHHHHHHHHCCCCCCCCCCCCCEEEEEECCCCHHHHHHHHHCCCHHHHHHHHHHHHH AKAFAFRADAHLVDGRYTMTVDVPDGLRCGNVYYGPVIPTRDVYTWDDATRSGTLSSSFA HHHHHHCCCCEEECCEEEEEEECCCCCEECCEEECCCCCCCCEEECCCCCCCCCCCCCCC TGCDGAPGGTLTYPFRLVRL CCCCCCCCCEEECCEEEEEC >Mature Secondary Structure MLGAVLALAAVLSPPAAHAETPYGNFEMQIQGRYDFHTWLWAVSRCPGECLRVQAIAQPV CHHHHHHHHHHHCCCCCCCCCCCCCEEEEEECCCCHHHHHHHHHCCCHHHHHHHHHHHHH AKAFAFRADAHLVDGRYTMTVDVPDGLRCGNVYYGPVIPTRDVYTWDDATRSGTLSSSFA HHHHHHCCCCEEECCEEEEEEECCCCCEECCEEECCCCCCCCEEECCCCCCCCCCCCCCC TGCDGAPGGTLTYPFRLVRL CCCCCCCCCEEECCEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA