Click here to switch to the map view.

The map label for this gene is 108797234

Identifier: 108797234

GI number: 108797234

Start: 294938

End: 295756

Strand: Reverse

Name: 108797234

Synonym: Mmcs_0254

Alternate gene names: NA

Gene position: 295756-294938 (Counterclockwise)

Preceding gene: 108797235

Following gene: 108797233

Centisome position: 5.18

GC content: 64.1

Gene sequence:

>819_bases
GTGAGCGCACCGACCGCAGACCGCGAGGGCACCGGCGTCTACTCCGCCGGCCGCGCCAAGATCCCGCAGCGGACCTTGCG
CACCGACCGTTGGTGGGTGCCGTCGCTGTTGACCAACCTCGGCCTGGCCGCGTTCGTCGTCTACGCGACGATCCGGGCGT
TCTGGGGCAGCGCCTACTGGGTGGCCGACTACCACTACCTGACGCCGTTCTACTCACCGTGTGTCAGCAAGGGCTGCATC
CCGGAGGCCAGCCACTTCGGCCAGATTCTGCCCGACGTCTGGTGGCTTCCGTACGCGGCGTTCTCGCTGCCGTTCCTGCT
GCTGTTCCGGCTGACCTGTTACTACTACCGCAAGGCCTACTACCGCTCGGTGTGGCAGTCGCCCCCGGGATGCGCTGTGG
CCGAACCGCATTCGACCTACACCGGTGAGACCAAGCTGCCGCTCATCATGCAGAACCTGCACCGCTACTTCTTCTACGTC
GCCGTGCTCATCTCGCTGATCAACACCTGGGACGCGATCCTGGCGTTCCACTCCCCCAGCGGATTCGGCTTCGGACTCGG
CAACGTCATCCTCGTCGTCAACGTGGTGCTGTTGTGGACCTACACGATCTCCTGCCACTCCTGCCGGCACGTCACCGGCG
GCCGCCTCAAGCACTTCTCCAAACACCCGGTCCGGTACTGGATGTGGACTCAGATCAGCAAGCTCAACACCAGGCACATG
CAGTTCGCGTGGATCACGCTGGGCACCCTGGTGCTGACCGACTTCTACGTCATGCTGGTCGCCAGCGGCACCATCTCCGA
CCTGAGATTCATTGGCTGA

Upstream 100 bases:

>100_bases
TGAGCGGTCGCGGGCGGCCCGCCGCCCGCACCACCACCGGCGTGACAGCGCCGACCGCGGGTTACCGCATGCCCTCCCCA
CCGATACCCGAAAGGCAACC

Downstream 100 bases:

>100_bases
GTAGTGATTTCACACACGCACGAAACGACGAGTGAGGTTTGATGGCGGCGAGCGACCCCCGACCCGGCGACTCCAGCGGT
ATCGAGAGACACCAGTACGA

Product: putative succinate dehydrogenase membrane anchor subunit

Products: NA

Alternate protein names: Succinate Dehydrogenase; Succinate Dehydrogenase Membrane Anchor Subunit

Number of amino acids: Translated: 272; Mature: 271

Protein sequence:

>272_residues
MSAPTADREGTGVYSAGRAKIPQRTLRTDRWWVPSLLTNLGLAAFVVYATIRAFWGSAYWVADYHYLTPFYSPCVSKGCI
PEASHFGQILPDVWWLPYAAFSLPFLLLFRLTCYYYRKAYYRSVWQSPPGCAVAEPHSTYTGETKLPLIMQNLHRYFFYV
AVLISLINTWDAILAFHSPSGFGFGLGNVILVVNVVLLWTYTISCHSCRHVTGGRLKHFSKHPVRYWMWTQISKLNTRHM
QFAWITLGTLVLTDFYVMLVASGTISDLRFIG

Sequences:

>Translated_272_residues
MSAPTADREGTGVYSAGRAKIPQRTLRTDRWWVPSLLTNLGLAAFVVYATIRAFWGSAYWVADYHYLTPFYSPCVSKGCI
PEASHFGQILPDVWWLPYAAFSLPFLLLFRLTCYYYRKAYYRSVWQSPPGCAVAEPHSTYTGETKLPLIMQNLHRYFFYV
AVLISLINTWDAILAFHSPSGFGFGLGNVILVVNVVLLWTYTISCHSCRHVTGGRLKHFSKHPVRYWMWTQISKLNTRHM
QFAWITLGTLVLTDFYVMLVASGTISDLRFIG
>Mature_271_residues
SAPTADREGTGVYSAGRAKIPQRTLRTDRWWVPSLLTNLGLAAFVVYATIRAFWGSAYWVADYHYLTPFYSPCVSKGCIP
EASHFGQILPDVWWLPYAAFSLPFLLLFRLTCYYYRKAYYRSVWQSPPGCAVAEPHSTYTGETKLPLIMQNLHRYFFYVA
VLISLINTWDAILAFHSPSGFGFGLGNVILVVNVVLLWTYTISCHSCRHVTGGRLKHFSKHPVRYWMWTQISKLNTRHMQ
FAWITLGTLVLTDFYVMLVASGTISDLRFIG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 31108; Mature: 30977

Theoretical pI: Translated: 9.58; Mature: 9.58

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCC
>Mature Secondary Structure 
SAPTADREGTGVYSAGRAKIPQRTLRTDRWWVPSLLTNLGLAAFVVYATIRAFWGSAYW
CCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCEEE
VADYHYLTPFYSPCVSKGCIPEASHFGQILPDVWWLPYAAFSLPFLLLFRLTCYYYRKAY
EECHHHHCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
YRSVWQSPPGCAVAEPHSTYTGETKLPLIMQNLHRYFFYVAVLISLINTWDAILAFHSPS
HHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCC
GFGFGLGNVILVVNVVLLWTYTISCHSCRHVTGGRLKHFSKHPVRYWMWTQISKLNTRHM
CCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHCCCCCHHHHHHHHHHCCCHHH
QFAWITLGTLVLTDFYVMLVASGTISDLRFIG
HHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA